Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:26:21 (2313721): wrapper (7.7.26015): starting
06:26:21 (2313721): wrapper: running run_atlas (--nthreads 3)
[2026-02-09 06:26:21] Arguments: --nthreads 3
[2026-02-09 06:26:21] Threads: 3
[2026-02-09 06:26:21] Checking for CVMFS
[2026-02-09 06:26:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 06:26:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 06:26:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 06:26:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 06:26:22] 2.9.2.0 1622115 4197 79568 156045 3 49 26286601 36864000 0 130560 0 1804914 99.984 152353 17151 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 06:26:22] CVMFS is ok
[2026-02-09 06:26:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 06:26:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 06:26:22] Further information can be found at the LHC@home message board.
[2026-02-09 06:26:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 06:26:22] Checking for apptainer binary...
[2026-02-09 06:26:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 06:26:22] Running /usr/bin/apptainer --version
[2026-02-09 06:26:22] apptainer version 1.4.1-1.1
[2026-02-09 06:26:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 06:26:22] magicA246a
[2026-02-09 06:26:22] apptainer works
[2026-02-09 06:26:22] Set ATHENA_PROC_NUMBER=3
[2026-02-09 06:26:22] Set ATHENA_CORE_NUMBER=3
[2026-02-09 06:26:22] Starting ATLAS job with PandaID=6993056661
[2026-02-09 06:26:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 07:40:43]  *** The last 200 lines of the pilot log: ***
[2026-02-09 07:40:43] 2026-02-09 06:39:54,411 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-09 07:40:43] 2026-02-09 06:39:54,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 07:40:43] 2026-02-09 06:39:54,412 | INFO     | will abort loop
[2026-02-09 07:40:43] 2026-02-09 06:39:54,771 | INFO     | all data control threads have been joined
[2026-02-09 07:40:43] 2026-02-09 06:39:55,063 | INFO     | [job] queue monitor thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:55,066 | INFO     | [job] retrieve thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:55,077 | INFO     | all job control threads have been joined
[2026-02-09 07:40:43] 2026-02-09 06:39:55,127 | INFO     | [payload] control thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:55,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 07:40:43] 2026-02-09 06:39:55,417 | INFO     | [job] job monitor thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:55,532 | INFO     | [payload] validate_post thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:55,776 | INFO     | [data] control thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:56,031 | INFO     | [job] validate thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:56,067 | INFO     | [data] copytool_out thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:56,067 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:56,083 | INFO     | [job] control thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:56,103 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:56,226 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:56,252 | INFO     | [data] copytool_in thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:56,624 | INFO     | [payload] failed_post thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:39:59,417 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:40:04,639 | INFO     | job.realtimelogging is not enabled
[2026-02-09 07:40:43] 2026-02-09 06:40:05,644 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 07:40:43] 2026-02-09 06:40:37,396 | INFO     | [monitor] cgroup control has ended
[2026-02-09 07:40:43] 2026-02-09 06:40:38,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140561383892800)>', '<ExcThread(monitor, started 140560899753728)>']
[2026-02-09 07:40:43] 2026-02-09 06:40:39,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 07:40:43] 2026-02-09 06:40:39,271 | INFO     | [monitor] control thread has ended
[2026-02-09 07:40:43] 2026-02-09 06:40:43,290 | INFO     | all workflow threads have been joined
[2026-02-09 07:40:43] 2026-02-09 06:40:43,290 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 07:40:43] 2026-02-09 06:40:43,291 | INFO     | traces error code: 0
[2026-02-09 07:40:43] 2026-02-09 06:40:43,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 07:40:43] 2026-02-09 06:40:43,345 [wrapper] ==== pilot stdout END ====
[2026-02-09 07:40:43] 2026-02-09 06:40:43,347 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 07:40:43] 2026-02-09 06:40:43,350 [wrapper] pilotpid: 2317777
[2026-02-09 07:40:43] 2026-02-09 06:40:43,352 [wrapper] Pilot exit status: 0
[2026-02-09 07:40:43] 2026-02-09 06:40:43,359 [wrapper] pandaids: 6993056661
[2026-02-09 07:40:43] 2026-02-09 06:40:43,379 [wrapper] cleanup supervisor_pilot 2328312 2317778
[2026-02-09 07:40:43] 2026-02-09 06:40:43,381 [wrapper] Test setup, not cleaning
[2026-02-09 07:40:43] 2026-02-09 06:40:43,384 [wrapper] apfmon messages muted
[2026-02-09 07:40:43] 2026-02-09 06:40:43,386 [wrapper] ==== wrapper stdout END ====
[2026-02-09 07:40:43] 2026-02-09 06:40:43,388 [wrapper] ==== wrapper stderr END ====
[2026-02-09 07:40:43]  *** Error codes and diagnostics ***
[2026-02-09 07:40:43]     "exeErrorCode": 0,
[2026-02-09 07:40:43]     "exeErrorDiag": "",
[2026-02-09 07:40:43]     "pilotErrorCode": 0,
[2026-02-09 07:40:43]     "pilotErrorDiag": "",
[2026-02-09 07:40:43]  *** Listing of results directory ***
[2026-02-09 07:40:43] total 665968
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc    584627 Feb  8 11:56 pilot3.tar.gz
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc      5111 Feb  8 11:58 queuedata.json
[2026-02-09 07:40:43] -rwx------ 1 boinc boinc     36322 Feb  8 11:59 runpilot2-wrapper.sh
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc       100 Feb  9 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 07:40:43] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 06:26 run_atlas
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc       105 Feb  9 06:26 job.xml
[2026-02-09 07:40:43] -rw-r--r-- 2 boinc boinc 493477055 Feb  9 06:26 EVNT.48310585._000101.pool.root.1
[2026-02-09 07:40:43] -rw-r--r-- 2 boinc boinc    597954 Feb  9 06:26 input.tar.gz
[2026-02-09 07:40:43] -rw-r--r-- 2 boinc boinc     15845 Feb  9 06:26 start_atlas.sh
[2026-02-09 07:40:43] drwxrwx--x 2 boinc boinc      4096 Feb  9 06:26 shared
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc         0 Feb  9 06:26 boinc_setup_complete
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc      6447 Feb  9 06:26 init_data.xml
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc         0 Feb  9 06:26 boinc_lockfile
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc      2528 Feb  9 06:26 pandaJob.out
[2026-02-09 07:40:43] -rw------- 1 boinc boinc   1009512 Feb  9 06:26 agis_schedconf.cvmfs.json
[2026-02-09 07:40:43] -rw------- 1 boinc boinc   1513088 Feb  9 06:26 agis_ddmendpoints.agis.ALL.json
[2026-02-09 07:40:43] -rw------- 1 boinc boinc       428 Feb  9 06:26 workernode_map.json
[2026-02-09 07:40:43] drwx------ 5 boinc boinc      4096 Feb  9 06:26 pilot3
[2026-02-09 07:40:43] -rw------- 1 boinc boinc        95 Feb  9 07:38 pilot_heartbeat.json
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc       530 Feb  9 07:39 boinc_task_state.xml
[2026-02-09 07:40:43] -rw------- 1 boinc boinc 182719496 Feb  9 07:39 HITS.48310589._005165.pool.root.1
[2026-02-09 07:40:43] -rw------- 1 boinc boinc      1016 Feb  9 07:39 memory_monitor_summary.json
[2026-02-09 07:40:43] -rw------- 1 boinc boinc    263335 Feb  9 07:39 log.48310589._005165.job.log.tgz.1
[2026-02-09 07:40:43] -rw------- 1 boinc boinc      6309 Feb  9 07:39 heartbeat.json
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc      8192 Feb  9 07:40 boinc_mmap_file
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc        27 Feb  9 07:40 wrapper_checkpoint.txt
[2026-02-09 07:40:43] -rw------- 1 boinc boinc      4810 Feb  9 07:40 pilotlog.txt
[2026-02-09 07:40:43] -rw------- 1 boinc boinc    650628 Feb  9 07:40 log.48310589._005165.job.log.1
[2026-02-09 07:40:43] -rw------- 1 boinc boinc       357 Feb  9 07:40 output.list
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc       620 Feb  9 07:40 runtime_log
[2026-02-09 07:40:43] -rw------- 1 boinc boinc    931840 Feb  9 07:40 result.tar.gz
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc      8916 Feb  9 07:40 runtime_log.err
[2026-02-09 07:40:43] -rw------- 1 boinc boinc       661 Feb  9 07:40 aXEMDmwgH98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEWdKDmhhYU8n.diag
[2026-02-09 07:40:43] -rw-r--r-- 1 boinc boinc      6485 Feb  9 07:40 stderr.txt
[2026-02-09 07:40:43] HITS file was successfully produced:
[2026-02-09 07:40:43] -rw------- 1 boinc boinc 182719496 Feb  9 07:39 shared/HITS.pool.root.1
[2026-02-09 07:40:43]  *** Contents of shared directory: ***
[2026-02-09 07:40:43] total 661872
[2026-02-09 07:40:43] -rw-r--r-- 2 boinc boinc 493477055 Feb  9 06:26 ATLAS.root_0
[2026-02-09 07:40:43] -rw-r--r-- 2 boinc boinc    597954 Feb  9 06:26 input.tar.gz
[2026-02-09 07:40:43] -rw-r--r-- 2 boinc boinc     15845 Feb  9 06:26 start_atlas.sh
[2026-02-09 07:40:43] -rw------- 1 boinc boinc 182719496 Feb  9 07:39 HITS.pool.root.1
[2026-02-09 07:40:43] -rw------- 1 boinc boinc    931840 Feb  9 07:40 result.tar.gz
07:40:44 (2313721): run_atlas exited; CPU time 12606.091005
07:40:44 (2313721): called boinc_finish(0)

</stderr_txt>
]]>

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