Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-09 07:03:56 (3152): vboxwrapper version 26210
2026-02-09 07:03:56 (3152): BOINC client version: 7.16.5
2026-02-09 07:03:57 (3152): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-02-09 07:03:57 (3152): Successfully copied 'init_data.xml' to the shared directory.
2026-02-09 07:03:57 (3152): Create VM. (boinc_8994cc6ce1d4fe0a, slot#5)
2026-02-09 07:03:58 (3152): Setting Memory Size for VM. (4400MB)
2026-02-09 07:03:58 (3152): Setting CPU Count for VM. (4)
2026-02-09 07:03:58 (3152): Setting Chipset Options for VM.
2026-02-09 07:03:58 (3152): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-09 07:03:59 (3152): Setting Boot Options for VM.
2026-02-09 07:03:59 (3152): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-09 07:03:59 (3152): Enabling VM Network Access.
2026-02-09 07:04:00 (3152): Disabling USB Support for VM.
2026-02-09 07:04:00 (3152): Disabling COM Port Support for VM.
2026-02-09 07:04:00 (3152): Disabling LPT Port Support for VM.
2026-02-09 07:04:00 (3152): Disabling Audio Support for VM.
2026-02-09 07:04:01 (3152): Disabling Clipboard Support for VM.
2026-02-09 07:04:01 (3152): Disabling Drag and Drop Support for VM.
2026-02-09 07:04:01 (3152): Adding storage controller(s) to VM.
2026-02-09 07:04:01 (3152): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-09 07:04:02 (3152): Adding VirtualBox Guest Additions to VM.
2026-02-09 07:04:02 (3152): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-09 07:04:02 (3152): forwarding host port 49323 to guest port 80
2026-02-09 07:04:03 (3152): Enabling remote desktop for VM.
2026-02-09 07:04:03 (3152): Enabling shared directory for VM.
2026-02-09 07:04:04 (3152): Starting VM using VBoxManage interface. (boinc_8994cc6ce1d4fe0a, slot#5)
2026-02-09 07:04:08 (3152): Successfully started VM. (PID = '2328')
2026-02-09 07:04:08 (3152): Reporting VM Process ID to BOINC.
2026-02-09 07:04:08 (3152): Guest Log: BIOS: VirtualBox 5.2.44
2026-02-09 07:04:08 (3152): Guest Log: CPUID EDX: 0x178bfbff
2026-02-09 07:04:08 (3152): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-09 07:04:08 (3152): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-09 07:04:08 (3152): Detected: Web Application Enabled (http://localhost:49323)
2026-02-09 07:04:08 (3152): Detected: Remote Desktop Enabled (localhost:49324)
2026-02-09 07:04:08 (3152): Preference change detected
2026-02-09 07:04:08 (3152): Setting CPU throttle for VM. (100%)
2026-02-09 07:04:08 (3152): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-09 07:04:10 (3152): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-09 07:04:10 (3152): Guest Log: BIOS: Booting from Hard Disk...
2026-02-09 07:04:13 (3152): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-09 07:04:13 (3152): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-09 07:04:13 (3152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-09 07:04:18 (3152): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-09 07:04:18 (3152): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-09 07:04:23 (3152): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-09 07:04:23 (3152): Guest Log: 00:00:00.000145 main     Log opened 2026-02-09T07:04:21.904891000Z
2026-02-09 07:04:23 (3152): Guest Log: 00:00:00.000233 main     OS Product: Linux
2026-02-09 07:04:23 (3152): Guest Log: 00:00:00.000257 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-09 07:04:23 (3152): Guest Log: 00:00:00.000277 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-09 07:04:23 (3152): Guest Log: 00:00:00.000303 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-09 07:04:23 (3152): Guest Log: 00:00:00.000304 main     Process ID: 1308
2026-02-09 07:04:23 (3152): Guest Log: 00:00:00.000305 main     Package type: LINUX_64BITS_GENERIC
2026-02-09 07:04:23 (3152): Guest Log: 00:00:00.001413 main     5.2.32 r132073 started. Verbose level = 0
2026-02-09 07:04:24 (3152): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-09 07:04:24 (3152): Guest Log: [INFO] Mounting shared directory
2026-02-09 07:04:24 (3152): Guest Log: [INFO] Checking for init_data.xml
2026-02-09 07:04:28 (3152): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-09 07:04:28 (3152): Guest Log: [INFO] Detected branch: prod
2026-02-09 07:04:28 (3152): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-09 07:04:28 (3152): Guest Log: Copying input files
2026-02-09 07:04:32 (3152): Guest Log: Copied input files into RunAtlas.
2026-02-09 07:04:32 (3152): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-09 07:04:32 (3152): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-09 07:04:32 (3152): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-09 07:04:32 (3152): Guest Log: Further information can be found at the LHC@home message board.
2026-02-09 07:04:33 (3152): Guest Log: 00:00:10.003800 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 496 739 000ns (GuestNow=1 770 613 473 411 380 000 ns GuestLast=1 770 620 661 908 119 000 ns fSetTimeLastLoop=true )
2026-02-09 07:04:42 (3152): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-09 07:04:42 (3152): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-09 07:04:42 (3152): Guest Log: 2.6.3.0 1585 0 31968 156044 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-09 07:04:43 (3152): Guest Log: copied the webapp to /var/www
2026-02-09 07:04:43 (3152): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-09 07:04:43 (3152): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-09 07:04:43 (3152): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-09 07:04:43 (3152): Guest Log:  *** Starting ATLAS job. (PandaID=7004654501 taskID=48318034) ***
2026-02-09 08:44:11 (3152): Status Report: Elapsed Time: '6000.000000'
2026-02-09 08:44:11 (3152): Status Report: CPU Time: '22095.078125'
2026-02-09 10:24:14 (3152): Status Report: Elapsed Time: '12000.000000'
2026-02-09 10:24:14 (3152): Status Report: CPU Time: '45199.953125'
2026-02-09 10:24:16 (3152): Guest Log:  *** Job finished ***
2026-02-09 10:24:16 (3152): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:23:58,131 | INFO     | all workflow threads have been joined
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:23:58,131 | INFO     | end of generic workflow (traces error code: 0)
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:23:58,132 | INFO     | traces error code: 0
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:23:58,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,299 | INFO     | PID=5986 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,299 | INFO     | found 0 job(s) in 20 queues
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,300 | INFO     | [monitor] control thread has ended
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,412 [wrapper] ==== pilot stdout END ====
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,416 [wrapper] ==== wrapper stdout RESUME ====
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,421 [wrapper] pilotpid: 5986
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,425 [wrapper] Pilot exit status: 0
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,471 [wrapper] pandaids: 7004654501
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,498 [wrapper] cleanup supervisor_pilot 27268 5987
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,505 [wrapper] Test setup, not cleaning
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,511 [wrapper] apfmon messages muted
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,516 [wrapper] ==== wrapper stdout END ====
2026-02-09 10:24:16 (3152): Guest Log: 2026-02-09 08:24:15,521 [wrapper] ==== wrapper stderr END ====
2026-02-09 10:24:16 (3152): Guest Log:  *** Error codes and diagnostics ***
2026-02-09 10:24:16 (3152): Guest Log:     "exeErrorCode": 0,
2026-02-09 10:24:16 (3152): Guest Log:     "exeErrorDiag": "",
2026-02-09 10:24:16 (3152): Guest Log:     "pilotErrorCode": 0,
2026-02-09 10:24:16 (3152): Guest Log:     "pilotErrorDiag": "",
2026-02-09 10:24:16 (3152): Guest Log:  *** Listing of results directory ***
2026-02-09 10:24:16 (3152): Guest Log: total 186976
2026-02-09 10:24:16 (3152): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  8 11:49 pilot3.tar.gz
2026-02-09 10:24:16 (3152): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  8 11:50 runpilot2-wrapper.sh
2026-02-09 10:24:16 (3152): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  8 11:51 queuedata.json
2026-02-09 10:24:16 (3152): Guest Log: -rwxr-xr-x. 1 atlas atlas      8897 Feb  9 05:04 init_data.xml
2026-02-09 10:24:16 (3152): Guest Log: -rwxr-xr-x. 1 atlas atlas    597959 Feb  9 05:04 input.tar.gz
2026-02-09 10:24:16 (3152): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  9 05:04 start_atlas.sh
2026-02-09 10:24:16 (3152): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  9 05:04 EVNT.48318032._000219.pool.root.1 -> /data/./ATLAS.root_0
2026-02-09 10:24:16 (3152): Guest Log: -rw-r--r--. 1 atlas atlas      2537 Feb  9 05:04 pandaJob.out
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas   1009504 Feb  9 05:05 agis_schedconf.cvmfs.json
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas       426 Feb  9 05:05 workernode_map.json
2026-02-09 10:24:16 (3152): Guest Log: drwx------. 5 atlas atlas      4096 Feb  9 05:05 pilot3
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas 183504982 Feb  9 08:23 HITS.48318034._012604.pool.root.1
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas      1033 Feb  9 08:23 memory_monitor_summary.json
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas   1513144 Feb  9 08:23 agis_ddmendpoints.agis.ALL.json
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas    381424 Feb  9 08:23 log.48318034._012604.job.log.tgz.1
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas      6377 Feb  9 08:23 heartbeat.json
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas        95 Feb  9 08:24 pilot_heartbeat.json
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas       744 Feb  9 08:24 pilotlog.txt
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas   1663075 Feb  9 08:24 log.48318034._012604.job.log.1
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas       357 Feb  9 08:24 output.list
2026-02-09 10:24:16 (3152): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  9 08:24 runtime_log
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas   2058240 Feb  9 08:24 result.tar.gz
2026-02-09 10:24:16 (3152): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Feb  9 08:24 runtime_log.err
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas       670 Feb  9 08:24 pLcNDmJUI98n9Rq4apOajLDm4fhM0noT9bVooX4SDm56cKDmRFN8En.diag
2026-02-09 10:24:16 (3152): Guest Log: Looking for outputfile HITS.48318034._012604.pool.root.1
2026-02-09 10:24:16 (3152): Guest Log: HITS file was successfully produced
2026-02-09 10:24:16 (3152): Guest Log: -rw-------. 1 atlas atlas 183504982 Feb  9 08:23 /home/atlas/RunAtlas/HITS.48318034._012604.pool.root.1
2026-02-09 10:24:17 (3152): Guest Log: Successfully finished the ATLAS job!
2026-02-09 10:24:17 (3152): Guest Log: Copying the results back to the shared directory!
2026-02-09 10:24:17 (3152): Guest Log:  *** Contents of shared directory: ***
2026-02-09 10:24:17 (3152): Guest Log: total 668864
2026-02-09 10:24:17 (3152): Guest Log: -rwxrwxrwx. 1 root root 498718108 Feb  9 05:03 ATLAS.root_0
2026-02-09 10:24:17 (3152): Guest Log: -rwxrwxrwx. 1 root root 183504982 Feb  9 08:24 HITS.pool.root.1
2026-02-09 10:24:17 (3152): Guest Log: -rwxrwxrwx. 1 root root      8897 Feb  9 05:03 init_data.xml
2026-02-09 10:24:17 (3152): Guest Log: -rwxrwxrwx. 1 root root    597959 Feb  8 18:12 input.tar.gz
2026-02-09 10:24:17 (3152): Guest Log: -rwxrwxrwx. 1 root root   2058240 Feb  9 08:24 result.tar.gz
2026-02-09 10:24:17 (3152): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  8 18:12 start_atlas.sh
2026-02-09 10:24:17 (3152): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-09 10:24:17 (3152): VM Completion File Detected.
2026-02-09 10:24:17 (3152): Powering off VM.
2026-02-09 10:24:18 (3152): Successfully stopped VM.
2026-02-09 10:24:18 (3152): Deregistering VM. (boinc_8994cc6ce1d4fe0a, slot#5)
2026-02-09 10:24:18 (3152): Removing network bandwidth throttle group from VM.
2026-02-09 10:24:18 (3152): Removing VM from VirtualBox.
2026-02-09 10:24:23 (3152): called boinc_finish(0)

</stderr_txt>
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