Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:06 (4025471): wrapper (7.7.26015): starting
05:43:06 (4025471): wrapper: running run_atlas (--nthreads 12)
[2026-02-09 05:43:06] Arguments: --nthreads 12
[2026-02-09 05:43:06] Threads: 12
[2026-02-09 05:43:06] Checking for CVMFS
[2026-02-09 05:43:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 05:43:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 05:43:07] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 05:43:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 05:43:08] 2.13.3.0 4191 16128 225216 156044 2 452 37313974 46080001 18449 130560 0 80280298 99.863 33890773 19561 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-02-09 05:43:08] CVMFS is ok
[2026-02-09 05:43:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 05:43:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 05:43:08] Further information can be found at the LHC@home message board.
[2026-02-09 05:43:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 05:43:08] Checking for apptainer binary...
[2026-02-09 05:43:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 05:43:08] Running /usr/bin/apptainer --version
[2026-02-09 05:43:08] apptainer version 1.4.5-2.el9
[2026-02-09 05:43:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 05:43:09] mff2101.farm.particle.cz
[2026-02-09 05:43:09] apptainer works
[2026-02-09 05:43:09] Set ATHENA_PROC_NUMBER=12
[2026-02-09 05:43:09] Set ATHENA_CORE_NUMBER=12
[2026-02-09 05:43:09] Starting ATLAS job with PandaID=7005399253
[2026-02-09 05:43:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 07:39:43]  *** The last 200 lines of the pilot log: ***
[2026-02-09 07:39:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-09 07:39:43]  is_altstaged=None
[2026-02-09 07:39:43]  is_tar=False
[2026-02-09 07:39:43]  lfn=log.48310749._008381.job.log.tgz.1
[2026-02-09 07:39:43]  mtime=0
[2026-02-09 07:39:43]  protocol_id=None
[2026-02-09 07:39:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-09 07:39:43]  replicas=None
[2026-02-09 07:39:43]  scope=mc23_13p6TeV
[2026-02-09 07:39:43]  status=None
[2026-02-09 07:39:43]  status_code=0
[2026-02-09 07:39:43]  storage_token=
[2026-02-09 07:39:43]  surl=/scratch/.boinc/slots/3/PanDA_Pilot-7005399253/log.48310749._008381.job.log.tgz.1
[2026-02-09 07:39:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/95/log.48310749._008381.job.log.tgz.1
[2026-02-09 07:39:43]  workdir=None
[2026-02-09 07:39:43] ]
[2026-02-09 07:39:43] 2026-02-09 06:13:45,579 | INFO     | transferring file log.48310749._008381.job.log.tgz.1 from /scratch/.boinc/slots/3/PanDA_Pilot-7005399253/log.48310749._008381.job.log.tgz.1 to /scratch/.boinc/slot
[2026-02-09 07:39:43] 2026-02-09 06:13:45,579 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/3/PanDA_Pilot-7005399253/log.48310749._008381.job.log.tgz.1 /scratch/.boinc/slots/3/log.48310749._008381.j
[2026-02-09 07:39:43] 2026-02-09 06:13:45,811 | INFO     | adding to output.list: log.48310749._008381.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/95/log.48310749._008381.job.log.tg
[2026-02-09 07:39:43] 2026-02-09 06:13:45,812 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-09 07:39:43] 2026-02-09 06:13:45,812 | INFO     | summary of transferred files:
[2026-02-09 07:39:43] 2026-02-09 06:13:45,812 | INFO     |  -- lfn=log.48310749._008381.job.log.tgz.1, status_code=0, status=transferred
[2026-02-09 07:39:43] 2026-02-09 06:13:45,812 | INFO     | stage-out finished correctly
[2026-02-09 07:39:43] 2026-02-09 06:13:46,403 | INFO     | time since job start (5332s) is within the limit (349056.0s)
[2026-02-09 07:39:43] 2026-02-09 06:13:46,613 | WARNING  | process 4062060 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 07:39:43] 2026-02-09 06:13:46,613 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-7005399253/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 07:39:43] 2026-02-09 06:13:47,007 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-09 07:39:43] 2026-02-09 06:13:47,196 | INFO     | number of running child processes to parent process 4062060: 1
[2026-02-09 07:39:43] 2026-02-09 06:13:47,197 | INFO     | maximum number of monitored processes: 6
[2026-02-09 07:39:43] 2026-02-09 06:13:48,093 | INFO     | job 7005399253 has state=finished
[2026-02-09 07:39:43] 2026-02-09 06:13:48,093 | INFO     | preparing for final server update for job 7005399253 in state='finished'
[2026-02-09 07:39:43] 2026-02-09 06:13:48,093 | INFO     | reading metadata from: /scratch/.boinc/slots/3/PanDA_Pilot-7005399253/jobReport.json
[2026-02-09 07:39:43] 2026-02-09 06:13:48,095 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/3/workernode_map.json
[2026-02-09 07:39:43] 2026-02-09 06:13:48,096 | INFO     | this job has now completed (state=finished)
[2026-02-09 07:39:43] 2026-02-09 06:13:48,096 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 07:39:43] 2026-02-09 06:13:48,096 | INFO     | log transfer has been attempted: DONE
[2026-02-09 07:39:43] 2026-02-09 06:13:48,096 | INFO     | job 7005399253 has finished - writing final server update
[2026-02-09 07:39:43] 2026-02-09 06:13:48,096 | INFO     | total number of processed events: 400 (read)
[2026-02-09 07:39:43] 2026-02-09 06:13:48,124 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-7005399253/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 07:39:43] 2026-02-09 06:13:48,125 | INFO     | extracted standard info from prmon json
[2026-02-09 07:39:43] 2026-02-09 06:13:48,125 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 07:39:43] 2026-02-09 06:13:48,125 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 07:39:43] 2026-02-09 06:13:48,125 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 07:39:43] 2026-02-09 06:13:48,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 07:39:43] 2026-02-09 06:13:48,127 | INFO     | fitting pss+swap vs Time
[2026-02-09 07:39:43] 2026-02-09 06:13:48,127 | INFO     | sum of square deviations: 152858680.0
[2026-02-09 07:39:43] 2026-02-09 06:13:48,127 | INFO     | sum of deviations: 811473118.0
[2026-02-09 07:39:43] 2026-02-09 06:13:48,127 | INFO     | mean x: 1770615059.0
[2026-02-09 07:39:43] 2026-02-09 06:13:48,127 | INFO     | mean y: 2682181.1772151897
[2026-02-09 07:39:43] 2026-02-09 06:13:48,128 | INFO     | intersect: -9396892136.12347
[2026-02-09 07:39:43] 2026-02-09 06:13:48,128 | INFO     | chi2: 0.013915495078284611
[2026-02-09 07:39:43] 2026-02-09 06:13:48,128 | INFO     | current memory leak: 5.31 B/s (using 79 data points, chi2=0.01)
[2026-02-09 07:39:43] 2026-02-09 06:13:48,128 | INFO     | could have reported an average CPU frequency of 2775 MHz (6 samples)
[2026-02-09 07:39:43] 2026-02-09 06:13:48,128 | INFO     | ..............................
[2026-02-09 07:39:43] 2026-02-09 06:13:48,128 | INFO     | . Timing measurements:
[2026-02-09 07:39:43] 2026-02-09 06:13:48,128 | INFO     | . get job = 0 s
[2026-02-09 07:39:43] 2026-02-09 06:13:48,128 | INFO     | . initial setup = 40 s
[2026-02-09 07:39:43] 2026-02-09 06:13:48,132 | INFO     | . payload setup = 44 s
[2026-02-09 07:39:43] 2026-02-09 06:13:48,133 | INFO     | . stage-in = 0 s
[2026-02-09 07:39:43] 2026-02-09 06:13:48,133 | INFO     | . payload execution = 5278 s
[2026-02-09 07:39:43] 2026-02-09 06:13:48,133 | INFO     | . stage-out = 1 s
[2026-02-09 07:39:43] 2026-02-09 06:13:48,133 | INFO     | . log creation = 0 s
[2026-02-09 07:39:43] 2026-02-09 06:13:48,133 | INFO     | ..............................
[2026-02-09 07:39:43] 2026-02-09 06:13:48,237 | INFO     | 
[2026-02-09 07:39:43] 2026-02-09 06:13:48,237 | INFO     | job summary report
[2026-02-09 07:39:43] 2026-02-09 06:13:48,237 | INFO     | --------------------------------------------------
[2026-02-09 07:39:43] 2026-02-09 06:13:48,237 | INFO     | PanDA job id: 7005399253
[2026-02-09 07:39:43] 2026-02-09 06:13:48,237 | INFO     | task id: 48310749
[2026-02-09 07:39:43] 2026-02-09 06:13:48,237 | INFO     | errors: (none)
[2026-02-09 07:39:43] 2026-02-09 06:13:48,237 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 07:39:43] 2026-02-09 06:13:48,237 | INFO     | pilot state: finished 
[2026-02-09 07:39:43] 2026-02-09 06:13:48,237 | INFO     | transexitcode: 0
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | exeerrorcode: 0
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | exeerrordiag: 
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | exitcode: 0
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | exitmsg: OK
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | cpuconsumptiontime: 34452 s
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | nevents: 400
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | neventsw: 0
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | pid: 4062060
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | pgrp: 4062060
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | corecount: 12
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | event service: False
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | sizes: {0: 2282549, 1: 2283066, 2: 2283066, 5326: 2309686, 5329: 2318686, 5330: 2318742, 5331: 2319064}
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | --------------------------------------------------
[2026-02-09 07:39:43] 2026-02-09 06:13:48,238 | INFO     | 
[2026-02-09 07:39:43] 2026-02-09 06:13:48,239 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2026-02-09 07:39:43] 2026-02-09 06:13:48,390 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,392 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,392 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,392 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 07:39:43] 2026-02-09 06:13:48,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,392 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 07:39:43] 2026-02-09 06:13:48,392 | INFO     | job 7005399253 has completed (purged errors)
[2026-02-09 07:39:43] 2026-02-09 06:13:48,392 | INFO     | overall cleanup function is called
[2026-02-09 07:39:43] 2026-02-09 06:13:49,407 | INFO     | --- collectZombieJob: --- 10, [4062060]
[2026-02-09 07:39:43] 2026-02-09 06:13:49,407 | INFO     | zombie collector waiting for pid 4062060
[2026-02-09 07:39:43] 2026-02-09 06:13:49,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 07:39:43] 2026-02-09 06:13:49,407 | INFO     | collected zombie processes
[2026-02-09 07:39:43] 2026-02-09 06:13:49,407 | INFO     | will attempt to kill all subprocesses of pid=4062060
[2026-02-09 07:39:43] 2026-02-09 06:13:49,855 | INFO     | process IDs to be killed: [4062060] (in reverse order)
[2026-02-09 07:39:43] 2026-02-09 06:13:50,033 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 07:39:43] 2026-02-09 06:13:50,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 07:39:43] 2026-02-09 06:13:50,056 | INFO     | did not find any defunct processes belonging to 4062060
[2026-02-09 07:39:43] 2026-02-09 06:13:50,076 | INFO     | did not find any defunct processes belonging to 4062060
[2026-02-09 07:39:43] 2026-02-09 06:13:50,077 | INFO     | ready for new job
[2026-02-09 07:39:43] 2026-02-09 06:13:50,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 07:39:43] 2026-02-09 06:13:50,084 | INFO     | **************************************
[2026-02-09 07:39:43] 2026-02-09 06:13:50,084 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 07:39:43] 2026-02-09 06:13:50,084 | INFO     | **************************************
[2026-02-09 07:39:43] 2026-02-09 06:13:50,084 | INFO     | 
[2026-02-09 07:39:43] 2026-02-09 06:13:50,102 | INFO     | architecture information:
[2026-02-09 07:39:43] 2026-02-09 06:13:50,107 | INFO     | executing command: cat /etc/os-release
[2026-02-09 07:39:43] 2026-02-09 06:13:50,166 | INFO     | cat /etc/os-release:
[2026-02-09 07:39:43] NAME="CentOS Linux"
[2026-02-09 07:39:43] VERSION="7 (Core)"
[2026-02-09 07:39:43] ID="centos"
[2026-02-09 07:39:43] ID_LIKE="rhel fedora"
[2026-02-09 07:39:43] VERSION_ID="7"
[2026-02-09 07:39:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 07:39:43] ANSI_COLOR="0;31"
[2026-02-09 07:39:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 07:39:43] HOME_URL="https://www.centos.org/"
[2026-02-09 07:39:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 07:39:43] 
[2026-02-09 07:39:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 07:39:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 07:39:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 07:39:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 07:39:43] 
[2026-02-09 07:39:43] 2026-02-09 06:13:50,167 | INFO     | **************************************
[2026-02-09 07:39:43] 2026-02-09 06:13:50,669 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2026-02-09 07:39:43] 2026-02-09 06:13:50,765 | INFO     | sufficient remaining disk space (1287825391616 B)
[2026-02-09 07:39:43] 2026-02-09 06:13:50,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 07:39:43] 2026-02-09 06:13:50,765 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 07:39:43] 2026-02-09 06:13:50,766 | INFO     | update_server=False
[2026-02-09 07:39:43] 2026-02-09 06:13:50,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 07:39:43] 2026-02-09 06:13:50,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 07:39:43] 2026-02-09 06:13:50,767 | INFO     | aborting loop
[2026-02-09 07:39:43] 2026-02-09 06:13:51,405 | INFO     | all payload control threads have been joined
[2026-02-09 07:39:43] 2026-02-09 06:13:51,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 07:39:43] 2026-02-09 06:13:51,772 | INFO     | [job] retrieve thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:51,773 | INFO     | [job] job monitor thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:51,862 | INFO     | all data control threads have been joined
[2026-02-09 07:39:43] 2026-02-09 06:13:51,888 | INFO     | [payload] failed_post thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:51,914 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:51,937 | INFO     | [job] validate thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:52,140 | INFO     | [payload] validate_post thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:52,255 | INFO     | all job control threads have been joined
[2026-02-09 07:39:43] 2026-02-09 06:13:52,411 | INFO     | [payload] control thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:52,608 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:52,615 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:52,868 | INFO     | [data] control thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:52,991 | INFO     | [data] copytool_in thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:53,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 07:39:43] 2026-02-09 06:13:53,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 07:39:43] 2026-02-09 06:13:53,261 | INFO     | [job] control thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:53,437 | INFO     | [data] copytool_out thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:54,259 | INFO     | [job] queue monitor thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:13:57,217 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:14:00,979 | INFO     | job.realtimelogging is not enabled
[2026-02-09 07:39:43] 2026-02-09 06:14:01,985 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 07:39:43] 2026-02-09 06:14:03,284 | INFO     | [monitor] cgroup control has ended
[2026-02-09 07:39:43] 2026-02-09 06:14:03,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140560208631616)>', '<ExcThread(monitor, started 140559842797312)>']
[2026-02-09 07:39:43] 2026-02-09 06:14:08,352 | INFO     | all workflow threads have been joined
[2026-02-09 07:39:43] 2026-02-09 06:14:08,352 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 07:39:43] 2026-02-09 06:14:08,352 | INFO     | traces error code: 0
[2026-02-09 07:39:43] 2026-02-09 06:14:08,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 07:39:43] 2026-02-09 06:14:12,112 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-02-09 07:39:43] 2026-02-09 06:14:19,994 | INFO     | PID=4041559 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 07:39:43] 2026-02-09 06:14:19,995 | INFO     | .. there are 20 such processes running
[2026-02-09 07:39:43] 2026-02-09 06:14:19,995 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 07:39:43] 2026-02-09 06:14:19,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 07:39:43] 2026-02-09 06:14:19,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 07:39:43] 2026-02-09 06:14:19,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 07:39:43] 2026-02-09 06:14:19,995 | INFO     | [monitor] control thread has ended
[2026-02-09 07:39:43] 2026-02-09 06:14:20,317 [wrapper] ==== pilot stdout END ====
[2026-02-09 07:39:43] 2026-02-09 06:14:20,359 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 07:39:43] 2026-02-09 06:14:20,402 [wrapper] pilotpid: 4041559
[2026-02-09 07:39:43] 2026-02-09 06:14:20,440 [wrapper] Pilot exit status: 0
[2026-02-09 07:39:43] 2026-02-09 06:14:20,630 [wrapper] pandaids: 7005399253
[2026-02-09 07:39:43] 2026-02-09 06:14:20,871 [wrapper] cleanup supervisor_pilot 4146347 4041560
[2026-02-09 07:39:43] 2026-02-09 06:14:20,914 [wrapper] Test setup, not cleaning
[2026-02-09 07:39:43] 2026-02-09 06:14:20,932 [wrapper] apfmon messages muted
[2026-02-09 07:39:43] 2026-02-09 06:14:20,972 [wrapper] ==== wrapper stdout END ====
[2026-02-09 07:39:43] 2026-02-09 06:14:21,005 [wrapper] ==== wrapper stderr END ====
[2026-02-09 07:39:43]  *** Error codes and diagnostics ***
[2026-02-09 07:39:43]     "exeErrorCode": 0,
[2026-02-09 07:39:43]     "exeErrorDiag": "",
[2026-02-09 07:39:43]     "pilotErrorCode": 0,
[2026-02-09 07:39:43]     "pilotErrorDiag": "",
[2026-02-09 07:39:43]  *** Listing of results directory ***
[2026-02-09 07:39:43] total 662184
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc    584627 Feb  8 12:49 pilot3.tar.gz
[2026-02-09 07:39:43] -rwx------ 1 boinc boinc     36322 Feb  8 12:52 runpilot2-wrapper.sh
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc      5111 Feb  8 12:56 queuedata.json
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc       100 Feb  9 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 07:39:43] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 05:43 run_atlas
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc       105 Feb  9 05:43 job.xml
[2026-02-09 07:39:43] -rw-r--r-- 2 boinc boinc 492863870 Feb  9 05:43 EVNT.48310747._000158.pool.root.1
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc      6676 Feb  9 05:43 init_data.xml
[2026-02-09 07:39:43] -rw-r--r-- 2 boinc boinc     15845 Feb  9 05:43 start_atlas.sh
[2026-02-09 07:39:43] drwxrwx--x 2 boinc boinc      4096 Feb  9 05:43 shared
[2026-02-09 07:39:43] -rw-r--r-- 2 boinc boinc    597952 Feb  9 05:43 input.tar.gz
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc         0 Feb  9 05:43 boinc_lockfile
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc      2522 Feb  9 05:43 pandaJob.out
[2026-02-09 07:39:43] -rw------- 1 boinc boinc   1009504 Feb  9 05:44 agis_schedconf.cvmfs.json
[2026-02-09 07:39:43] -rw------- 1 boinc boinc   1513088 Feb  9 05:44 agis_ddmendpoints.agis.ALL.json
[2026-02-09 07:39:43] -rw------- 1 boinc boinc       436 Feb  9 05:44 workernode_map.json
[2026-02-09 07:39:43] drwx------ 5 boinc boinc      4096 Feb  9 05:44 pilot3
[2026-02-09 07:39:43] -rw------- 1 boinc boinc 178975537 Feb  9 07:13 HITS.48310749._008381.pool.root.1
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc       527 Feb  9 07:13 boinc_task_state.xml
[2026-02-09 07:39:43] -rw------- 1 boinc boinc      1019 Feb  9 07:13 memory_monitor_summary.json
[2026-02-09 07:39:43] -rw------- 1 boinc boinc    386649 Feb  9 07:13 log.48310749._008381.job.log.tgz.1
[2026-02-09 07:39:43] -rw------- 1 boinc boinc        95 Feb  9 07:13 pilot_heartbeat.json
[2026-02-09 07:39:43] -rw------- 1 boinc boinc      6327 Feb  9 07:13 heartbeat.json
[2026-02-09 07:39:43] -rw------- 1 boinc boinc       823 Feb  9 07:14 pilotlog.txt
[2026-02-09 07:39:43] -rw------- 1 boinc boinc    761520 Feb  9 07:14 log.48310749._008381.job.log.1
[2026-02-09 07:39:43] -rw------- 1 boinc boinc       357 Feb  9 07:14 output.list
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc       620 Feb  9 07:14 runtime_log
[2026-02-09 07:39:43] -rw------- 1 boinc boinc   1167360 Feb  9 07:14 result.tar.gz
[2026-02-09 07:39:43] -rw------- 1 boinc boinc       663 Feb  9 07:14 wCLODmcWI98n9Rq4apOajLDm4fhM0noT9bVooX4SDmyCdKDme4xNwm.diag
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc      8879 Feb  9 07:14 runtime_log.err
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc        25 Feb  9 07:39 wrapper_checkpoint.txt
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc      8192 Feb  9 07:39 boinc_mmap_file
[2026-02-09 07:39:43] -rw-r--r-- 1 boinc boinc     21445 Feb  9 07:39 stderr.txt
[2026-02-09 07:39:43] HITS file was successfully produced:
[2026-02-09 07:39:43] -rw------- 1 boinc boinc 178975537 Feb  9 07:13 shared/HITS.pool.root.1
[2026-02-09 07:39:43]  *** Contents of shared directory: ***
[2026-02-09 07:39:43] total 657848
[2026-02-09 07:39:43] -rw-r--r-- 2 boinc boinc 492863870 Feb  9 05:43 ATLAS.root_0
[2026-02-09 07:39:43] -rw-r--r-- 2 boinc boinc     15845 Feb  9 05:43 start_atlas.sh
[2026-02-09 07:39:43] -rw-r--r-- 2 boinc boinc    597952 Feb  9 05:43 input.tar.gz
[2026-02-09 07:39:43] -rw------- 1 boinc boinc 178975537 Feb  9 07:13 HITS.pool.root.1
[2026-02-09 07:39:43] -rw------- 1 boinc boinc   1167360 Feb  9 07:14 result.tar.gz
07:39:45 (4025471): run_atlas exited; CPU time 34611.546721
07:39:45 (4025471): called boinc_finish(0)

</stderr_txt>
]]>

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