Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:23:52 (333083): wrapper (7.7.26015): starting
14:23:52 (333083): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 14:23:52] Arguments: --nthreads 12
[2026-02-08 14:23:52] Threads: 12
[2026-02-08 14:23:52] Checking for CVMFS
[2026-02-08 14:23:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 14:23:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 14:23:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 14:23:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 14:23:53] 2.11.5.0 2627273 100362 242552 156035 3 234 28465171 45568000 24754 130560 0 794108326 99.816 467712450 24626 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-08 14:23:53] CVMFS is ok
[2026-02-08 14:23:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 14:23:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 14:23:53] Further information can be found at the LHC@home message board.
[2026-02-08 14:23:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 14:23:53] Checking for apptainer binary...
[2026-02-08 14:23:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 14:23:53] Running /usr/bin/apptainer --version
[2026-02-08 14:23:53] apptainer version 1.4.1-1.el9
[2026-02-08 14:23:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 14:23:53] wns0095.triumf.lcg
[2026-02-08 14:23:53] apptainer works
[2026-02-08 14:23:53] Set ATHENA_PROC_NUMBER=12
[2026-02-08 14:23:53] Set ATHENA_CORE_NUMBER=12
[2026-02-08 14:23:53] Starting ATLAS job with PandaID=7005746838
[2026-02-08 14:23:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 14:29:01]  *** The last 200 lines of the pilot log: ***
[2026-02-08 14:29:01] 2026-02-08 22:28:28,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | WARNING  | wrong length of table data, x=[1770589543.0], y=[3311.0] (must be same and length>=4)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | could have reported an average CPU frequency of 2787 MHz (4 samples)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | ..............................
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | . Timing measurements:
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | . get job = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . initial setup = 17 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . payload setup = 21 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . stage-in = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . payload execution = 65 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . stage-out = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . log creation = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | ..............................
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7005746838/pilotlog.txt
[2026-02-08 14:29:01] 2026-02-08 22:28:28,196 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-08 14:29:01] - Log from pilotlog.txt -
[2026-02-08 14:29:01] 2026-02-08 22:28:28,139 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7005746838/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,139 | INFO     | extracted standard info from prmon json
[2026-02-08 14:29:01] 2026-02-08 22:28:28,139 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 14:29:01] 2026-02-08 22:28:28,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | WARNING  | wrong length of table data, x=[1770589543.0], y=[3311.0] (must be same and length>=4)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | could have reported an average CPU frequency of 2787 MHz (4 samples)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | ..............................
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | . Timing measurements:
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | . get job = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . initial setup = 17 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . payload setup = 21 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . stage-in = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . payload execution = 65 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . stage-out = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . log creation = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | ..............................
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7005746838/pilotlog.txt
[2026-02-08 14:29:01] 2026-02-08 22:28:28,196 | WARNING  | 
[2026-02-08 14:29:01] [begin log extracts]
[2026-02-08 14:29:01] - Log from pilotlog.txt -
[2026-02-08 14:29:01] 2026-02-08 22:28:28,139 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7005746838/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,139 | INFO     | extracted standard info from prmon json
[2026-02-08 14:29:01] 2026-02-08 22:28:28,139 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 14:29:01] 2026-02-08 22:28:28,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | WARNING  | wrong length of table data, x=[1770589543.0], y=[3311.0] (must be same and length>=4)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | could have reported an average CPU frequency of 2787 MHz (4 samples)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | ..............................
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | . Timing measurements:
[2026-02-08 14:29:01] 2026-02-08 22:28:28,140 | INFO     | . get job = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . initial setup = 17 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . payload setup = 21 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . stage-in = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . payload execution = 65 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . stage-out = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | . log creation = 0 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | ..............................
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 14:29:01] 2026-02-08 22:28:28,141 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7005746838/pilotlog.txt
[2026-02-08 14:29:01] [end log extracts]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,197 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,197 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-08 14:29:01] 2026-02-08 22:28:28,731 | INFO     | 
[2026-02-08 14:29:01] 2026-02-08 22:28:28,731 | INFO     | job summary report
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | --------------------------------------------------
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | PanDA job id: 7005746838
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | task id: 48318010
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-08 14:26:17,275 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | pilot state: failed 
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | transexitcode: 65
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | exeerrorcode: 65
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | exitcode: 65
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | cpuconsumptiontime: 13 s
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | nevents: 0
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | neventsw: 0
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | pid: 342780
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | pgrp: 342780
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | corecount: 12
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | event service: False
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | sizes: {0: 2283093, 11: 2283093, 91: 2306521, 92: 2310813, 95: 2310841, 213: 2311007}
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | --------------------------------------------------
[2026-02-08 14:29:01] 2026-02-08 22:28:28,732 | INFO     | 
[2026-02-08 14:29:01] 2026-02-08 22:28:28,733 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-08 14:29:01] 2026-02-08 22:28:28,802 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,802 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,802 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,802 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | job 7005746838 has completed (purged errors)
[2026-02-08 14:29:01] 2026-02-08 22:28:28,803 | INFO     | overall cleanup function is called
[2026-02-08 14:29:01] 2026-02-08 22:28:29,818 | INFO     | --- collectZombieJob: --- 10, [342780]
[2026-02-08 14:29:01] 2026-02-08 22:28:29,818 | INFO     | zombie collector waiting for pid 342780
[2026-02-08 14:29:01] 2026-02-08 22:28:29,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 14:29:01] 2026-02-08 22:28:29,818 | INFO     | collected zombie processes
[2026-02-08 14:29:01] 2026-02-08 22:28:29,818 | INFO     | will attempt to kill all subprocesses of pid=342780
[2026-02-08 14:29:01] 2026-02-08 22:28:30,553 | INFO     | process IDs to be killed: [342780] (in reverse order)
[2026-02-08 14:29:01] 2026-02-08 22:28:30,631 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 14:29:01] 2026-02-08 22:28:30,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 14:29:01] 2026-02-08 22:28:30,657 | INFO     | did not find any defunct processes belonging to 342780
[2026-02-08 14:29:01] 2026-02-08 22:28:30,680 | INFO     | did not find any defunct processes belonging to 342780
[2026-02-08 14:29:01] 2026-02-08 22:28:30,681 | INFO     | ready for new job
[2026-02-08 14:29:01] 2026-02-08 22:28:30,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 14:29:01] 2026-02-08 22:28:30,687 | INFO     | **************************************
[2026-02-08 14:29:01] 2026-02-08 22:28:30,687 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 14:29:01] 2026-02-08 22:28:30,687 | INFO     | **************************************
[2026-02-08 14:29:01] 2026-02-08 22:28:30,687 | INFO     | 
[2026-02-08 14:29:01] 2026-02-08 22:28:30,689 | INFO     | architecture information:
[2026-02-08 14:29:01] 2026-02-08 22:28:30,693 | INFO     | executing command: cat /etc/os-release
[2026-02-08 14:29:01] 2026-02-08 22:28:30,718 | INFO     | cat /etc/os-release:
[2026-02-08 14:29:01] NAME="CentOS Linux"
[2026-02-08 14:29:01] VERSION="7 (Core)"
[2026-02-08 14:29:01] ID="centos"
[2026-02-08 14:29:01] ID_LIKE="rhel fedora"
[2026-02-08 14:29:01] VERSION_ID="7"
[2026-02-08 14:29:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 14:29:01] ANSI_COLOR="0;31"
[2026-02-08 14:29:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 14:29:01] HOME_URL="https://www.centos.org/"
[2026-02-08 14:29:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 14:29:01] 
[2026-02-08 14:29:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 14:29:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 14:29:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 14:29:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 14:29:01] 
[2026-02-08 14:29:01] 2026-02-08 22:28:30,718 | INFO     | **************************************
[2026-02-08 14:29:01] 2026-02-08 22:28:31,222 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-08 14:29:01] 2026-02-08 22:28:31,266 | INFO     | sufficient remaining disk space (2144691290112 B)
[2026-02-08 14:29:01] 2026-02-08 22:28:31,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 14:29:01] 2026-02-08 22:28:31,267 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 14:29:01] 2026-02-08 22:28:31,267 | INFO     | update_server=False
[2026-02-08 14:29:01] 2026-02-08 22:28:31,267 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 14:29:01] 2026-02-08 22:28:31,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 14:29:01] 2026-02-08 22:28:31,268 | INFO     | aborting loop
[2026-02-08 14:29:01] 2026-02-08 22:28:31,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 14:29:01] 2026-02-08 22:28:31,737 | INFO     | all data control threads have been joined
[2026-02-08 14:29:01] 2026-02-08 22:28:32,272 | INFO     | [job] retrieve thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:32,279 | INFO     | all job control threads have been joined
[2026-02-08 14:29:01] 2026-02-08 22:28:32,301 | INFO     | [job] job monitor thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:32,437 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:32,592 | INFO     | [payload] validate_post thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:32,685 | INFO     | all payload control threads have been joined
[2026-02-08 14:29:01] 2026-02-08 22:28:32,742 | INFO     | [data] control thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:32,778 | INFO     | [job] validate thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:32,853 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:32,983 | INFO     | [data] copytool_in thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:33,186 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:33,285 | INFO     | [job] control thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:33,286 | INFO     | [data] copytool_out thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:33,399 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:33,691 | INFO     | [payload] control thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:33,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 14:29:01] 2026-02-08 22:28:33,882 | INFO     | [payload] failed_post thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:34,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 14:29:01] 2026-02-08 22:28:34,754 | INFO     | [job] queue monitor thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:38,359 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 14:29:01] 2026-02-08 22:28:44,422 | INFO     | [monitor] cgroup control has ended
[2026-02-08 14:29:01] 2026-02-08 22:28:45,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140495043061568)>', '<ExcThread(monitor, started 140494638126848)>']
[2026-02-08 14:29:01] 2026-02-08 22:28:50,284 | INFO     | all workflow threads have been joined
[2026-02-08 14:29:01] 2026-02-08 22:28:50,284 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 14:29:01] 2026-02-08 22:28:50,284 | INFO     | traces error code: 0
[2026-02-08 14:29:01] 2026-02-08 22:28:50,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 14:29:01] 2026-02-08 22:29:01,391 | INFO     | PID=336902 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-08 14:29:01] 2026-02-08 22:29:01,391 | INFO     | .. there are 35 such processes running
[2026-02-08 14:29:01] 2026-02-08 22:29:01,392 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 14:29:01] 2026-02-08 22:29:01,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 14:29:01] 2026-02-08 22:29:01,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 14:29:01] 2026-02-08 22:29:01,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 14:29:01] 2026-02-08 22:29:01,392 | INFO     | [monitor] control thread has ended
[2026-02-08 14:29:01] 2026-02-08 22:29:01,489 [wrapper] ==== pilot stdout END ====
[2026-02-08 14:29:01] 2026-02-08 22:29:01,490 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 14:29:01] 2026-02-08 22:29:01,492 [wrapper] pilotpid: 336902
[2026-02-08 14:29:01] 2026-02-08 22:29:01,494 [wrapper] Pilot exit status: 0
[2026-02-08 14:29:01] 2026-02-08 22:29:01,521 [wrapper] pandaids: 7005746838
[2026-02-08 14:29:01] 2026-02-08 22:29:01,565 [wrapper] cleanup supervisor_pilot  336908 336903
[2026-02-08 14:29:01] 2026-02-08 22:29:01,567 [wrapper] Test setup, not cleaning
[2026-02-08 14:29:01] 2026-02-08 22:29:01,569 [wrapper] apfmon messages muted
[2026-02-08 14:29:01] 2026-02-08 22:29:01,571 [wrapper] ==== wrapper stdout END ====
[2026-02-08 14:29:01] 2026-02-08 22:29:01,573 [wrapper] ==== wrapper stderr END ====
[2026-02-08 14:29:01]  *** Error codes and diagnostics ***
[2026-02-08 14:29:01]     "exeErrorCode": 65,
[2026-02-08 14:29:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-08 14:29:01]     "pilotErrorCode": 1305,
[2026-02-08 14:29:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-08 14:29:01]  *** Listing of results directory ***
[2026-02-08 14:29:01] total 491324
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc    584627 Feb  8 09:49 pilot3.tar.gz
[2026-02-08 14:29:01] -rwx------. 1 boinc boinc     36322 Feb  8 09:50 runpilot2-wrapper.sh
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc      5111 Feb  8 09:51 queuedata.json
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc       100 Feb  8 14:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 14:29:01] -rwxr-xr-x. 1 boinc boinc      7986 Feb  8 14:23 run_atlas
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc       105 Feb  8 14:23 job.xml
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc      6594 Feb  8 14:23 init_data.xml
[2026-02-08 14:29:01] -rw-r--r--. 2 boinc boinc 498954258 Feb  8 14:23 EVNT.48318008._000241.pool.root.1
[2026-02-08 14:29:01] -rw-r--r--. 2 boinc boinc     15845 Feb  8 14:23 start_atlas.sh
[2026-02-08 14:29:01] drwxrwx--x. 2 boinc boinc      4096 Feb  8 14:23 shared
[2026-02-08 14:29:01] -rw-r--r--. 2 boinc boinc    597956 Feb  8 14:23 input.tar.gz
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc         0 Feb  8 14:23 boinc_lockfile
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc      2528 Feb  8 14:23 pandaJob.out
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc   1009504 Feb  8 14:24 agis_schedconf.cvmfs.json
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc   1513088 Feb  8 14:24 agis_ddmendpoints.agis.ALL.json
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc       444 Feb  8 14:24 workernode_map.json
[2026-02-08 14:29:01] drwx------. 5 boinc boinc      4096 Feb  8 14:24 pilot3
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc       524 Feb  8 14:26 boinc_task_state.xml
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc       957 Feb  8 14:26 memory_monitor_summary.json
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc     22563 Feb  8 14:26 log.48318010._013506.job.log.tgz.1
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc      7042 Feb  8 14:28 heartbeat.json
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc      8192 Feb  8 14:29 boinc_mmap_file
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc        22 Feb  8 14:29 wrapper_checkpoint.txt
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc       822 Feb  8 14:29 pilotlog.txt
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc        95 Feb  8 14:29 pilot_heartbeat.json
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc     89025 Feb  8 14:29 log.48318010._013506.job.log.1
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc       188 Feb  8 14:29 output.list
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc       620 Feb  8 14:29 runtime_log
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc    133120 Feb  8 14:29 result.tar.gz
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc      8635 Feb  8 14:29 runtime_log.err
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc       643 Feb  8 14:29 1UUNDml6N98n9Rq4apOajLDm4fhM0noT9bVooX4SDmTXdKDmaUlRHo.diag
[2026-02-08 14:29:01] -rw-r--r--. 1 boinc boinc     21757 Feb  8 14:29 stderr.txt
[2026-02-08 14:29:01] No HITS result produced
[2026-02-08 14:29:01]  *** Contents of shared directory: ***
[2026-02-08 14:29:01] total 488000
[2026-02-08 14:29:01] -rw-r--r--. 2 boinc boinc 498954258 Feb  8 14:23 ATLAS.root_0
[2026-02-08 14:29:01] -rw-r--r--. 2 boinc boinc     15845 Feb  8 14:23 start_atlas.sh
[2026-02-08 14:29:01] -rw-r--r--. 2 boinc boinc    597956 Feb  8 14:23 input.tar.gz
[2026-02-08 14:29:01] -rw-------. 1 boinc boinc    133120 Feb  8 14:29 result.tar.gz
14:29:02 (333083): run_atlas exited; CPU time 22.223161
14:29:02 (333083): called boinc_finish(0)

</stderr_txt>
]]>

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