Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:49:00 (29600): wrapper (7.7.26015): starting
12:49:00 (29600): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 12:49:00] Arguments: --nthreads 12
[2026-02-08 12:49:00] Threads: 12
[2026-02-08 12:49:00] Checking for CVMFS
[2026-02-08 12:49:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 12:49:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 12:49:00] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 12:49:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 12:49:01] 2.11.2.0 2979 394563 107928 156028 1 52 20088499 20275201 1 130560 2 168682053 99.954 22801185 16653 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-08 12:49:01] CVMFS is ok
[2026-02-08 12:49:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 12:49:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 12:49:01] Further information can be found at the LHC@home message board.
[2026-02-08 12:49:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 12:49:01] Checking for apptainer binary...
[2026-02-08 12:49:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 12:49:01] Running /usr/bin/apptainer --version
[2026-02-08 12:49:01] apptainer version 1.3.2-1.el7
[2026-02-08 12:49:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 12:49:02] c-205-7.aglt2.org
[2026-02-08 12:49:02] apptainer works
[2026-02-08 12:49:02] Set ATHENA_PROC_NUMBER=12
[2026-02-08 12:49:02] Set ATHENA_CORE_NUMBER=12
[2026-02-08 12:49:02] Starting ATLAS job with PandaID=7005045040
[2026-02-08 12:49:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 13:53:52]  *** The last 200 lines of the pilot log: ***
[2026-02-08 13:53:52]  guid=7e7d9b1a-5a34-4d98-bc09-5fb5e89c9679
[2026-02-08 13:53:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 13:53:52]  is_altstaged=None
[2026-02-08 13:53:52]  is_tar=False
[2026-02-08 13:53:52]  lfn=log.48310749._008167.job.log.tgz.1
[2026-02-08 13:53:52]  mtime=0
[2026-02-08 13:53:52]  protocol_id=None
[2026-02-08 13:53:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 13:53:52]  replicas=None
[2026-02-08 13:53:52]  scope=mc23_13p6TeV
[2026-02-08 13:53:52]  status=None
[2026-02-08 13:53:52]  status_code=0
[2026-02-08 13:53:52]  storage_token=
[2026-02-08 13:53:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7005045040/log.48310749._008167.job.log.tgz.1
[2026-02-08 13:53:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/a4/log.48310749._008167.job.log.tgz.1
[2026-02-08 13:53:52]  workdir=None
[2026-02-08 13:53:52] ]
[2026-02-08 13:53:52] 2026-02-08 18:53:18,921 | INFO     | transferring file log.48310749._008167.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7005045040/log.48310749._008167.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-08 13:53:52] 2026-02-08 18:53:18,921 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7005045040/log.48310749._008167.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310749._008167.job
[2026-02-08 13:53:52] 2026-02-08 18:53:18,944 | INFO     | adding to output.list: log.48310749._008167.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/a4/log.48310749._008167.job.log.tg
[2026-02-08 13:53:52] 2026-02-08 18:53:18,945 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 13:53:52] 2026-02-08 18:53:18,945 | INFO     | summary of transferred files:
[2026-02-08 13:53:52] 2026-02-08 18:53:18,945 | INFO     |  -- lfn=log.48310749._008167.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 13:53:52] 2026-02-08 18:53:18,946 | INFO     | stage-out finished correctly
[2026-02-08 13:53:52] 2026-02-08 18:53:19,030 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 13:53:52] 2026-02-08 18:53:19,696 | INFO     | PID=1175 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-08 13:53:52] 2026-02-08 18:53:20,440 | INFO     | job 7005045040 has state=finished
[2026-02-08 13:53:52] 2026-02-08 18:53:20,440 | INFO     | preparing for final server update for job 7005045040 in state='finished'
[2026-02-08 13:53:52] 2026-02-08 18:53:20,440 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7005045040/jobReport.json
[2026-02-08 13:53:52] 2026-02-08 18:53:20,444 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-08 13:53:52] 2026-02-08 18:53:20,444 | INFO     | this job has now completed (state=finished)
[2026-02-08 13:53:52] 2026-02-08 18:53:20,444 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 13:53:52] 2026-02-08 18:53:20,445 | INFO     | log transfer has been attempted: DONE
[2026-02-08 13:53:52] 2026-02-08 18:53:20,445 | INFO     | job 7005045040 has finished - writing final server update
[2026-02-08 13:53:52] 2026-02-08 18:53:20,445 | INFO     | total number of processed events: 400 (read)
[2026-02-08 13:53:52] 2026-02-08 18:53:20,447 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7005045040/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 13:53:52] 2026-02-08 18:53:20,448 | INFO     | extracted standard info from prmon json
[2026-02-08 13:53:52] 2026-02-08 18:53:20,448 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 13:53:52] 2026-02-08 18:53:20,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 13:53:52] 2026-02-08 18:53:20,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 13:53:52] 2026-02-08 18:53:20,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 13:53:52] 2026-02-08 18:53:20,449 | INFO     | fitting pss+swap vs Time
[2026-02-08 13:53:52] 2026-02-08 18:53:20,449 | INFO     | sum of square deviations: 54438230.0
[2026-02-08 13:53:52] 2026-02-08 18:53:20,450 | INFO     | sum of deviations: -5978750178.0
[2026-02-08 13:53:52] 2026-02-08 18:53:20,450 | INFO     | mean x: 1770574969.5
[2026-02-08 13:53:52] 2026-02-08 18:53:20,450 | INFO     | mean y: 2783526.785714286
[2026-02-08 13:53:52] 2026-02-08 18:53:20,450 | INFO     | intersect: 194458507272.03732
[2026-02-08 13:53:52] 2026-02-08 18:53:20,450 | INFO     | chi2: 0.04155381309248742
[2026-02-08 13:53:52] 2026-02-08 18:53:20,450 | INFO     | current memory leak: -109.83 B/s (using 56 data points, chi2=0.04)
[2026-02-08 13:53:52] 2026-02-08 18:53:20,451 | INFO     | could have reported an average CPU frequency of 1718 MHz (6 samples)
[2026-02-08 13:53:52] 2026-02-08 18:53:20,451 | INFO     | ..............................
[2026-02-08 13:53:52] 2026-02-08 18:53:20,451 | INFO     | . Timing measurements:
[2026-02-08 13:53:52] 2026-02-08 18:53:20,451 | INFO     | . get job = 0 s
[2026-02-08 13:53:52] 2026-02-08 18:53:20,451 | INFO     | . initial setup = 7 s
[2026-02-08 13:53:52] 2026-02-08 18:53:20,451 | INFO     | . payload setup = 7 s
[2026-02-08 13:53:52] 2026-02-08 18:53:20,451 | INFO     | . stage-in = 0 s
[2026-02-08 13:53:52] 2026-02-08 18:53:20,452 | INFO     | . payload execution = 3812 s
[2026-02-08 13:53:52] 2026-02-08 18:53:20,452 | INFO     | . stage-out = 0 s
[2026-02-08 13:53:52] 2026-02-08 18:53:20,452 | INFO     | . log creation = 0 s
[2026-02-08 13:53:52] 2026-02-08 18:53:20,452 | INFO     | ..............................
[2026-02-08 13:53:52] 2026-02-08 18:53:20,529 | INFO     | 
[2026-02-08 13:53:52] 2026-02-08 18:53:20,529 | INFO     | job summary report
[2026-02-08 13:53:52] 2026-02-08 18:53:20,530 | INFO     | --------------------------------------------------
[2026-02-08 13:53:52] 2026-02-08 18:53:20,530 | INFO     | PanDA job id: 7005045040
[2026-02-08 13:53:52] 2026-02-08 18:53:20,530 | INFO     | task id: 48310749
[2026-02-08 13:53:52] 2026-02-08 18:53:20,530 | INFO     | errors: (none)
[2026-02-08 13:53:52] 2026-02-08 18:53:20,530 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 13:53:52] 2026-02-08 18:53:20,531 | INFO     | pilot state: finished 
[2026-02-08 13:53:52] 2026-02-08 18:53:20,531 | INFO     | transexitcode: 0
[2026-02-08 13:53:52] 2026-02-08 18:53:20,531 | INFO     | exeerrorcode: 0
[2026-02-08 13:53:52] 2026-02-08 18:53:20,531 | INFO     | exeerrordiag: 
[2026-02-08 13:53:52] 2026-02-08 18:53:20,531 | INFO     | exitcode: 0
[2026-02-08 13:53:52] 2026-02-08 18:53:20,531 | INFO     | exitmsg: OK
[2026-02-08 13:53:52] 2026-02-08 18:53:20,532 | INFO     | cpuconsumptiontime: 41253 s
[2026-02-08 13:53:52] 2026-02-08 18:53:20,532 | INFO     | nevents: 400
[2026-02-08 13:53:52] 2026-02-08 18:53:20,532 | INFO     | neventsw: 0
[2026-02-08 13:53:52] 2026-02-08 18:53:20,532 | INFO     | pid: 5729
[2026-02-08 13:53:52] 2026-02-08 18:53:20,532 | INFO     | pgrp: 5729
[2026-02-08 13:53:52] 2026-02-08 18:53:20,532 | INFO     | corecount: 12
[2026-02-08 13:53:52] 2026-02-08 18:53:20,533 | INFO     | event service: False
[2026-02-08 13:53:52] 2026-02-08 18:53:20,533 | INFO     | sizes: {0: 2282833, 1: 2283039, 11: 2283067, 3823: 2308819, 3824: 2317873, 3826: 2318011}
[2026-02-08 13:53:52] 2026-02-08 18:53:20,533 | INFO     | --------------------------------------------------
[2026-02-08 13:53:52] 2026-02-08 18:53:20,533 | INFO     | 
[2026-02-08 13:53:52] 2026-02-08 18:53:20,533 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-08 13:53:52] 2026-02-08 18:53:20,557 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,557 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,557 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,557 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,560 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 13:53:52] 2026-02-08 18:53:20,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,560 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 13:53:52] 2026-02-08 18:53:20,560 | INFO     | job 7005045040 has completed (purged errors)
[2026-02-08 13:53:52] 2026-02-08 18:53:20,561 | INFO     | overall cleanup function is called
[2026-02-08 13:53:52] 2026-02-08 18:53:21,569 | INFO     | --- collectZombieJob: --- 10, [5729]
[2026-02-08 13:53:52] 2026-02-08 18:53:21,570 | INFO     | zombie collector waiting for pid 5729
[2026-02-08 13:53:52] 2026-02-08 18:53:21,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 13:53:52] 2026-02-08 18:53:21,570 | INFO     | collected zombie processes
[2026-02-08 13:53:52] 2026-02-08 18:53:21,570 | INFO     | will attempt to kill all subprocesses of pid=5729
[2026-02-08 13:53:52] 2026-02-08 18:53:21,664 | INFO     | process IDs to be killed: [5729] (in reverse order)
[2026-02-08 13:53:52] 2026-02-08 18:53:21,720 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 13:53:52] 2026-02-08 18:53:21,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 13:53:52] 2026-02-08 18:53:21,724 | INFO     | did not find any defunct processes belonging to 5729
[2026-02-08 13:53:52] 2026-02-08 18:53:21,727 | INFO     | did not find any defunct processes belonging to 5729
[2026-02-08 13:53:52] 2026-02-08 18:53:21,728 | INFO     | ready for new job
[2026-02-08 13:53:52] 2026-02-08 18:53:21,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 13:53:52] 2026-02-08 18:53:21,729 | INFO     | **************************************
[2026-02-08 13:53:52] 2026-02-08 18:53:21,729 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 13:53:52] 2026-02-08 18:53:21,729 | INFO     | **************************************
[2026-02-08 13:53:52] 2026-02-08 18:53:21,729 | INFO     | 
[2026-02-08 13:53:52] 2026-02-08 18:53:21,730 | INFO     | architecture information:
[2026-02-08 13:53:52] 2026-02-08 18:53:21,730 | INFO     | executing command: cat /etc/os-release
[2026-02-08 13:53:52] 2026-02-08 18:53:21,745 | INFO     | cat /etc/os-release:
[2026-02-08 13:53:52] NAME="CentOS Linux"
[2026-02-08 13:53:52] VERSION="7 (Core)"
[2026-02-08 13:53:52] ID="centos"
[2026-02-08 13:53:52] ID_LIKE="rhel fedora"
[2026-02-08 13:53:52] VERSION_ID="7"
[2026-02-08 13:53:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 13:53:52] ANSI_COLOR="0;31"
[2026-02-08 13:53:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 13:53:52] HOME_URL="https://www.centos.org/"
[2026-02-08 13:53:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 13:53:52] 
[2026-02-08 13:53:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 13:53:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 13:53:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 13:53:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 13:53:52] 
[2026-02-08 13:53:52] 2026-02-08 18:53:21,746 | INFO     | **************************************
[2026-02-08 13:53:52] 2026-02-08 18:53:22,249 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-08 13:53:52] 2026-02-08 18:53:22,274 | INFO     | sufficient remaining disk space (28801236992 B)
[2026-02-08 13:53:52] 2026-02-08 18:53:22,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 13:53:52] 2026-02-08 18:53:22,275 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 13:53:52] 2026-02-08 18:53:22,275 | INFO     | update_server=False
[2026-02-08 13:53:52] 2026-02-08 18:53:22,275 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 13:53:52] 2026-02-08 18:53:22,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 13:53:52] 2026-02-08 18:53:22,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 13:53:52] 2026-02-08 18:53:22,630 | INFO     | all payload control threads have been joined
[2026-02-08 13:53:52] 2026-02-08 18:53:22,739 | INFO     | all data control threads have been joined
[2026-02-08 13:53:52] 2026-02-08 18:53:22,881 | INFO     | all job control threads have been joined
[2026-02-08 13:53:52] 2026-02-08 18:53:23,235 | WARNING  | process 5729 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 13:53:52] 2026-02-08 18:53:23,280 | INFO     | [job] retrieve thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:23,281 | INFO     | [job] queue monitor thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:23,311 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 13:53:52] 2026-02-08 18:53:23,393 | INFO     | [data] copytool_in thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:23,401 | INFO     | number of running child processes to parent process 5729: 1
[2026-02-08 13:53:52] 2026-02-08 18:53:23,401 | INFO     | maximum number of monitored processes: 6
[2026-02-08 13:53:52] 2026-02-08 18:53:23,402 | INFO     | aborting job monitoring since job object (job id=7005045040) has expired
[2026-02-08 13:53:52] 2026-02-08 18:53:23,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 13:53:52] 2026-02-08 18:53:23,402 | INFO     | will abort loop
[2026-02-08 13:53:52] 2026-02-08 18:53:23,406 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:23,618 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:23,636 | INFO     | [payload] control thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:23,743 | INFO     | [data] control thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:23,886 | INFO     | [job] control thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:23,996 | INFO     | [payload] validate_post thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:24,281 | INFO     | [data] copytool_out thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:24,406 | INFO     | [job] job monitor thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:24,500 | INFO     | [payload] failed_post thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:24,540 | INFO     | [job] validate thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:24,562 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:25,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 13:53:52] 2026-02-08 18:53:29,122 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:29,141 | INFO     | [monitor] cgroup control has ended
[2026-02-08 13:53:52] 2026-02-08 18:53:32,589 | INFO     | job.realtimelogging is not enabled
[2026-02-08 13:53:52] 2026-02-08 18:53:33,590 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 13:53:52] 2026-02-08 18:53:33,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140563367245632)>', '<ExcThread(monitor, started 140562762016512)>']
[2026-02-08 13:53:52] 2026-02-08 18:53:38,755 | INFO     | all workflow threads have been joined
[2026-02-08 13:53:52] 2026-02-08 18:53:38,755 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 13:53:52] 2026-02-08 18:53:38,755 | INFO     | traces error code: 0
[2026-02-08 13:53:52] 2026-02-08 18:53:38,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 13:53:52] 2026-02-08 18:53:51,898 | INFO     | PID=1175 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-08 13:53:52] 2026-02-08 18:53:51,899 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 13:53:52] 2026-02-08 18:53:51,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 13:53:52] 2026-02-08 18:53:51,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 13:53:52] 2026-02-08 18:53:51,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 13:53:52] 2026-02-08 18:53:51,899 | INFO     | [monitor] control thread has ended
[2026-02-08 13:53:52] 2026-02-08 18:53:51,990 [wrapper] ==== pilot stdout END ====
[2026-02-08 13:53:52] 2026-02-08 18:53:51,994 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 13:53:52] 2026-02-08 18:53:51,997 [wrapper] pilotpid: 1175
[2026-02-08 13:53:52] 2026-02-08 18:53:52,001 [wrapper] Pilot exit status: 0
[2026-02-08 13:53:52] 2026-02-08 18:53:52,016 [wrapper] pandaids: 7005045040
[2026-02-08 13:53:52] 2026-02-08 18:53:52,058 [wrapper] cleanup supervisor_pilot 24023 1176
[2026-02-08 13:53:52] 2026-02-08 18:53:52,063 [wrapper] Test setup, not cleaning
[2026-02-08 13:53:52] 2026-02-08 18:53:52,066 [wrapper] apfmon messages muted
[2026-02-08 13:53:52] 2026-02-08 18:53:52,070 [wrapper] ==== wrapper stdout END ====
[2026-02-08 13:53:52] 2026-02-08 18:53:52,074 [wrapper] ==== wrapper stderr END ====
[2026-02-08 13:53:52]  *** Error codes and diagnostics ***
[2026-02-08 13:53:52]     "exeErrorCode": 0,
[2026-02-08 13:53:52]     "exeErrorDiag": "",
[2026-02-08 13:53:52]     "pilotErrorCode": 0,
[2026-02-08 13:53:52]     "pilotErrorDiag": "",
[2026-02-08 13:53:52]  *** Listing of results directory ***
[2026-02-08 13:53:52] total 664404
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas    584627 Feb  8 06:49 pilot3.tar.gz
[2026-02-08 13:53:52] -rwx------ 1 boincer umatlas     36322 Feb  8 06:50 runpilot2-wrapper.sh
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas      5111 Feb  8 06:50 queuedata.json
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas       100 Feb  8 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 13:53:52] -rwxr-xr-x 1 boincer umatlas      7986 Feb  8 12:48 run_atlas
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas       105 Feb  8 12:48 job.xml
[2026-02-08 13:53:52] -rw-r--r-- 2 boincer umatlas 498174365 Feb  8 12:49 EVNT.48310747._000153.pool.root.1
[2026-02-08 13:53:52] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 12:49 start_atlas.sh
[2026-02-08 13:53:52] drwxrwx--x 2 boincer umatlas      4096 Feb  8 12:49 shared
[2026-02-08 13:53:52] -rw-r--r-- 2 boincer umatlas    597946 Feb  8 12:49 input.tar.gz
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas         0 Feb  8 12:49 boinc_lockfile
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas      2523 Feb  8 12:49 pandaJob.out
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas        57 Feb  8 12:49 setup.sh.local
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas   1009504 Feb  8 12:49 agis_schedconf.cvmfs.json
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas   1513088 Feb  8 12:49 agis_ddmendpoints.agis.ALL.json
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas       432 Feb  8 12:49 workernode_map.json
[2026-02-08 13:53:52] drwx------ 5 boincer umatlas      4096 Feb  8 12:49 pilot3
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas      5952 Feb  8 13:45 init_data.xml
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas 176269048 Feb  8 13:52 HITS.48310749._008167.pool.root.1
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas       530 Feb  8 13:53 boinc_task_state.xml
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas        95 Feb  8 13:53 pilot_heartbeat.json
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas      1043 Feb  8 13:53 memory_monitor_summary.json
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas    415662 Feb  8 13:53 log.48310749._008167.job.log.tgz.1
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas      6402 Feb  8 13:53 heartbeat.json
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas      8192 Feb  8 13:53 boinc_mmap_file
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas        27 Feb  8 13:53 wrapper_checkpoint.txt
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas       744 Feb  8 13:53 pilotlog.txt
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas    566099 Feb  8 13:53 log.48310749._008167.job.log.1
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas       357 Feb  8 13:53 output.list
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas       620 Feb  8 13:53 runtime_log
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas   1003520 Feb  8 13:53 result.tar.gz
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas      9338 Feb  8 13:53 runtime_log.err
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas       658 Feb  8 13:53 dh3NDmtTI98n9Rq4apOajLDm4fhM0noT9bVooX4SDmJ3cKDmXH3Ngn.diag
[2026-02-08 13:53:52] -rw-r--r-- 1 boincer umatlas     21445 Feb  8 13:53 stderr.txt
[2026-02-08 13:53:52] HITS file was successfully produced:
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas 176269048 Feb  8 13:52 shared/HITS.pool.root.1
[2026-02-08 13:53:52]  *** Contents of shared directory: ***
[2026-02-08 13:53:52] total 660224
[2026-02-08 13:53:52] -rw-r--r-- 2 boincer umatlas 498174365 Feb  8 12:49 ATLAS.root_0
[2026-02-08 13:53:52] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 12:49 start_atlas.sh
[2026-02-08 13:53:52] -rw-r--r-- 2 boincer umatlas    597946 Feb  8 12:49 input.tar.gz
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas 176269048 Feb  8 13:52 HITS.pool.root.1
[2026-02-08 13:53:52] -rw------- 1 boincer umatlas   1003520 Feb  8 13:53 result.tar.gz
13:53:53 (29600): run_atlas exited; CPU time 41240.604525
13:53:53 (29600): called boinc_finish(0)

</stderr_txt>
]]>

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