Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:16:03 (249104): wrapper (7.7.26015): starting
07:16:03 (249104): wrapper: running run_atlas (--nthreads 4)
[2026-02-09 07:16:03] Arguments: --nthreads 4
[2026-02-09 07:16:03] Threads: 4
[2026-02-09 07:16:03] Checking for CVMFS
[2026-02-09 07:16:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 07:16:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 07:16:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 07:16:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 07:16:04] 2.9.2.0 3731233 4252 96436 156046 1 49 24842074 36864001 0 130560 0 1998670 99.985 155328 13241 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 07:16:04] CVMFS is ok
[2026-02-09 07:16:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 07:16:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 07:16:04] Further information can be found at the LHC@home message board.
[2026-02-09 07:16:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 07:16:04] Checking for apptainer binary...
[2026-02-09 07:16:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 07:16:04] Running /usr/bin/apptainer --version
[2026-02-09 07:16:04] apptainer version 1.4.1-1.1
[2026-02-09 07:16:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 07:16:04] thA332a
[2026-02-09 07:16:04] apptainer works
[2026-02-09 07:16:04] Set ATHENA_PROC_NUMBER=4
[2026-02-09 07:16:04] Set ATHENA_CORE_NUMBER=4
[2026-02-09 07:16:04] Starting ATLAS job with PandaID=7005045260
[2026-02-09 07:16:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 08:33:28]  *** The last 200 lines of the pilot log: ***
[2026-02-09 08:33:28] VERSION_ID="7"
[2026-02-09 08:33:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 08:33:28] ANSI_COLOR="0;31"
[2026-02-09 08:33:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 08:33:28] HOME_URL="https://www.centos.org/"
[2026-02-09 08:33:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 08:33:28] 
[2026-02-09 08:33:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 08:33:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 08:33:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 08:33:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 08:33:28] 
[2026-02-09 08:33:28] 2026-02-09 07:32:26,816 | INFO     | **************************************
[2026-02-09 08:33:28] 2026-02-09 07:32:27,319 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-09 08:33:28] 2026-02-09 07:32:27,338 | INFO     | sufficient remaining disk space (330958897152 B)
[2026-02-09 08:33:28] 2026-02-09 07:32:27,338 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 08:33:28] 2026-02-09 07:32:27,338 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 08:33:28] 2026-02-09 07:32:27,338 | INFO     | update_server=False
[2026-02-09 08:33:28] 2026-02-09 07:32:27,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 08:33:28] 2026-02-09 07:32:27,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 08:33:28] 2026-02-09 07:32:27,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 08:33:28] 2026-02-09 07:32:27,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 08:33:28] 2026-02-09 07:32:27,928 | INFO     | all payload control threads have been joined
[2026-02-09 08:33:28] 2026-02-09 07:32:28,101 | INFO     | all data control threads have been joined
[2026-02-09 08:33:28] 2026-02-09 07:32:28,344 | INFO     | [job] retrieve thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:28,344 | INFO     | [job] queue monitor thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:28,352 | INFO     | [data] copytool_in thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:28,408 | INFO     | [payload] failed_post thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:28,645 | WARNING  | process 257720 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 08:33:28] 2026-02-09 07:32:28,677 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 08:33:28] 2026-02-09 07:32:28,678 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 08:33:28] 2026-02-09 07:32:28,678 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-09 08:33:28] 2026-02-09 07:32:28,678 | WARNING  | maxPSS not found in memory monitor output
[2026-02-09 08:33:28] 2026-02-09 07:32:28,678 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7005045260/payload.stdout) since it has not been created yet
[2026-02-09 08:33:28] 2026-02-09 07:32:28,678 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-09 08:33:28] 2026-02-09 07:32:28,692 | INFO     | sufficient remaining disk space (330958897152 B)
[2026-02-09 08:33:28] 2026-02-09 07:32:28,693 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-09 08:33:28] 2026-02-09 07:32:28,693 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7005045260/HITS.48318010._012813.pool.root.1 since it does not exist
[2026-02-09 08:33:28] 2026-02-09 07:32:28,733 | INFO     | number of running child processes to parent process 257720: 1
[2026-02-09 08:33:28] 2026-02-09 07:32:28,733 | INFO     | maximum number of monitored processes: 6
[2026-02-09 08:33:28] 2026-02-09 07:32:28,733 | INFO     | aborting job monitoring since job object (job id=7005045260) has expired
[2026-02-09 08:33:28] 2026-02-09 07:32:28,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 08:33:28] 2026-02-09 07:32:28,733 | INFO     | will abort loop
[2026-02-09 08:33:28] 2026-02-09 07:32:28,934 | INFO     | [payload] control thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:28,969 | INFO     | all job control threads have been joined
[2026-02-09 08:33:28] 2026-02-09 07:32:29,107 | INFO     | [data] control thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:29,344 | INFO     | [data] copytool_out thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:29,383 | INFO     | [job] validate thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:29,400 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:29,663 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:29,709 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:29,735 | INFO     | [payload] validate_post thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:29,739 | INFO     | [job] job monitor thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:29,975 | INFO     | [job] control thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:31,345 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:37,485 | INFO     | job.realtimelogging is not enabled
[2026-02-09 08:33:28] 2026-02-09 07:32:38,491 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 08:33:28] 2026-02-09 07:32:57,276 | INFO     | PID=253208 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 08:33:28] 2026-02-09 07:32:57,277 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 08:33:28] 2026-02-09 07:32:57,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 08:33:28] 2026-02-09 07:32:57,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 08:33:28] 2026-02-09 07:33:21,832 | INFO     | [monitor] cgroup control has ended
[2026-02-09 08:33:28] 2026-02-09 07:33:23,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727145686848)>', '<ExcThread(monitor, started 139726250026752)>']
[2026-02-09 08:33:28] 2026-02-09 07:33:23,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 08:33:28] 2026-02-09 07:33:23,410 | INFO     | [monitor] control thread has ended
[2026-02-09 08:33:28] 2026-02-09 07:33:28,151 | INFO     | all workflow threads have been joined
[2026-02-09 08:33:28] 2026-02-09 07:33:28,151 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 08:33:28] 2026-02-09 07:33:28,151 | INFO     | traces error code: 0
[2026-02-09 08:33:28] 2026-02-09 07:33:28,151 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 08:33:28] 2026-02-09 07:33:28,233 [wrapper] ==== pilot stdout END ====
[2026-02-09 08:33:28] 2026-02-09 07:33:28,237 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 08:33:28] 2026-02-09 07:33:28,241 [wrapper] pilotpid: 253208
[2026-02-09 08:33:28] 2026-02-09 07:33:28,245 [wrapper] Pilot exit status: 0
[2026-02-09 08:33:28] 2026-02-09 07:33:28,257 [wrapper] pandaids: 7005045260
[2026-02-09 08:33:28] 2026-02-09 07:33:28,281 [wrapper] cleanup supervisor_pilot  263041 253209
[2026-02-09 08:33:28] 2026-02-09 07:33:28,285 [wrapper] Test setup, not cleaning
[2026-02-09 08:33:28] 2026-02-09 07:33:28,288 [wrapper] apfmon messages muted
[2026-02-09 08:33:28] 2026-02-09 07:33:28,292 [wrapper] ==== wrapper stdout END ====
[2026-02-09 08:33:28] 2026-02-09 07:33:28,296 [wrapper] ==== wrapper stderr END ====
[2026-02-09 08:33:28]  *** Error codes and diagnostics ***
[2026-02-09 08:33:28]     "exeErrorCode": 0,
[2026-02-09 08:33:28]     "exeErrorDiag": "",
[2026-02-09 08:33:28]     "pilotErrorCode": 0,
[2026-02-09 08:33:28]     "pilotErrorDiag": "",
[2026-02-09 08:33:28]  *** Listing of results directory ***
[2026-02-09 08:33:28] total 671040
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc    584627 Feb  8 12:49 pilot3.tar.gz
[2026-02-09 08:33:28] -rwx------ 1 boinc boinc     36322 Feb  8 12:52 runpilot2-wrapper.sh
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc      5111 Feb  8 12:56 queuedata.json
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc       100 Feb  9 07:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 08:33:28] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 07:16 run_atlas
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc       105 Feb  9 07:16 job.xml
[2026-02-09 08:33:28] -rw-r--r-- 2 boinc boinc 495322018 Feb  9 07:16 EVNT.48318008._000165.pool.root.1
[2026-02-09 08:33:28] -rw-r--r-- 2 boinc boinc    597961 Feb  9 07:16 input.tar.gz
[2026-02-09 08:33:28] -rw-r--r-- 2 boinc boinc     15845 Feb  9 07:16 start_atlas.sh
[2026-02-09 08:33:28] drwxrwx--x 2 boinc boinc      4096 Feb  9 07:16 shared
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc         0 Feb  9 07:16 boinc_setup_complete
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc      6370 Feb  9 07:16 init_data.xml
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc         0 Feb  9 07:16 boinc_lockfile
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc      2526 Feb  9 07:16 pandaJob.out
[2026-02-09 08:33:28] -rw------- 1 boinc boinc   1009504 Feb  9 07:16 agis_schedconf.cvmfs.json
[2026-02-09 08:33:28] -rw------- 1 boinc boinc   1513088 Feb  9 07:16 agis_ddmendpoints.agis.ALL.json
[2026-02-09 08:33:28] -rw------- 1 boinc boinc       428 Feb  9 07:16 workernode_map.json
[2026-02-09 08:33:28] drwx------ 5 boinc boinc      4096 Feb  9 07:16 pilot3
[2026-02-09 08:33:28] -rw------- 1 boinc boinc 186016892 Feb  9 08:32 HITS.48318010._012813.pool.root.1
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc       531 Feb  9 08:32 boinc_task_state.xml
[2026-02-09 08:33:28] -rw------- 1 boinc boinc      1023 Feb  9 08:32 memory_monitor_summary.json
[2026-02-09 08:33:28] -rw------- 1 boinc boinc    265248 Feb  9 08:32 log.48318010._012813.job.log.tgz.1
[2026-02-09 08:33:28] -rw------- 1 boinc boinc      6314 Feb  9 08:32 heartbeat.json
[2026-02-09 08:33:28] -rw------- 1 boinc boinc        95 Feb  9 08:32 pilot_heartbeat.json
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc        27 Feb  9 08:33 wrapper_checkpoint.txt
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc      8192 Feb  9 08:33 boinc_mmap_file
[2026-02-09 08:33:28] -rw------- 1 boinc boinc      6318 Feb  9 08:33 pilotlog.txt
[2026-02-09 08:33:28] -rw------- 1 boinc boinc    672698 Feb  9 08:33 log.48318010._012813.job.log.1
[2026-02-09 08:33:28] -rw------- 1 boinc boinc       357 Feb  9 08:33 output.list
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc       620 Feb  9 08:33 runtime_log
[2026-02-09 08:33:28] -rw------- 1 boinc boinc    952320 Feb  9 08:33 result.tar.gz
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc      8901 Feb  9 08:33 runtime_log.err
[2026-02-09 08:33:28] -rw------- 1 boinc boinc       658 Feb  9 08:33 3fuLDmeWI98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTkdKDmyhQbPo.diag
[2026-02-09 08:33:28] -rw-r--r-- 1 boinc boinc     10422 Feb  9 08:33 stderr.txt
[2026-02-09 08:33:28] HITS file was successfully produced:
[2026-02-09 08:33:28] -rw------- 1 boinc boinc 186016892 Feb  9 08:32 shared/HITS.pool.root.1
[2026-02-09 08:33:28]  *** Contents of shared directory: ***
[2026-02-09 08:33:28] total 666916
[2026-02-09 08:33:28] -rw-r--r-- 2 boinc boinc 495322018 Feb  9 07:16 ATLAS.root_0
[2026-02-09 08:33:28] -rw-r--r-- 2 boinc boinc    597961 Feb  9 07:16 input.tar.gz
[2026-02-09 08:33:28] -rw-r--r-- 2 boinc boinc     15845 Feb  9 07:16 start_atlas.sh
[2026-02-09 08:33:28] -rw------- 1 boinc boinc 186016892 Feb  9 08:32 HITS.pool.root.1
[2026-02-09 08:33:28] -rw------- 1 boinc boinc    952320 Feb  9 08:33 result.tar.gz
08:33:29 (249104): run_atlas exited; CPU time 17240.720013
08:33:29 (249104): called boinc_finish(0)

</stderr_txt>
]]>

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