Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:22:18 (3531551): wrapper (7.7.26015): starting
13:22:18 (3531551): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 13:22:18] Arguments: --nthreads 8
[2026-02-08 13:22:18] Threads: 8
[2026-02-08 13:22:18] Checking for CVMFS
[2026-02-08 13:22:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 13:22:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 13:22:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 13:22:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 13:22:21] 2.13.3.0 3401664 5622 186140 156029 0 136 24648120 32935937 23106 16776704 0 7883113 99.095 17228777 13023 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-08 13:22:21] CVMFS is ok
[2026-02-08 13:22:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 13:22:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 13:22:21] Further information can be found at the LHC@home message board.
[2026-02-08 13:22:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 13:22:21] Checking for apptainer binary...
[2026-02-08 13:22:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 13:22:21] Running /usr/bin/apptainer --version
[2026-02-08 13:22:21] apptainer version 1.4.5-2.el9
[2026-02-08 13:22:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 13:22:22] c6-12-25-3.aglt2.org
[2026-02-08 13:22:22] apptainer works
[2026-02-08 13:22:22] Set ATHENA_PROC_NUMBER=8
[2026-02-08 13:22:22] Set ATHENA_CORE_NUMBER=8
[2026-02-08 13:22:22] Starting ATLAS job with PandaID=6994679139
[2026-02-08 13:22:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 21:59:30]  *** The last 200 lines of the pilot log: ***
[2026-02-08 21:59:30] 2026-02-09 02:58:25,679 | INFO     | job 6994679139 has finished - writing final server update
[2026-02-08 21:59:30] 2026-02-09 02:58:25,680 | INFO     | total number of processed events: 400 (read)
[2026-02-08 21:59:30] 2026-02-09 02:58:25,726 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6994679139/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 21:59:30] 2026-02-09 02:58:25,728 | INFO     | extracted standard info from prmon json
[2026-02-08 21:59:30] 2026-02-09 02:58:25,728 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 21:59:30] 2026-02-09 02:58:25,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 21:59:30] 2026-02-09 02:58:25,729 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 21:59:30] 2026-02-09 02:58:25,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 21:59:30] 2026-02-09 02:58:25,752 | INFO     | fitting pss+swap vs Time
[2026-02-08 21:59:30] 2026-02-09 02:58:25,754 | INFO     | sum of square deviations: 40173215564.83798
[2026-02-08 21:59:30] 2026-02-09 02:58:25,770 | INFO     | sum of deviations: 15305935406.727238
[2026-02-08 21:59:30] 2026-02-09 02:58:25,771 | INFO     | mean x: 1770590477.4426877
[2026-02-08 21:59:30] 2026-02-09 02:58:25,771 | INFO     | mean y: 2505641.8181818184
[2026-02-08 21:59:30] 2026-02-09 02:58:25,771 | INFO     | intersect: -672086697.8406864
[2026-02-08 21:59:30] 2026-02-09 02:58:25,773 | INFO     | chi2: 3.9474482796558794
[2026-02-08 21:59:30] 2026-02-09 02:58:25,775 | INFO     | sum of square deviations: 38994204052.85029
[2026-02-08 21:59:30] 2026-02-09 02:58:25,791 | INFO     | sum of deviations: 82203300958.26363
[2026-02-08 21:59:30] 2026-02-09 02:58:25,791 | INFO     | mean x: 1770590324.9520957
[2026-02-08 21:59:30] 2026-02-09 02:58:25,792 | INFO     | mean y: 2514242.844311377
[2026-02-08 21:59:30] 2026-02-09 02:58:25,792 | INFO     | intersect: -3730049939.221306
[2026-02-08 21:59:30] 2026-02-09 02:58:25,794 | INFO     | chi2: 2.4181680081801398
[2026-02-08 21:59:30] 2026-02-09 02:58:25,794 | INFO     | current chi2=2.4181680081801398 (change=38.74098311451608 %)
[2026-02-08 21:59:30] 2026-02-09 02:58:25,796 | INFO     | sum of square deviations: 37838434427.11084
[2026-02-08 21:59:30] 2026-02-09 02:58:25,811 | INFO     | sum of deviations: 80938306312.39107
[2026-02-08 21:59:30] 2026-02-09 02:58:25,811 | INFO     | mean x: 1770590172.4576614
[2026-02-08 21:59:30] 2026-02-09 02:58:25,812 | INFO     | mean y: 2514075.9233870967
[2026-02-08 21:59:30] 2026-02-09 02:58:25,812 | INFO     | intersect: -3784866979.922001
[2026-02-08 21:59:30] 2026-02-09 02:58:25,814 | INFO     | chi2: 2.4185609518042566
[2026-02-08 21:59:30] 2026-02-09 02:58:25,814 | INFO     | current chi2=2.4185609518042566 (change=-0.016249641165855696 %)
[2026-02-08 21:59:30] 2026-02-09 02:58:25,814 | INFO     | right removable region: 495
[2026-02-08 21:59:30] 2026-02-09 02:58:25,816 | INFO     | sum of square deviations: 38993913082.850235
[2026-02-08 21:59:30] 2026-02-09 02:58:25,831 | INFO     | sum of deviations: -96598225730.58089
[2026-02-08 21:59:30] 2026-02-09 02:58:25,832 | INFO     | mean x: 1770590629.9520957
[2026-02-08 21:59:30] 2026-02-09 02:58:25,832 | INFO     | mean y: 2520076.9341317364
[2026-02-08 21:59:30] 2026-02-09 02:58:25,832 | INFO     | intersect: 4388740895.172213
[2026-02-08 21:59:30] 2026-02-09 02:58:25,834 | INFO     | chi2: 1.8801244867674898
[2026-02-08 21:59:30] 2026-02-09 02:58:25,835 | INFO     | current chi2=1.8801244867674898 (change=52.371143240630616 %)
[2026-02-08 21:59:30] 2026-02-09 02:58:25,836 | INFO     | sum of square deviations: 37837913363.27212
[2026-02-08 21:59:30] 2026-02-09 02:58:25,851 | INFO     | sum of deviations: -121023435285.59067
[2026-02-08 21:59:30] 2026-02-09 02:58:25,852 | INFO     | mean x: 1770590782.4616935
[2026-02-08 21:59:30] 2026-02-09 02:58:25,852 | INFO     | mean y: 2523293.6794354836
[2026-02-08 21:59:30] 2026-02-09 02:58:25,852 | INFO     | intersect: 5665705005.663395
[2026-02-08 21:59:30] 2026-02-09 02:58:25,854 | INFO     | chi2: 1.7777390253720693
[2026-02-08 21:59:30] 2026-02-09 02:58:25,854 | INFO     | current chi2=1.7777390253720693 (change=5.445674587827558 %)
[2026-02-08 21:59:30] 2026-02-09 02:58:25,855 | INFO     | left removable region: 20
[2026-02-08 21:59:30] 2026-02-09 02:58:25,856 | INFO     | sum of square deviations: 33232631545.865173
[2026-02-08 21:59:30] 2026-02-09 02:58:25,871 | INFO     | sum of deviations: -35844966516.38102
[2026-02-08 21:59:30] 2026-02-09 02:58:25,872 | INFO     | mean x: 1770590751.9831579
[2026-02-08 21:59:30] 2026-02-09 02:58:25,872 | INFO     | mean y: 2529652.827368421
[2026-02-08 21:59:30] 2026-02-09 02:58:25,873 | INFO     | intersect: 1912302164.5665648
[2026-02-08 21:59:30] 2026-02-09 02:58:25,874 | INFO     | chi2: 0.16801395664046903
[2026-02-08 21:59:30] 2026-02-09 02:58:25,875 | INFO     | current memory leak: -1.08 B/s (using 475 data points, chi2=0.17)
[2026-02-08 21:59:30] 2026-02-09 02:58:25,877 | INFO     | could have reported an average CPU frequency of 1000 MHz (21 samples)
[2026-02-08 21:59:30] 2026-02-09 02:58:25,877 | INFO     | ..............................
[2026-02-08 21:59:30] 2026-02-09 02:58:25,877 | INFO     | . Timing measurements:
[2026-02-08 21:59:30] 2026-02-09 02:58:25,878 | INFO     | . get job = 1 s
[2026-02-08 21:59:30] 2026-02-09 02:58:25,878 | INFO     | . initial setup = 24 s
[2026-02-08 21:59:30] 2026-02-09 02:58:25,878 | INFO     | . payload setup = 31 s
[2026-02-08 21:59:30] 2026-02-09 02:58:25,878 | INFO     | . stage-in = 0 s
[2026-02-08 21:59:30] 2026-02-09 02:58:25,878 | INFO     | . payload execution = 30839 s
[2026-02-08 21:59:30] 2026-02-09 02:58:25,879 | INFO     | . stage-out = 4 s
[2026-02-08 21:59:30] 2026-02-09 02:58:25,879 | INFO     | . log creation = 0 s
[2026-02-08 21:59:30] 2026-02-09 02:58:25,879 | INFO     | ..............................
[2026-02-08 21:59:30] 2026-02-09 02:58:26,135 | INFO     | 
[2026-02-08 21:59:30] 2026-02-09 02:58:26,136 | INFO     | job summary report
[2026-02-08 21:59:30] 2026-02-09 02:58:26,136 | INFO     | --------------------------------------------------
[2026-02-08 21:59:30] 2026-02-09 02:58:26,136 | INFO     | PanDA job id: 6994679139
[2026-02-08 21:59:30] 2026-02-09 02:58:26,136 | INFO     | task id: 48310589
[2026-02-08 21:59:30] 2026-02-09 02:58:26,136 | INFO     | errors: (none)
[2026-02-08 21:59:30] 2026-02-09 02:58:26,137 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 21:59:30] 2026-02-09 02:58:26,137 | INFO     | pilot state: finished 
[2026-02-08 21:59:30] 2026-02-09 02:58:26,137 | INFO     | transexitcode: 0
[2026-02-08 21:59:30] 2026-02-09 02:58:26,137 | INFO     | exeerrorcode: 0
[2026-02-08 21:59:30] 2026-02-09 02:58:26,138 | INFO     | exeerrordiag: 
[2026-02-08 21:59:30] 2026-02-09 02:58:26,138 | INFO     | exitcode: 0
[2026-02-08 21:59:30] 2026-02-09 02:58:26,138 | INFO     | exitmsg: OK
[2026-02-08 21:59:30] 2026-02-09 02:58:26,138 | INFO     | cpuconsumptiontime: 102259 s
[2026-02-08 21:59:30] 2026-02-09 02:58:26,138 | INFO     | nevents: 400
[2026-02-08 21:59:30] 2026-02-09 02:58:26,139 | INFO     | neventsw: 0
[2026-02-08 21:59:30] 2026-02-09 02:58:26,139 | INFO     | pid: 3543550
[2026-02-08 21:59:30] 2026-02-09 02:58:26,139 | INFO     | pgrp: 3543550
[2026-02-08 21:59:30] 2026-02-09 02:58:26,139 | INFO     | corecount: 8
[2026-02-08 21:59:30] 2026-02-09 02:58:26,139 | INFO     | event service: False
[2026-02-08 21:59:30] 2026-02-09 02:58:26,140 | INFO     | sizes: {0: 2282005, 1: 2282690, 2: 2283091, 3: 2283179, 14: 2283179, 30875: 2320798, 30876: 2320925, 30881: 2329979, 30883: 2330035, 30885: 2330229}
[2026-02-08 21:59:30] 2026-02-09 02:58:26,140 | INFO     | --------------------------------------------------
[2026-02-08 21:59:30] 2026-02-09 02:58:26,140 | INFO     | 
[2026-02-08 21:59:30] 2026-02-09 02:58:26,140 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-08 21:59:30] 2026-02-09 02:58:26,187 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,188 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,188 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,188 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,191 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,191 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,191 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,191 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,192 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 21:59:30] 2026-02-09 02:58:26,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,192 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 21:59:30] 2026-02-09 02:58:26,193 | INFO     | job 6994679139 has completed (purged errors)
[2026-02-08 21:59:30] 2026-02-09 02:58:26,193 | INFO     | overall cleanup function is called
[2026-02-08 21:59:30] 2026-02-09 02:58:27,207 | INFO     | --- collectZombieJob: --- 10, [3543550]
[2026-02-08 21:59:30] 2026-02-09 02:58:27,208 | INFO     | zombie collector waiting for pid 3543550
[2026-02-08 21:59:30] 2026-02-09 02:58:27,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 21:59:30] 2026-02-09 02:58:27,208 | INFO     | collected zombie processes
[2026-02-08 21:59:30] 2026-02-09 02:58:27,208 | INFO     | will attempt to kill all subprocesses of pid=3543550
[2026-02-08 21:59:30] 2026-02-09 02:58:28,246 | INFO     | process IDs to be killed: [3543550] (in reverse order)
[2026-02-08 21:59:30] 2026-02-09 02:58:28,530 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 21:59:30] 2026-02-09 02:58:28,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 21:59:30] 2026-02-09 02:58:28,567 | INFO     | did not find any defunct processes belonging to 3543550
[2026-02-08 21:59:30] 2026-02-09 02:58:28,653 | INFO     | did not find any defunct processes belonging to 3543550
[2026-02-08 21:59:30] 2026-02-09 02:58:28,676 | INFO     | ready for new job
[2026-02-08 21:59:30] 2026-02-09 02:58:28,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 21:59:30] 2026-02-09 02:58:28,687 | INFO     | **************************************
[2026-02-08 21:59:30] 2026-02-09 02:58:28,687 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-08 21:59:30] 2026-02-09 02:58:28,687 | INFO     | **************************************
[2026-02-08 21:59:30] 2026-02-09 02:58:28,688 | INFO     | 
[2026-02-08 21:59:30] 2026-02-09 02:58:28,702 | INFO     | architecture information:
[2026-02-08 21:59:30] 2026-02-09 02:58:28,703 | INFO     | executing command: cat /etc/os-release
[2026-02-08 21:59:30] 2026-02-09 02:58:28,742 | INFO     | cat /etc/os-release:
[2026-02-08 21:59:30] NAME="CentOS Linux"
[2026-02-08 21:59:30] VERSION="7 (Core)"
[2026-02-08 21:59:30] ID="centos"
[2026-02-08 21:59:30] ID_LIKE="rhel fedora"
[2026-02-08 21:59:30] VERSION_ID="7"
[2026-02-08 21:59:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 21:59:30] ANSI_COLOR="0;31"
[2026-02-08 21:59:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 21:59:30] HOME_URL="https://www.centos.org/"
[2026-02-08 21:59:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 21:59:30] 
[2026-02-08 21:59:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 21:59:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 21:59:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 21:59:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 21:59:30] 
[2026-02-08 21:59:30] 2026-02-09 02:58:28,743 | INFO     | **************************************
[2026-02-08 21:59:30] 2026-02-09 02:58:29,246 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-08 21:59:30] 2026-02-09 02:58:29,311 | INFO     | sufficient remaining disk space (90800390144 B)
[2026-02-08 21:59:30] 2026-02-09 02:58:29,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 21:59:30] 2026-02-09 02:58:29,312 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 21:59:30] 2026-02-09 02:58:29,313 | INFO     | update_server=False
[2026-02-08 21:59:30] 2026-02-09 02:58:29,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 21:59:30] 2026-02-09 02:58:29,392 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 21:59:30] 2026-02-09 02:58:29,392 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 21:59:30] 2026-02-09 02:58:29,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 21:59:30] 2026-02-09 02:58:29,393 | INFO     | will abort loop
[2026-02-08 21:59:30] 2026-02-09 02:58:29,637 | INFO     | all job control threads have been joined
[2026-02-08 21:59:30] 2026-02-09 02:58:29,875 | INFO     | all data control threads have been joined
[2026-02-08 21:59:30] 2026-02-09 02:58:30,141 | INFO     | all payload control threads have been joined
[2026-02-08 21:59:30] 2026-02-09 02:58:30,319 | INFO     | [job] retrieve thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:30,336 | INFO     | [data] copytool_in thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:30,340 | INFO     | [job] validate thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:30,399 | INFO     | [job] job monitor thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:30,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 21:59:30] 2026-02-09 02:58:30,585 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:30,638 | INFO     | [job] control thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:30,780 | INFO     | [payload] failed_post thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:30,882 | INFO     | [data] control thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:30,906 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:31,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 21:59:30] 2026-02-09 02:58:31,071 | INFO     | [payload] validate_post thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:31,156 | INFO     | [payload] control thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:31,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 21:59:30] 2026-02-09 02:58:31,690 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:31,805 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:32,167 | INFO     | [job] queue monitor thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:32,496 | INFO     | [data] copytool_out thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:35,058 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 21:59:30] 2026-02-09 02:58:58,905 | INFO     | PID=3536060 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-08 21:59:30] 2026-02-09 02:58:58,906 | INFO     | .. there are 17 such processes running
[2026-02-08 21:59:30] 2026-02-09 02:58:58,908 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 21:59:30] 2026-02-09 02:58:58,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 21:59:30] 2026-02-09 02:58:58,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 21:59:30] 2026-02-09 02:59:22,886 | INFO     | [monitor] cgroup control has ended
[2026-02-08 21:59:30] 2026-02-09 02:59:24,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681677231936)>', '<ExcThread(monitor, started 140681301448448)>']
[2026-02-08 21:59:30] 2026-02-09 02:59:25,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 21:59:30] 2026-02-09 02:59:25,074 | INFO     | [monitor] control thread has ended
[2026-02-08 21:59:30] 2026-02-09 02:59:30,021 | INFO     | all workflow threads have been joined
[2026-02-08 21:59:30] 2026-02-09 02:59:30,022 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 21:59:30] 2026-02-09 02:59:30,022 | INFO     | traces error code: 0
[2026-02-08 21:59:30] 2026-02-09 02:59:30,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 21:59:30] 2026-02-09 02:59:30,306 [wrapper] ==== pilot stdout END ====
[2026-02-08 21:59:30] 2026-02-09 02:59:30,312 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 21:59:30] 2026-02-09 02:59:30,319 [wrapper] pilotpid: 3536060
[2026-02-08 21:59:30] 2026-02-09 02:59:30,325 [wrapper] Pilot exit status: 0
[2026-02-08 21:59:30] 2026-02-09 02:59:30,349 [wrapper] pandaids: 6994679139
[2026-02-08 21:59:30] 2026-02-09 02:59:30,530 [wrapper] cleanup supervisor_pilot  254645 3536061
[2026-02-08 21:59:30] 2026-02-09 02:59:30,537 [wrapper] Test setup, not cleaning
[2026-02-08 21:59:30] 2026-02-09 02:59:30,542 [wrapper] apfmon messages muted
[2026-02-08 21:59:30] 2026-02-09 02:59:30,548 [wrapper] ==== wrapper stdout END ====
[2026-02-08 21:59:30] 2026-02-09 02:59:30,553 [wrapper] ==== wrapper stderr END ====
[2026-02-08 21:59:30]  *** Error codes and diagnostics ***
[2026-02-08 21:59:30]     "exeErrorCode": 0,
[2026-02-08 21:59:30]     "exeErrorDiag": "",
[2026-02-08 21:59:30]     "pilotErrorCode": 0,
[2026-02-08 21:59:30]     "pilotErrorDiag": "",
[2026-02-08 21:59:30]  *** Listing of results directory ***
[2026-02-08 21:59:30] total 670604
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas      5111 Jan 31 08:56 queuedata.json
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas    584422 Jan 31 08:56 pilot3.tar.gz
[2026-02-08 21:59:30] -rwx------. 1 boincer umatlas     36322 Jan 31 08:56 runpilot2-wrapper.sh
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas       100 Feb  8 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 21:59:30] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  8 13:22 run_atlas
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas       105 Feb  8 13:22 job.xml
[2026-02-08 21:59:30] -rw-r--r--. 2 boincer umatlas 489797936 Feb  8 13:22 EVNT.48310585._000151.pool.root.1
[2026-02-08 21:59:30] -rw-r--r--. 2 boincer umatlas     15845 Feb  8 13:22 start_atlas.sh
[2026-02-08 21:59:30] drwxrwx--x. 2 boincer umatlas      4096 Feb  8 13:22 shared
[2026-02-08 21:59:30] -rw-r--r--. 2 boincer umatlas    597756 Feb  8 13:22 input.tar.gz
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas         0 Feb  8 13:22 boinc_lockfile
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas      2529 Feb  8 13:22 pandaJob.out
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas        57 Feb  8 13:22 setup.sh.local
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas   1009496 Feb  8 13:23 agis_schedconf.cvmfs.json
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas       439 Feb  8 13:23 workernode_map.json
[2026-02-08 21:59:30] drwx------. 5 boincer umatlas      4096 Feb  8 13:23 pilot3
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas      6860 Feb  8 21:54 init_data.xml
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas 185067989 Feb  8 21:56 HITS.48310589._007917.pool.root.1
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas       532 Feb  8 21:56 boinc_task_state.xml
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas      1036 Feb  8 21:58 memory_monitor_summary.json
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas   1513088 Feb  8 21:58 agis_ddmendpoints.agis.ALL.json
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas    648732 Feb  8 21:58 log.48310589._007917.job.log.tgz.1
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas      6388 Feb  8 21:58 heartbeat.json
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas        95 Feb  8 21:58 pilot_heartbeat.json
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas      8192 Feb  8 21:59 boinc_mmap_file
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas        29 Feb  8 21:59 wrapper_checkpoint.txt
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas      5007 Feb  8 21:59 pilotlog.txt
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas   3291447 Feb  8 21:59 log.48310589._007917.job.log.1
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas       357 Feb  8 21:59 output.list
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas       620 Feb  8 21:59 runtime_log
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas   3962880 Feb  8 21:59 result.tar.gz
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas       660 Feb  8 21:59 tmOKDmxdQ68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsyNKDmX85nun.diag
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas      9352 Feb  8 21:59 runtime_log.err
[2026-02-08 21:59:30] -rw-r--r--. 1 boincer umatlas     21195 Feb  8 21:59 stderr.txt
[2026-02-08 21:59:30] HITS file was successfully produced:
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas 185067989 Feb  8 21:56 shared/HITS.pool.root.1
[2026-02-08 21:59:30]  *** Contents of shared directory: ***
[2026-02-08 21:59:30] total 663532
[2026-02-08 21:59:30] -rw-r--r--. 2 boincer umatlas 489797936 Feb  8 13:22 ATLAS.root_0
[2026-02-08 21:59:30] -rw-r--r--. 2 boincer umatlas     15845 Feb  8 13:22 start_atlas.sh
[2026-02-08 21:59:30] -rw-r--r--. 2 boincer umatlas    597756 Feb  8 13:22 input.tar.gz
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas 185067989 Feb  8 21:56 HITS.pool.root.1
[2026-02-08 21:59:30] -rw-------. 1 boincer umatlas   3962880 Feb  8 21:59 result.tar.gz
21:59:32 (3531551): run_atlas exited; CPU time 105155.260533
21:59:32 (3531551): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN