Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:55:01 (23011): wrapper (7.7.26015): starting
09:55:01 (23011): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 09:55:01] Arguments: --nthreads 8
[2026-02-08 09:55:01] Threads: 8
[2026-02-08 09:55:01] Checking for CVMFS
[2026-02-08 09:55:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 09:55:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 09:55:01] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 09:55:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 09:55:02] 2.11.2.0 2857 174343 133216 156022 3 50 17353785 20275200 1 130560 0 47281919 99.828 12737229 29009 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-08 09:55:02] CVMFS is ok
[2026-02-08 09:55:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 09:55:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 09:55:02] Further information can be found at the LHC@home message board.
[2026-02-08 09:55:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 09:55:02] Checking for apptainer binary...
[2026-02-08 09:55:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 09:55:02] Running /usr/bin/apptainer --version
[2026-02-08 09:55:02] apptainer version 1.3.2-1.el7
[2026-02-08 09:55:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 09:55:03] c-204-10.aglt2.org
[2026-02-08 09:55:03] apptainer works
[2026-02-08 09:55:03] Set ATHENA_PROC_NUMBER=8
[2026-02-08 09:55:03] Set ATHENA_CORE_NUMBER=8
[2026-02-08 09:55:03] Starting ATLAS job with PandaID=7004480526
[2026-02-08 09:55:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:29:36 (4945): wrapper (7.7.26015): starting
11:29:36 (4945): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 11:29:36] Arguments: --nthreads 8
[2026-02-08 11:29:36] Threads: 8
[2026-02-08 11:29:36] This job has been restarted, cleaning up previous attempt
[2026-02-08 11:29:36] Checking for CVMFS
[2026-02-08 11:29:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 11:29:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 11:29:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 11:29:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 11:29:37] 2.11.2.0 2857 174437 133208 156026 1 9 17522733 20275201 1 130560 0 47333511 99.828 12746277 29014 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-08 11:29:37] CVMFS is ok
[2026-02-08 11:29:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 11:29:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 11:29:37] Further information can be found at the LHC@home message board.
[2026-02-08 11:29:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 11:29:37] Checking for apptainer binary...
[2026-02-08 11:29:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 11:29:37] Running /usr/bin/apptainer --version
[2026-02-08 11:29:37] apptainer version 1.3.2-1.el7
[2026-02-08 11:29:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 11:29:39] c-204-10.aglt2.org
[2026-02-08 11:29:39] apptainer works
[2026-02-08 11:29:39] Set ATHENA_PROC_NUMBER=8
[2026-02-08 11:29:39] Set ATHENA_CORE_NUMBER=8
[2026-02-08 11:29:39] Starting ATLAS job with PandaID=7004480526
[2026-02-08 11:29:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 13:34:15]  *** The last 200 lines of the pilot log: ***
[2026-02-08 13:34:15] 2026-02-08 18:33:31,611 | INFO     | maximum number of monitored processes: 6
[2026-02-08 13:34:15] 2026-02-08 18:33:32,039 | INFO     | time since job start (7415s) is within the limit (349056.0s)
[2026-02-08 13:34:15] 2026-02-08 18:33:32,944 | INFO     | job 7004480526 has state=finished
[2026-02-08 13:34:15] 2026-02-08 18:33:32,944 | INFO     | preparing for final server update for job 7004480526 in state='finished'
[2026-02-08 13:34:15] 2026-02-08 18:33:32,945 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7004480526/jobReport.json
[2026-02-08 13:34:15] 2026-02-08 18:33:32,948 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-08 13:34:15] 2026-02-08 18:33:32,948 | INFO     | this job has now completed (state=finished)
[2026-02-08 13:34:15] 2026-02-08 18:33:32,948 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 13:34:15] 2026-02-08 18:33:32,949 | INFO     | log transfer has been attempted: DONE
[2026-02-08 13:34:15] 2026-02-08 18:33:32,949 | INFO     | job 7004480526 has finished - writing final server update
[2026-02-08 13:34:15] 2026-02-08 18:33:32,949 | INFO     | total number of processed events: 400 (read)
[2026-02-08 13:34:15] 2026-02-08 18:33:32,951 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7004480526/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 13:34:15] 2026-02-08 18:33:32,951 | INFO     | extracted standard info from prmon json
[2026-02-08 13:34:15] 2026-02-08 18:33:32,951 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 13:34:15] 2026-02-08 18:33:32,951 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 13:34:15] 2026-02-08 18:33:32,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 13:34:15] 2026-02-08 18:33:32,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 13:34:15] 2026-02-08 18:33:32,954 | INFO     | fitting pss+swap vs Time
[2026-02-08 13:34:15] 2026-02-08 18:33:32,954 | INFO     | sum of square deviations: 549294020.0
[2026-02-08 13:34:15] 2026-02-08 18:33:32,955 | INFO     | sum of deviations: -1892647610.0
[2026-02-08 13:34:15] 2026-02-08 18:33:32,955 | INFO     | mean x: 1770571884.0
[2026-02-08 13:34:15] 2026-02-08 18:33:32,955 | INFO     | mean y: 2535887.8181818184
[2026-02-08 13:34:15] 2026-02-08 18:33:32,955 | INFO     | intersect: 6103218805.476374
[2026-02-08 13:34:15] 2026-02-08 18:33:32,956 | INFO     | chi2: 1.6916709180916658
[2026-02-08 13:34:15] 2026-02-08 18:33:32,956 | INFO     | sum of square deviations: 483971865.0
[2026-02-08 13:34:15] 2026-02-08 18:33:32,956 | INFO     | sum of deviations: -1366744833.0000043
[2026-02-08 13:34:15] 2026-02-08 18:33:32,957 | INFO     | mean x: 1770571731.5
[2026-02-08 13:34:15] 2026-02-08 18:33:32,957 | INFO     | mean y: 2537116.293103448
[2026-02-08 13:34:15] 2026-02-08 18:33:32,957 | INFO     | intersect: 5002662000.584664
[2026-02-08 13:34:15] 2026-02-08 18:33:32,957 | INFO     | chi2: 1.6931518947159594
[2026-02-08 13:34:15] 2026-02-08 18:33:32,957 | INFO     | current chi2=1.6931518947159594 (change=-0.08754519619952082 %)
[2026-02-08 13:34:15] 2026-02-08 18:33:32,957 | INFO     | right removable region: 115
[2026-02-08 13:34:15] 2026-02-08 18:33:32,958 | INFO     | sum of square deviations: 483971865.0
[2026-02-08 13:34:15] 2026-02-08 18:33:32,958 | INFO     | sum of deviations: -20569604552.0
[2026-02-08 13:34:15] 2026-02-08 18:33:32,958 | INFO     | mean x: 1770572036.5
[2026-02-08 13:34:15] 2026-02-08 18:33:32,958 | INFO     | mean y: 2578669.379310345
[2026-02-08 13:34:15] 2026-02-08 18:33:32,958 | INFO     | intersect: 75254818015.2229
[2026-02-08 13:34:15] 2026-02-08 18:33:32,959 | INFO     | chi2: 0.14417725635565906
[2026-02-08 13:34:15] 2026-02-08 18:33:32,959 | INFO     | current chi2=0.14417725635565906 (change=91.4772279399174 %)
[2026-02-08 13:34:15] 2026-02-08 18:33:32,959 | INFO     | sum of square deviations: 424045160.0
[2026-02-08 13:34:15] 2026-02-08 18:33:32,960 | INFO     | sum of deviations: -20250166096.000004
[2026-02-08 13:34:15] 2026-02-08 18:33:32,960 | INFO     | mean x: 1770572189.0
[2026-02-08 13:34:15] 2026-02-08 18:33:32,960 | INFO     | mean y: 2577709.189189189
[2026-02-08 13:34:15] 2026-02-08 18:33:32,960 | INFO     | intersect: 84555791126.85515
[2026-02-08 13:34:15] 2026-02-08 18:33:32,960 | INFO     | chi2: 0.11686931092259142
[2026-02-08 13:34:15] 2026-02-08 18:33:32,960 | INFO     | current chi2=0.11686931092259142 (change=18.94053620059457 %)
[2026-02-08 13:34:15] 2026-02-08 18:33:32,961 | INFO     | left removable region: 20
[2026-02-08 13:34:15] 2026-02-08 18:33:32,961 | INFO     | sum of square deviations: 265828240.0
[2026-02-08 13:34:15] 2026-02-08 18:33:32,961 | INFO     | sum of deviations: -12916971064.000002
[2026-02-08 13:34:15] 2026-02-08 18:33:32,961 | INFO     | mean x: 1770572311.0
[2026-02-08 13:34:15] 2026-02-08 18:33:32,961 | INFO     | mean y: 2562263.6210526316
[2026-02-08 13:34:15] 2026-02-08 18:33:32,962 | INFO     | intersect: 86037181113.39642
[2026-02-08 13:34:15] 2026-02-08 18:33:32,962 | INFO     | chi2: 0.10656024811117412
[2026-02-08 13:34:15] 2026-02-08 18:33:32,962 | INFO     | current memory leak: -48.59 B/s (using 95 data points, chi2=0.11)
[2026-02-08 13:34:15] 2026-02-08 18:33:32,962 | INFO     | could have reported an average CPU frequency of 1712 MHz (8 samples)
[2026-02-08 13:34:15] 2026-02-08 18:33:32,962 | INFO     | ..............................
[2026-02-08 13:34:15] 2026-02-08 18:33:32,963 | INFO     | . Timing measurements:
[2026-02-08 13:34:15] 2026-02-08 18:33:32,963 | INFO     | . get job = 0 s
[2026-02-08 13:34:15] 2026-02-08 18:33:32,963 | INFO     | . initial setup = 1 s
[2026-02-08 13:34:15] 2026-02-08 18:33:32,963 | INFO     | . payload setup = 8 s
[2026-02-08 13:34:15] 2026-02-08 18:33:32,963 | INFO     | . stage-in = 0 s
[2026-02-08 13:34:15] 2026-02-08 18:33:32,963 | INFO     | . payload execution = 7386 s
[2026-02-08 13:34:15] 2026-02-08 18:33:32,963 | INFO     | . stage-out = 2 s
[2026-02-08 13:34:15] 2026-02-08 18:33:32,963 | INFO     | . log creation = 0 s
[2026-02-08 13:34:15] 2026-02-08 18:33:32,963 | INFO     | ..............................
[2026-02-08 13:34:15] 2026-02-08 18:33:33,047 | INFO     | 
[2026-02-08 13:34:15] 2026-02-08 18:33:33,047 | INFO     | job summary report
[2026-02-08 13:34:15] 2026-02-08 18:33:33,047 | INFO     | --------------------------------------------------
[2026-02-08 13:34:15] 2026-02-08 18:33:33,047 | INFO     | PanDA job id: 7004480526
[2026-02-08 13:34:15] 2026-02-08 18:33:33,048 | INFO     | task id: 48442031
[2026-02-08 13:34:15] 2026-02-08 18:33:33,048 | INFO     | errors: (none)
[2026-02-08 13:34:15] 2026-02-08 18:33:33,048 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 13:34:15] 2026-02-08 18:33:33,048 | INFO     | pilot state: finished 
[2026-02-08 13:34:15] 2026-02-08 18:33:33,048 | INFO     | transexitcode: 0
[2026-02-08 13:34:15] 2026-02-08 18:33:33,048 | INFO     | exeerrorcode: 0
[2026-02-08 13:34:15] 2026-02-08 18:33:33,048 | INFO     | exeerrordiag: 
[2026-02-08 13:34:15] 2026-02-08 18:33:33,049 | INFO     | exitcode: 0
[2026-02-08 13:34:15] 2026-02-08 18:33:33,049 | INFO     | exitmsg: OK
[2026-02-08 13:34:15] 2026-02-08 18:33:33,049 | INFO     | cpuconsumptiontime: 53789 s
[2026-02-08 13:34:15] 2026-02-08 18:33:33,049 | INFO     | nevents: 400
[2026-02-08 13:34:15] 2026-02-08 18:33:33,049 | INFO     | neventsw: 0
[2026-02-08 13:34:15] 2026-02-08 18:33:33,049 | INFO     | pid: 11710
[2026-02-08 13:34:15] 2026-02-08 18:33:33,049 | INFO     | pgrp: 11710
[2026-02-08 13:34:15] 2026-02-08 18:33:33,049 | INFO     | corecount: 8
[2026-02-08 13:34:15] 2026-02-08 18:33:33,049 | INFO     | event service: False
[2026-02-08 13:34:15] 2026-02-08 18:33:33,050 | INFO     | sizes: {0: 2282669, 1: 2283073, 11: 2283073, 7399: 2310456, 7402: 2319454, 7403: 2319510, 7404: 2319832}
[2026-02-08 13:34:15] 2026-02-08 18:33:33,050 | INFO     | --------------------------------------------------
[2026-02-08 13:34:15] 2026-02-08 18:33:33,050 | INFO     | 
[2026-02-08 13:34:15] 2026-02-08 18:33:33,050 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-08 13:34:15] 2026-02-08 18:33:33,079 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,080 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,080 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,080 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,083 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 13:34:15] 2026-02-08 18:33:33,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,083 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 13:34:15] 2026-02-08 18:33:33,083 | INFO     | job 7004480526 has completed (purged errors)
[2026-02-08 13:34:15] 2026-02-08 18:33:33,083 | INFO     | overall cleanup function is called
[2026-02-08 13:34:15] 2026-02-08 18:33:34,092 | INFO     | --- collectZombieJob: --- 10, [11710]
[2026-02-08 13:34:15] 2026-02-08 18:33:34,092 | INFO     | zombie collector waiting for pid 11710
[2026-02-08 13:34:15] 2026-02-08 18:33:34,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 13:34:15] 2026-02-08 18:33:34,103 | INFO     | collected zombie processes
[2026-02-08 13:34:15] 2026-02-08 18:33:34,103 | INFO     | will attempt to kill all subprocesses of pid=11710
[2026-02-08 13:34:15] 2026-02-08 18:33:34,187 | INFO     | process IDs to be killed: [11710] (in reverse order)
[2026-02-08 13:34:15] 2026-02-08 18:33:34,247 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 13:34:15] 2026-02-08 18:33:34,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 13:34:15] 2026-02-08 18:33:34,251 | INFO     | did not find any defunct processes belonging to 11710
[2026-02-08 13:34:15] 2026-02-08 18:33:34,254 | INFO     | did not find any defunct processes belonging to 11710
[2026-02-08 13:34:15] 2026-02-08 18:33:34,254 | INFO     | ready for new job
[2026-02-08 13:34:15] 2026-02-08 18:33:34,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 13:34:15] 2026-02-08 18:33:34,255 | INFO     | **************************************
[2026-02-08 13:34:15] 2026-02-08 18:33:34,256 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 13:34:15] 2026-02-08 18:33:34,256 | INFO     | **************************************
[2026-02-08 13:34:15] 2026-02-08 18:33:34,256 | INFO     | 
[2026-02-08 13:34:15] 2026-02-08 18:33:34,256 | INFO     | architecture information:
[2026-02-08 13:34:15] 2026-02-08 18:33:34,257 | INFO     | executing command: cat /etc/os-release
[2026-02-08 13:34:15] 2026-02-08 18:33:34,276 | INFO     | cat /etc/os-release:
[2026-02-08 13:34:15] NAME="CentOS Linux"
[2026-02-08 13:34:15] VERSION="7 (Core)"
[2026-02-08 13:34:15] ID="centos"
[2026-02-08 13:34:15] ID_LIKE="rhel fedora"
[2026-02-08 13:34:15] VERSION_ID="7"
[2026-02-08 13:34:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 13:34:15] ANSI_COLOR="0;31"
[2026-02-08 13:34:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 13:34:15] HOME_URL="https://www.centos.org/"
[2026-02-08 13:34:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 13:34:15] 
[2026-02-08 13:34:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 13:34:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 13:34:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 13:34:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 13:34:15] 
[2026-02-08 13:34:15] 2026-02-08 18:33:34,276 | INFO     | **************************************
[2026-02-08 13:34:15] 2026-02-08 18:33:34,779 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-08 13:34:15] 2026-02-08 18:33:34,800 | INFO     | sufficient remaining disk space (18037604352 B)
[2026-02-08 13:34:15] 2026-02-08 18:33:34,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 13:34:15] 2026-02-08 18:33:34,801 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 13:34:15] 2026-02-08 18:33:34,801 | INFO     | update_server=False
[2026-02-08 13:34:15] 2026-02-08 18:33:34,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 13:34:15] 2026-02-08 18:33:34,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 13:34:15] 2026-02-08 18:33:34,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 13:34:15] 2026-02-08 18:33:34,885 | INFO     | all data control threads have been joined
[2026-02-08 13:34:15] 2026-02-08 18:33:34,897 | INFO     | all payload control threads have been joined
[2026-02-08 13:34:15] 2026-02-08 18:33:35,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 13:34:15] 2026-02-08 18:33:35,119 | INFO     | aborting loop
[2026-02-08 13:34:15] 2026-02-08 18:33:35,805 | INFO     | [job] retrieve thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:35,806 | INFO     | all job control threads have been joined
[2026-02-08 13:34:15] 2026-02-08 18:33:35,808 | INFO     | [job] queue monitor thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:35,891 | INFO     | [data] control thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:35,902 | INFO     | [payload] control thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:36,125 | INFO     | [job] job monitor thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:36,154 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:36,427 | INFO     | [data] copytool_in thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:36,511 | INFO     | [payload] failed_post thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:36,712 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:36,808 | INFO     | [data] copytool_out thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:36,812 | INFO     | [job] control thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:37,169 | INFO     | [job] validate thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:37,216 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:37,296 | INFO     | [payload] validate_post thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:37,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 13:34:15] 2026-02-08 18:33:41,481 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:33:45,164 | INFO     | job.realtimelogging is not enabled
[2026-02-08 13:34:15] 2026-02-08 18:33:46,170 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 13:34:15] 2026-02-08 18:34:05,251 | INFO     | PID=9129 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-08 13:34:15] 2026-02-08 18:34:05,252 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 13:34:15] 2026-02-08 18:34:05,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 13:34:15] 2026-02-08 18:34:05,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 13:34:15] 2026-02-08 18:34:09,133 | INFO     | [monitor] cgroup control has ended
[2026-02-08 13:34:15] 2026-02-08 18:34:10,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140274140992)>', '<ExcThread(monitor, started 140139372193536)>']
[2026-02-08 13:34:15] 2026-02-08 18:34:10,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 13:34:15] 2026-02-08 18:34:10,282 | INFO     | [monitor] control thread has ended
[2026-02-08 13:34:15] 2026-02-08 18:34:15,154 | INFO     | all workflow threads have been joined
[2026-02-08 13:34:15] 2026-02-08 18:34:15,155 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 13:34:15] 2026-02-08 18:34:15,155 | INFO     | traces error code: 0
[2026-02-08 13:34:15] 2026-02-08 18:34:15,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 13:34:15] 2026-02-08 18:34:15,254 [wrapper] ==== pilot stdout END ====
[2026-02-08 13:34:15] 2026-02-08 18:34:15,260 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 13:34:15] 2026-02-08 18:34:15,265 [wrapper] pilotpid: 9129
[2026-02-08 13:34:15] 2026-02-08 18:34:15,269 [wrapper] Pilot exit status: 0
[2026-02-08 13:34:15] 2026-02-08 18:34:15,289 [wrapper] pandaids: 7004480526 7004480526
[2026-02-08 13:34:15] 2026-02-08 18:34:15,332 [wrapper] cleanup supervisor_pilot 29721 9130
[2026-02-08 13:34:15] 2026-02-08 18:34:15,336 [wrapper] Test setup, not cleaning
[2026-02-08 13:34:15] 2026-02-08 18:34:15,341 [wrapper] apfmon messages muted
[2026-02-08 13:34:15] 2026-02-08 18:34:15,346 [wrapper] ==== wrapper stdout END ====
[2026-02-08 13:34:15] 2026-02-08 18:34:15,351 [wrapper] ==== wrapper stderr END ====
[2026-02-08 13:34:15]  *** Error codes and diagnostics ***
[2026-02-08 13:34:15]     "exeErrorCode": 0,
[2026-02-08 13:34:15]     "exeErrorDiag": "",
[2026-02-08 13:34:15]     "pilotErrorCode": 0,
[2026-02-08 13:34:15]     "pilotErrorDiag": "",
[2026-02-08 13:34:15]  *** Listing of results directory ***
[2026-02-08 13:34:15] total 1142408
[2026-02-08 13:34:15] drwx------ 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas    584627 Feb  8 04:40 pilot3.tar.gz
[2026-02-08 13:34:15] -rwx------ 1 boincer umatlas     36322 Feb  8 04:40 runpilot2-wrapper.sh
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas      5111 Feb  8 04:40 queuedata.json
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas       100 Feb  8 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 13:34:15] -rwxr-xr-x 1 boincer umatlas      7986 Feb  8 09:54 run_atlas
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas       105 Feb  8 09:54 job.xml
[2026-02-08 13:34:15] -rw-r--r-- 3 boincer umatlas 491311131 Feb  8 09:55 EVNT.48442027._000182.pool.root.1
[2026-02-08 13:34:15] -rw-r--r-- 3 boincer umatlas 491311131 Feb  8 09:55 ATLAS.root_0
[2026-02-08 13:34:15] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 09:55 start_atlas.sh
[2026-02-08 13:34:15] drwxrwx--x 2 boincer umatlas      4096 Feb  8 09:55 shared
[2026-02-08 13:34:15] -rw-r--r-- 2 boincer umatlas    597947 Feb  8 09:55 input.tar.gz
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas         0 Feb  8 09:55 boinc_lockfile
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas      2529 Feb  8 11:29 pandaJob.out
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas        57 Feb  8 11:29 setup.sh.local
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas   1009488 Feb  8 11:29 agis_schedconf.cvmfs.json
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas       433 Feb  8 11:29 workernode_map.json
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas      5910 Feb  8 13:31 init_data.xml
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas 180364050 Feb  8 13:32 HITS.48442031._006185.pool.root.1
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas       531 Feb  8 13:33 boinc_task_state.xml
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas      1049 Feb  8 13:33 memory_monitor_summary.json
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas   1513088 Feb  8 13:33 agis_ddmendpoints.agis.ALL.json
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas    401133 Feb  8 13:33 log.48442031._006185.job.log.tgz.1
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas      6407 Feb  8 13:33 heartbeat.json
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas      8192 Feb  8 13:33 boinc_mmap_file
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas        28 Feb  8 13:33 wrapper_checkpoint.txt
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas        96 Feb  8 13:34 pilot_heartbeat.json
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas      4813 Feb  8 13:34 pilotlog.txt
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas   1047694 Feb  8 13:34 log.48442031._006185.job.log.1
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas       357 Feb  8 13:34 output.list
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas       620 Feb  8 13:34 runtime_log
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas   1464320 Feb  8 13:34 result.tar.gz
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas       783 Feb  8 13:34 xBELDm5RG98n9Rq4apOajLDm4fhM0noT9bVooX4SDmnocKDmvj6Pnm.diag
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas      9426 Feb  8 13:34 runtime_log.err
[2026-02-08 13:34:15] -rw-r--r-- 1 boincer umatlas     23351 Feb  8 13:34 stderr.txt
[2026-02-08 13:34:15] HITS file was successfully produced:
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas 180364050 Feb  8 13:32 shared/HITS.pool.root.1
[2026-02-08 13:34:15]  *** Contents of shared directory: ***
[2026-02-08 13:34:15] total 657972
[2026-02-08 13:34:15] -rw-r--r-- 3 boincer umatlas 491311131 Feb  8 09:55 ATLAS.root_0
[2026-02-08 13:34:15] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 09:55 start_atlas.sh
[2026-02-08 13:34:15] -rw-r--r-- 2 boincer umatlas    597947 Feb  8 09:55 input.tar.gz
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas 180364050 Feb  8 13:32 HITS.pool.root.1
[2026-02-08 13:34:15] -rw------- 1 boincer umatlas   1464320 Feb  8 13:34 result.tar.gz
13:34:17 (4945): run_atlas exited; CPU time 53754.265941
13:34:17 (4945): called boinc_finish(0)

</stderr_txt>
]]>

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