Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:02:21 (623377): wrapper (7.7.26015): starting
13:02:21 (623377): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 13:02:21] Arguments: --nthreads 12
[2026-02-08 13:02:21] Threads: 12
[2026-02-08 13:02:21] Checking for CVMFS
[2026-02-08 13:02:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 13:02:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 13:02:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 13:02:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 13:02:23] 2.13.3.0 509655 58 47132 156028 1 188 2738931 4096001 922 130560 0 148209 99.988 4289 972 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-08 13:02:23] CVMFS is ok
[2026-02-08 13:02:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 13:02:23] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-08 13:02:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-08 13:02:23] Further information can be found at the LHC@home message board.
[2026-02-08 13:02:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 13:02:23] Checking for apptainer binary...
[2026-02-08 13:02:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 13:02:23] Running /usr/bin/apptainer --version
[2026-02-08 13:02:23] apptainer version 1.4.5
[2026-02-08 13:02:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 13:02:23] zhiwei-Z790-Riptide-WiFi
[2026-02-08 13:02:23] apptainer works
[2026-02-08 13:02:23] Set ATHENA_PROC_NUMBER=12
[2026-02-08 13:02:23] Set ATHENA_CORE_NUMBER=12
[2026-02-08 13:02:23] Starting ATLAS job with PandaID=7004653655
[2026-02-08 13:02:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:08:14 (2879): wrapper (7.7.26015): starting
13:08:14 (2879): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 13:08:14] Arguments: --nthreads 12
[2026-02-08 13:08:14] Threads: 12
[2026-02-08 13:08:14] This job has been restarted, cleaning up previous attempt
[2026-02-08 13:08:14] Checking for CVMFS
[2026-02-08 13:08:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 13:08:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 13:08:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 13:08:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 13:08:18] 2.13.3.0 3172 0 25740 156028 3 1 2738949 4096001 0 130560 0 0 100.000 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-08 13:08:18] CVMFS is ok
[2026-02-08 13:08:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 13:08:18] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-08 13:08:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-08 13:08:18] Further information can be found at the LHC@home message board.
[2026-02-08 13:08:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 13:08:18] Checking for apptainer binary...
[2026-02-08 13:08:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 13:08:18] Running /usr/bin/apptainer --version
[2026-02-08 13:08:18] apptainer version 1.4.5
[2026-02-08 13:08:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 13:08:18] zhiwei-Z790-Riptide-WiFi
[2026-02-08 13:08:18] apptainer works
[2026-02-08 13:08:18] Set ATHENA_PROC_NUMBER=12
[2026-02-08 13:08:18] Set ATHENA_CORE_NUMBER=12
[2026-02-08 13:08:18] Starting ATLAS job with PandaID=7004653655
[2026-02-08 13:08:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 13:36:39]  *** The last 200 lines of the pilot log: ***
[2026-02-08 13:36:39]  filetype=log
[2026-02-08 13:36:39]  guid=514b81c0-66c9-4486-a2bd-495fd28afac0
[2026-02-08 13:36:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 13:36:39]  is_altstaged=None
[2026-02-08 13:36:39]  is_tar=False
[2026-02-08 13:36:39]  lfn=log.48318034._012323.job.log.tgz.1
[2026-02-08 13:36:39]  mtime=0
[2026-02-08 13:36:39]  protocol_id=None
[2026-02-08 13:36:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 13:36:39]  replicas=None
[2026-02-08 13:36:39]  scope=mc23_13p6TeV
[2026-02-08 13:36:39]  status=None
[2026-02-08 13:36:39]  status_code=0
[2026-02-08 13:36:39]  storage_token=
[2026-02-08 13:36:39]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-7004653655/log.48318034._012323.job.log.tgz.1
[2026-02-08 13:36:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/11/log.48318034._012323.job.log.tgz.1
[2026-02-08 13:36:39]  workdir=None
[2026-02-08 13:36:39] ]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,690 | INFO     | transferring file log.48318034._012323.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-7004653655/log.48318034._012323.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-08 13:36:39] 2026-02-08 18:36:18,690 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-7004653655/log.48318034._012323.job.log.tgz.1 /var/lib/boinc/slots/1/log.48318034._012323.job
[2026-02-08 13:36:39] 2026-02-08 18:36:18,699 | INFO     | adding to output.list: log.48318034._012323.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/11/log.48318034._012323.job.log.tg
[2026-02-08 13:36:39] 2026-02-08 18:36:18,699 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 13:36:39] 2026-02-08 18:36:18,700 | INFO     | summary of transferred files:
[2026-02-08 13:36:39] 2026-02-08 18:36:18,700 | INFO     |  -- lfn=log.48318034._012323.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 13:36:39] 2026-02-08 18:36:18,700 | INFO     | stage-out finished correctly
[2026-02-08 13:36:39] 2026-02-08 18:36:18,717 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 13:36:39] 2026-02-08 18:36:18,736 | INFO     | job 7004653655 has state=finished
[2026-02-08 13:36:39] 2026-02-08 18:36:18,736 | INFO     | preparing for final server update for job 7004653655 in state='finished'
[2026-02-08 13:36:39] 2026-02-08 18:36:18,736 | INFO     | reading metadata from: /var/lib/boinc/slots/1/PanDA_Pilot-7004653655/jobReport.json
[2026-02-08 13:36:39] 2026-02-08 18:36:18,737 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/1/workernode_map.json
[2026-02-08 13:36:39] 2026-02-08 18:36:18,737 | INFO     | this job has now completed (state=finished)
[2026-02-08 13:36:39] 2026-02-08 18:36:18,737 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 13:36:39] 2026-02-08 18:36:18,737 | INFO     | log transfer has been attempted: DONE
[2026-02-08 13:36:39] 2026-02-08 18:36:18,737 | INFO     | job 7004653655 has finished - writing final server update
[2026-02-08 13:36:39] 2026-02-08 18:36:18,737 | INFO     | total number of processed events: 400 (read)
[2026-02-08 13:36:39] 2026-02-08 18:36:18,739 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-7004653655/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 13:36:39] 2026-02-08 18:36:18,739 | INFO     | extracted standard info from prmon json
[2026-02-08 13:36:39] 2026-02-08 18:36:18,739 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 13:36:39] 2026-02-08 18:36:18,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 13:36:39] 2026-02-08 18:36:18,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 13:36:39] 2026-02-08 18:36:18,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | fitting pss+swap vs Time
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | sum of square deviations: 2865170.0
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | sum of deviations: -548240184.0
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | mean x: 1770575035.0
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | mean y: 2751604.904761905
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | intersect: 338796045885.59546
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | chi2: 0.008576504490311096
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | current memory leak: -191.35 B/s (using 21 data points, chi2=0.01)
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | could have reported an average CPU frequency of 4085 MHz (4 samples)
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | ..............................
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | . Timing measurements:
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | . get job = 0 s
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | . initial setup = 0 s
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | . payload setup = 1 s
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | . stage-in = 0 s
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | . payload execution = 1656 s
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | . stage-out = 0 s
[2026-02-08 13:36:39] 2026-02-08 18:36:18,740 | INFO     | . log creation = 0 s
[2026-02-08 13:36:39] 2026-02-08 18:36:18,741 | INFO     | ..............................
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | 
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | job summary report
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | --------------------------------------------------
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | PanDA job id: 7004653655
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | task id: 48318034
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | errors: (none)
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | pilot state: finished 
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | transexitcode: 0
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | exeerrorcode: 0
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | exeerrordiag: 
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | exitcode: 0
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | exitmsg: OK
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | cpuconsumptiontime: 18644 s
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | nevents: 400
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | neventsw: 0
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | pid: 16132
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | pgrp: 16132
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | corecount: 12
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | event service: False
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | sizes: {0: 2283003, 11: 2283003, 1662: 2317001}
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | --------------------------------------------------
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | 
[2026-02-08 13:36:39] 2026-02-08 18:36:18,762 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 13:36:39] 2026-02-08 18:36:18,773 | INFO     | job 7004653655 has completed (purged errors)
[2026-02-08 13:36:39] 2026-02-08 18:36:18,774 | INFO     | overall cleanup function is called
[2026-02-08 13:36:39] 2026-02-08 18:36:19,780 | INFO     | --- collectZombieJob: --- 10, [16132]
[2026-02-08 13:36:39] 2026-02-08 18:36:19,780 | INFO     | zombie collector waiting for pid 16132
[2026-02-08 13:36:39] 2026-02-08 18:36:19,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 13:36:39] 2026-02-08 18:36:19,780 | INFO     | collected zombie processes
[2026-02-08 13:36:39] 2026-02-08 18:36:19,780 | INFO     | will attempt to kill all subprocesses of pid=16132
[2026-02-08 13:36:39] 2026-02-08 18:36:19,810 | INFO     | process IDs to be killed: [16132] (in reverse order)
[2026-02-08 13:36:39] 2026-02-08 18:36:19,830 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 13:36:39] 2026-02-08 18:36:19,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 13:36:39] 2026-02-08 18:36:19,832 | INFO     | did not find any defunct processes belonging to 16132
[2026-02-08 13:36:39] 2026-02-08 18:36:19,834 | INFO     | did not find any defunct processes belonging to 16132
[2026-02-08 13:36:39] 2026-02-08 18:36:19,834 | INFO     | ready for new job
[2026-02-08 13:36:39] 2026-02-08 18:36:19,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 13:36:39] 2026-02-08 18:36:19,835 | INFO     | **************************************
[2026-02-08 13:36:39] 2026-02-08 18:36:19,835 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 13:36:39] 2026-02-08 18:36:19,835 | INFO     | **************************************
[2026-02-08 13:36:39] 2026-02-08 18:36:19,835 | INFO     | 
[2026-02-08 13:36:39] 2026-02-08 18:36:19,835 | INFO     | architecture information:
[2026-02-08 13:36:39] 2026-02-08 18:36:19,836 | INFO     | executing command: cat /etc/os-release
[2026-02-08 13:36:39] 2026-02-08 18:36:19,842 | INFO     | cat /etc/os-release:
[2026-02-08 13:36:39] NAME="CentOS Linux"
[2026-02-08 13:36:39] VERSION="7 (Core)"
[2026-02-08 13:36:39] ID="centos"
[2026-02-08 13:36:39] ID_LIKE="rhel fedora"
[2026-02-08 13:36:39] VERSION_ID="7"
[2026-02-08 13:36:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 13:36:39] ANSI_COLOR="0;31"
[2026-02-08 13:36:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 13:36:39] HOME_URL="https://www.centos.org/"
[2026-02-08 13:36:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 13:36:39] 
[2026-02-08 13:36:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 13:36:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 13:36:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 13:36:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 13:36:39] 
[2026-02-08 13:36:39] 2026-02-08 18:36:19,842 | INFO     | **************************************
[2026-02-08 13:36:39] 2026-02-08 18:36:20,345 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-02-08 13:36:39] 2026-02-08 18:36:20,354 | INFO     | sufficient remaining disk space (1803329470464 B)
[2026-02-08 13:36:39] 2026-02-08 18:36:20,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 13:36:39] 2026-02-08 18:36:20,354 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 13:36:39] 2026-02-08 18:36:20,354 | INFO     | update_server=False
[2026-02-08 13:36:39] 2026-02-08 18:36:20,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 13:36:39] 2026-02-08 18:36:20,354 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-08 13:36:39] 2026-02-08 18:36:20,354 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 13:36:39] 2026-02-08 18:36:20,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 13:36:39] 2026-02-08 18:36:20,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 13:36:39] 2026-02-08 18:36:20,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 13:36:39] 2026-02-08 18:36:20,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 13:36:39] 2026-02-08 18:36:20,478 | INFO     | all payload control threads have been joined
[2026-02-08 13:36:39] 2026-02-08 18:36:20,780 | INFO     | all job control threads have been joined
[2026-02-08 13:36:39] 2026-02-08 18:36:21,281 | INFO     | all data control threads have been joined
[2026-02-08 13:36:39] 2026-02-08 18:36:21,359 | INFO     | [job] retrieve thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:21,360 | INFO     | [job] queue monitor thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:21,480 | INFO     | [payload] control thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:21,492 | INFO     | [payload] failed_post thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:21,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 13:36:39] 2026-02-08 18:36:21,786 | INFO     | [job] control thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:21,794 | INFO     | [job] validate thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:21,836 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:21,906 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:21,986 | INFO     | [data] copytool_in thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:22,287 | INFO     | [data] control thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:22,474 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:22,696 | INFO     | [payload] validate_post thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:23,456 | WARNING  | process 16132 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 13:36:39] 2026-02-08 18:36:23,473 | INFO     | using path: /var/lib/boinc/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 13:36:39] 2026-02-08 18:36:23,493 | INFO     | number of running child processes to parent process 16132: 1
[2026-02-08 13:36:39] 2026-02-08 18:36:23,493 | INFO     | maximum number of monitored processes: 6
[2026-02-08 13:36:39] 2026-02-08 18:36:23,493 | INFO     | aborting job monitoring since job object (job id=7004653655) has expired
[2026-02-08 13:36:39] 2026-02-08 18:36:23,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 13:36:39] 2026-02-08 18:36:23,493 | INFO     | will abort loop
[2026-02-08 13:36:39] 2026-02-08 18:36:23,727 | INFO     | [data] copytool_out thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:24,360 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:24,499 | INFO     | [job] job monitor thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:28,013 | INFO     | [monitor] cgroup control has ended
[2026-02-08 13:36:39] 2026-02-08 18:36:31,113 | INFO     | job.realtimelogging is not enabled
[2026-02-08 13:36:39] 2026-02-08 18:36:32,119 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 13:36:39] 2026-02-08 18:36:34,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125444488992576)>', '<ExcThread(monitor, started 125444149982976)>']
[2026-02-08 13:36:39] 2026-02-08 18:36:34,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 13:36:39] 2026-02-08 18:36:34,426 | INFO     | [monitor] control thread has ended
[2026-02-08 13:36:39] 2026-02-08 18:36:39,224 | INFO     | all workflow threads have been joined
[2026-02-08 13:36:39] 2026-02-08 18:36:39,225 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 13:36:39] 2026-02-08 18:36:39,225 | INFO     | traces error code: 0
[2026-02-08 13:36:39] 2026-02-08 18:36:39,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 13:36:39] 2026-02-08 18:36:39,259 [wrapper] ==== pilot stdout END ====
[2026-02-08 13:36:39] 2026-02-08 18:36:39,260 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 13:36:39] 2026-02-08 18:36:39,262 [wrapper] pilotpid: 11173
[2026-02-08 13:36:39] 2026-02-08 18:36:39,263 [wrapper] Pilot exit status: 0
[2026-02-08 13:36:39] 2026-02-08 18:36:39,267 [wrapper] pandaids: 7004653655 7004653655
[2026-02-08 13:36:39] 2026-02-08 18:36:39,280 [wrapper] cleanup supervisor_pilot   25382 11174
[2026-02-08 13:36:39] 2026-02-08 18:36:39,282 [wrapper] Test setup, not cleaning
[2026-02-08 13:36:39] 2026-02-08 18:36:39,283 [wrapper] apfmon messages muted
[2026-02-08 13:36:39] 2026-02-08 18:36:39,284 [wrapper] ==== wrapper stdout END ====
[2026-02-08 13:36:39] 2026-02-08 18:36:39,285 [wrapper] ==== wrapper stderr END ====
[2026-02-08 13:36:39]  *** Error codes and diagnostics ***
[2026-02-08 13:36:39]     "exeErrorCode": 0,
[2026-02-08 13:36:39]     "exeErrorDiag": "",
[2026-02-08 13:36:39]     "pilotErrorCode": 0,
[2026-02-08 13:36:39]     "pilotErrorDiag": "",
[2026-02-08 13:36:39]  *** Listing of results directory ***
[2026-02-08 13:36:39] total 1150460
[2026-02-08 13:36:39] drwx------ 5 boinc boinc      4096 Feb  2 10:00 pilot3
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc    584627 Feb  8 06:49 pilot3.tar.gz
[2026-02-08 13:36:39] -rwx------ 1 boinc boinc     36322 Feb  8 06:50 runpilot2-wrapper.sh
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc      5111 Feb  8 06:51 queuedata.json
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc       100 Feb  8 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 13:36:39] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 13:02 run_atlas
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc       105 Feb  8 13:02 job.xml
[2026-02-08 13:36:39] -rw-r--r-- 3 boinc boinc 496825614 Feb  8 13:02 EVNT.48318032._000172.pool.root.1
[2026-02-08 13:36:39] -rw-r--r-- 3 boinc boinc 496825614 Feb  8 13:02 ATLAS.root_0
[2026-02-08 13:36:39] -rw-r--r-- 2 boinc boinc    597969 Feb  8 13:02 input.tar.gz
[2026-02-08 13:36:39] -rw-r--r-- 2 boinc boinc     15845 Feb  8 13:02 start_atlas.sh
[2026-02-08 13:36:39] drwxrwx--x 2 boinc boinc      4096 Feb  8 13:02 shared
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc         0 Feb  8 13:02 boinc_setup_complete
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc         0 Feb  8 13:02 boinc_lockfile
[2026-02-08 13:36:39] -rw------- 1 boinc boinc   1513088 Feb  8 13:02 agis_ddmendpoints.agis.ALL.json
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc      8829 Feb  8 13:08 init_data.xml
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc      2537 Feb  8 13:08 pandaJob.out
[2026-02-08 13:36:39] -rw------- 1 boinc boinc   1009504 Feb  8 13:08 agis_schedconf.cvmfs.json
[2026-02-08 13:36:39] -rw------- 1 boinc boinc       425 Feb  8 13:08 workernode_map.json
[2026-02-08 13:36:39] -rw------- 1 boinc boinc        96 Feb  8 13:35 pilot_heartbeat.json
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc       530 Feb  8 13:36 boinc_task_state.xml
[2026-02-08 13:36:39] -rw------- 1 boinc boinc 179148621 Feb  8 13:36 HITS.48318034._012323.pool.root.1
[2026-02-08 13:36:39] -rw------- 1 boinc boinc      1031 Feb  8 13:36 memory_monitor_summary.json
[2026-02-08 13:36:39] -rw------- 1 boinc boinc    373161 Feb  8 13:36 log.48318034._012323.job.log.tgz.1
[2026-02-08 13:36:39] -rw------- 1 boinc boinc      6353 Feb  8 13:36 heartbeat.json
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc        27 Feb  8 13:36 wrapper_checkpoint.txt
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc      8192 Feb  8 13:36 boinc_mmap_file
[2026-02-08 13:36:39] -rw------- 1 boinc boinc      5139 Feb  8 13:36 pilotlog.txt
[2026-02-08 13:36:39] -rw------- 1 boinc boinc    282837 Feb  8 13:36 log.48318034._012323.job.log.1
[2026-02-08 13:36:39] -rw------- 1 boinc boinc       357 Feb  8 13:36 output.list
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc       620 Feb  8 13:36 runtime_log
[2026-02-08 13:36:39] -rw------- 1 boinc boinc    675840 Feb  8 13:36 result.tar.gz
[2026-02-08 13:36:39] -rw------- 1 boinc boinc       787 Feb  8 13:36 wRWLDmGUI98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKbdKDmBDJ2xn.diag
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc      8939 Feb  8 13:36 runtime_log.err
[2026-02-08 13:36:39] -rw-r--r-- 1 boinc boinc     23418 Feb  8 13:36 stderr.txt
[2026-02-08 13:36:39] HITS file was successfully produced:
[2026-02-08 13:36:39] -rw------- 1 boinc boinc 179148621 Feb  8 13:36 shared/HITS.pool.root.1
[2026-02-08 13:36:39]  *** Contents of shared directory: ***
[2026-02-08 13:36:39] total 661404
[2026-02-08 13:36:39] -rw-r--r-- 3 boinc boinc 496825614 Feb  8 13:02 ATLAS.root_0
[2026-02-08 13:36:39] -rw-r--r-- 2 boinc boinc    597969 Feb  8 13:02 input.tar.gz
[2026-02-08 13:36:39] -rw-r--r-- 2 boinc boinc     15845 Feb  8 13:02 start_atlas.sh
[2026-02-08 13:36:39] -rw------- 1 boinc boinc 179148621 Feb  8 13:36 HITS.pool.root.1
[2026-02-08 13:36:39] -rw------- 1 boinc boinc    675840 Feb  8 13:36 result.tar.gz
13:36:40 (2879): run_atlas exited; CPU time 18649.295910
13:36:40 (2879): called boinc_finish(0)

</stderr_txt>
]]>

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