Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:19:28 (765224): wrapper (7.7.26015): starting
08:19:28 (765224): wrapper: running run_atlas (--nthreads 4)
[2026-02-09 08:19:28] Arguments: --nthreads 4
[2026-02-09 08:19:28] Threads: 4
[2026-02-09 08:19:28] Checking for CVMFS
[2026-02-09 08:19:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 08:19:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 08:19:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 08:19:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 08:19:29] 2.9.2.0 3021 4247 94196 156048 2 50 25035245 36864001 0 130560 0 2140627 99.987 156366 9762 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 08:19:29] CVMFS is ok
[2026-02-09 08:19:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 08:19:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 08:19:29] Further information can be found at the LHC@home message board.
[2026-02-09 08:19:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 08:19:29] Checking for apptainer binary...
[2026-02-09 08:19:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 08:19:29] Running /usr/bin/apptainer --version
[2026-02-09 08:19:29] apptainer version 1.4.1-1.1
[2026-02-09 08:19:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 08:19:29] thA334
[2026-02-09 08:19:29] apptainer works
[2026-02-09 08:19:29] Set ATHENA_PROC_NUMBER=4
[2026-02-09 08:19:29] Set ATHENA_CORE_NUMBER=4
[2026-02-09 08:19:29] Starting ATLAS job with PandaID=7005400485
[2026-02-09 08:19:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 09:26:09]  *** The last 200 lines of the pilot log: ***
[2026-02-09 09:26:09] 2026-02-09 08:25:37,894 | INFO     | did not find any defunct processes belonging to 773861
[2026-02-09 09:26:09] 2026-02-09 08:25:37,895 | INFO     | did not find any defunct processes belonging to 773861
[2026-02-09 09:26:09] 2026-02-09 08:25:37,895 | INFO     | ready for new job
[2026-02-09 09:26:09] 2026-02-09 08:25:37,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 09:26:09] 2026-02-09 08:25:37,896 | INFO     | **************************************
[2026-02-09 09:26:09] 2026-02-09 08:25:37,896 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 09:26:09] 2026-02-09 08:25:37,896 | INFO     | **************************************
[2026-02-09 09:26:09] 2026-02-09 08:25:37,896 | INFO     | 
[2026-02-09 09:26:09] 2026-02-09 08:25:37,896 | INFO     | architecture information:
[2026-02-09 09:26:09] 2026-02-09 08:25:37,896 | INFO     | executing command: cat /etc/os-release
[2026-02-09 09:26:09] 2026-02-09 08:25:37,909 | INFO     | cat /etc/os-release:
[2026-02-09 09:26:09] NAME="CentOS Linux"
[2026-02-09 09:26:09] VERSION="7 (Core)"
[2026-02-09 09:26:09] ID="centos"
[2026-02-09 09:26:09] ID_LIKE="rhel fedora"
[2026-02-09 09:26:09] VERSION_ID="7"
[2026-02-09 09:26:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 09:26:09] ANSI_COLOR="0;31"
[2026-02-09 09:26:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 09:26:09] HOME_URL="https://www.centos.org/"
[2026-02-09 09:26:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 09:26:09] 
[2026-02-09 09:26:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 09:26:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 09:26:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 09:26:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 09:26:09] 
[2026-02-09 09:26:09] 2026-02-09 08:25:37,909 | INFO     | **************************************
[2026-02-09 09:26:09] 2026-02-09 08:25:38,413 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-09 09:26:09] 2026-02-09 08:25:38,429 | INFO     | sufficient remaining disk space (229925453824 B)
[2026-02-09 09:26:09] 2026-02-09 08:25:38,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 09:26:09] 2026-02-09 08:25:38,430 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 09:26:09] 2026-02-09 08:25:38,430 | INFO     | update_server=False
[2026-02-09 09:26:09] 2026-02-09 08:25:38,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 09:26:09] 2026-02-09 08:25:38,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 09:26:09] 2026-02-09 08:25:38,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 09:26:09] 2026-02-09 08:25:38,430 | INFO     | aborting loop
[2026-02-09 09:26:09] 2026-02-09 08:25:38,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 09:26:09] 2026-02-09 08:25:38,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 09:26:09] 2026-02-09 08:25:38,528 | INFO     | all data control threads have been joined
[2026-02-09 09:26:09] 2026-02-09 08:25:38,570 | INFO     | all payload control threads have been joined
[2026-02-09 09:26:09] 2026-02-09 08:25:39,436 | INFO     | [job] retrieve thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:39,436 | INFO     | [job] job monitor thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:39,436 | INFO     | [job] queue monitor thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:39,533 | INFO     | [data] control thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:39,576 | INFO     | [payload] control thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:39,775 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:39,817 | INFO     | all job control threads have been joined
[2026-02-09 09:26:09] 2026-02-09 08:25:39,898 | INFO     | [payload] failed_post thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:40,263 | INFO     | [job] validate thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:40,313 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:40,386 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:40,400 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:40,413 | INFO     | [payload] validate_post thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:40,436 | INFO     | [data] copytool_out thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:40,544 | INFO     | [data] copytool_in thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:40,823 | INFO     | [job] control thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:42,437 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 09:26:09] 2026-02-09 08:25:45,400 | INFO     | [monitor] cgroup control has ended
[2026-02-09 09:26:09] 2026-02-09 08:25:45,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951154530112)>', '<ExcThread(monitor, started 139950276200192)>']
[2026-02-09 09:26:09] 2026-02-09 08:25:50,873 | INFO     | all workflow threads have been joined
[2026-02-09 09:26:09] 2026-02-09 08:25:50,873 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 09:26:09] 2026-02-09 08:25:50,874 | INFO     | traces error code: 0
[2026-02-09 09:26:09] 2026-02-09 08:25:50,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 09:26:09] 2026-02-09 08:26:09,055 | INFO     | PID=769345 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 09:26:09] 2026-02-09 08:26:09,056 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 09:26:09] 2026-02-09 08:26:09,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 09:26:09] 2026-02-09 08:26:09,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 09:26:09] 2026-02-09 08:26:09,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 09:26:09] 2026-02-09 08:26:09,056 | INFO     | [monitor] control thread has ended
[2026-02-09 09:26:09] 2026-02-09 08:26:09,119 [wrapper] ==== pilot stdout END ====
[2026-02-09 09:26:09] 2026-02-09 08:26:09,123 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 09:26:09] 2026-02-09 08:26:09,127 [wrapper] pilotpid: 769345
[2026-02-09 09:26:09] 2026-02-09 08:26:09,131 [wrapper] Pilot exit status: 0
[2026-02-09 09:26:09] 2026-02-09 08:26:09,141 [wrapper] pandaids: 7005400485
[2026-02-09 09:26:09] 2026-02-09 08:26:09,162 [wrapper] cleanup supervisor_pilot  778864 769346
[2026-02-09 09:26:09] 2026-02-09 08:26:09,166 [wrapper] Test setup, not cleaning
[2026-02-09 09:26:09] 2026-02-09 08:26:09,169 [wrapper] apfmon messages muted
[2026-02-09 09:26:09] 2026-02-09 08:26:09,172 [wrapper] ==== wrapper stdout END ====
[2026-02-09 09:26:09] 2026-02-09 08:26:09,176 [wrapper] ==== wrapper stderr END ====
[2026-02-09 09:26:09]  *** Error codes and diagnostics ***
[2026-02-09 09:26:09]     "exeErrorCode": 0,
[2026-02-09 09:26:09]     "exeErrorDiag": "",
[2026-02-09 09:26:09]     "pilotErrorCode": 0,
[2026-02-09 09:26:09]     "pilotErrorDiag": "",
[2026-02-09 09:26:09]  *** Listing of results directory ***
[2026-02-09 09:26:09] total 673772
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc    584627 Feb  8 15:16 pilot3.tar.gz
[2026-02-09 09:26:09] -rwx------ 1 boinc boinc     36322 Feb  8 15:16 runpilot2-wrapper.sh
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc      5111 Feb  8 15:16 queuedata.json
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc       100 Feb  9 08:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 09:26:09] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 08:19 run_atlas
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc       105 Feb  9 08:19 job.xml
[2026-02-09 09:26:09] -rw-r--r-- 2 boinc boinc 499986671 Feb  9 08:19 EVNT.48310747._000171.pool.root.1
[2026-02-09 09:26:09] -rw-r--r-- 2 boinc boinc    597948 Feb  9 08:19 input.tar.gz
[2026-02-09 09:26:09] -rw-r--r-- 2 boinc boinc     15845 Feb  9 08:19 start_atlas.sh
[2026-02-09 09:26:09] drwxrwx--x 2 boinc boinc      4096 Feb  9 08:19 shared
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc         0 Feb  9 08:19 boinc_setup_complete
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc      6369 Feb  9 08:19 init_data.xml
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc         0 Feb  9 08:19 boinc_lockfile
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc      2523 Feb  9 08:19 pandaJob.out
[2026-02-09 09:26:09] -rw------- 1 boinc boinc   1009488 Feb  9 08:19 agis_schedconf.cvmfs.json
[2026-02-09 09:26:09] -rw------- 1 boinc boinc   1513088 Feb  9 08:19 agis_ddmendpoints.agis.ALL.json
[2026-02-09 09:26:09] -rw------- 1 boinc boinc       427 Feb  9 08:19 workernode_map.json
[2026-02-09 09:26:09] drwx------ 5 boinc boinc      4096 Feb  9 08:19 pilot3
[2026-02-09 09:26:09] -rw------- 1 boinc boinc 184278838 Feb  9 09:25 HITS.48310749._009064.pool.root.1
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc       530 Feb  9 09:25 boinc_task_state.xml
[2026-02-09 09:26:09] -rw------- 1 boinc boinc      1027 Feb  9 09:25 memory_monitor_summary.json
[2026-02-09 09:26:09] -rw------- 1 boinc boinc    285992 Feb  9 09:25 log.48310749._009064.job.log.tgz.1
[2026-02-09 09:26:09] -rw------- 1 boinc boinc      6316 Feb  9 09:25 heartbeat.json
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc      8192 Feb  9 09:25 boinc_mmap_file
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc        27 Feb  9 09:25 wrapper_checkpoint.txt
[2026-02-09 09:26:09] -rw------- 1 boinc boinc       746 Feb  9 09:26 pilotlog.txt
[2026-02-09 09:26:09] -rw------- 1 boinc boinc        95 Feb  9 09:26 pilot_heartbeat.json
[2026-02-09 09:26:09] -rw------- 1 boinc boinc    590275 Feb  9 09:26 log.48310749._009064.job.log.1
[2026-02-09 09:26:09] -rw------- 1 boinc boinc       357 Feb  9 09:26 output.list
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc       620 Feb  9 09:26 runtime_log
[2026-02-09 09:26:09] -rw------- 1 boinc boinc    890880 Feb  9 09:26 result.tar.gz
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc      8896 Feb  9 09:26 runtime_log.err
[2026-02-09 09:26:09] -rw------- 1 boinc boinc       657 Feb  9 09:26 6tyKDmSlK98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzndKDmYmTGPo.diag
[2026-02-09 09:26:09] -rw-r--r-- 1 boinc boinc      9743 Feb  9 09:26 stderr.txt
[2026-02-09 09:26:09] HITS file was successfully produced:
[2026-02-09 09:26:09] -rw------- 1 boinc boinc 184278838 Feb  9 09:25 shared/HITS.pool.root.1
[2026-02-09 09:26:09]  *** Contents of shared directory: ***
[2026-02-09 09:26:09] total 669712
[2026-02-09 09:26:09] -rw-r--r-- 2 boinc boinc 499986671 Feb  9 08:19 ATLAS.root_0
[2026-02-09 09:26:09] -rw-r--r-- 2 boinc boinc    597948 Feb  9 08:19 input.tar.gz
[2026-02-09 09:26:09] -rw-r--r-- 2 boinc boinc     15845 Feb  9 08:19 start_atlas.sh
[2026-02-09 09:26:09] -rw------- 1 boinc boinc 184278838 Feb  9 09:25 HITS.pool.root.1
[2026-02-09 09:26:09] -rw------- 1 boinc boinc    890880 Feb  9 09:26 result.tar.gz
09:26:11 (765224): run_atlas exited; CPU time 14872.999101
09:26:11 (765224): called boinc_finish(0)

</stderr_txt>
]]>

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