Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-08 09:28:57 (46126): vboxwrapper version 26210
2026-02-08 09:28:57 (46126): BOINC client version: 8.2.8
2026-02-08 09:28:57 (46126): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2026-02-08 09:28:57 (46126): Detected: Sandbox Configuration Enabled
2026-02-08 09:28:57 (46126): Successfully copied 'init_data.xml' to the shared directory.
2026-02-08 09:28:57 (46126): Create VM. (boinc_542ac1198535f360, slot#1)
2026-02-08 09:28:57 (46126): Setting Memory Size for VM. (4400MB)
2026-02-08 09:28:58 (46126): Setting CPU Count for VM. (4)
2026-02-08 09:28:58 (46126): Setting Chipset Options for VM.
2026-02-08 09:28:58 (46126): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-08 09:28:58 (46126): Setting Boot Options for VM.
2026-02-08 09:28:58 (46126): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-08 09:28:58 (46126): Enabling VM Network Access.
2026-02-08 09:28:58 (46126): Disabling USB Support for VM.
2026-02-08 09:28:59 (46126): Disabling COM Port Support for VM.
2026-02-08 09:28:59 (46126): Disabling Audio Support for VM.
2026-02-08 09:28:59 (46126): Disabling Clipboard Support for VM.
2026-02-08 09:28:59 (46126): Disabling Drag and Drop Support for VM.
2026-02-08 09:28:59 (46126): Adding storage controller(s) to VM.
2026-02-08 09:28:59 (46126): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-08 09:28:59 (46126): Adding VirtualBox Guest Additions to VM.
2026-02-08 09:28:59 (46126): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-08 09:29:00 (46126): forwarding host port 52157 to guest port 80
2026-02-08 09:29:00 (46126): Enabling remote desktop for VM.
2026-02-08 09:29:00 (46126): Required extension pack not installed, remote desktop not enabled.
2026-02-08 09:29:00 (46126): Enabling shared directory for VM.
2026-02-08 09:29:00 (46126): Starting VM using VBoxManage interface. (boinc_542ac1198535f360, slot#1)
2026-02-08 09:29:02 (46126): Successfully started VM. (PID = '46186')
2026-02-08 09:29:02 (46126): Reporting VM Process ID to BOINC.
2026-02-08 09:29:02 (46126): Guest Log: BIOS: VirtualBox 6.1.50
2026-02-08 09:29:02 (46126): Guest Log: CPUID EDX: 0x178bfbff
2026-02-08 09:29:02 (46126): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-08 09:29:02 (46126): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-08 09:29:02 (46126): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-08 09:29:02 (46126): Detected: Web Application Enabled (http://localhost:52157)
2026-02-08 09:29:02 (46126): Preference change detected
2026-02-08 09:29:02 (46126): Setting CPU throttle for VM. (100%)
2026-02-08 09:29:02 (46126): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-08 09:29:04 (46126): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-08 09:29:04 (46126): Guest Log: BIOS: Booting from Hard Disk...
2026-02-08 09:29:07 (46126): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-08 09:29:07 (46126): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-08 09:29:07 (46126): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-08 09:29:19 (46126): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-08 09:29:19 (46126): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-08 09:29:39 (46126): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-08 09:29:39 (46126): Guest Log: 00:00:00.000307 main     Log opened 2026-02-08T14:29:37.668924000Z
2026-02-08 09:29:39 (46126): Guest Log: 00:00:00.000476 main     OS Product: Linux
2026-02-08 09:29:39 (46126): Guest Log: 00:00:00.000548 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-08 09:29:39 (46126): Guest Log: 00:00:00.000606 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-08 09:29:39 (46126): Guest Log: 00:00:00.000664 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-08 09:29:39 (46126): Guest Log: 00:00:00.000665 main     Process ID: 1308
2026-02-08 09:29:39 (46126): Guest Log: 00:00:00.000666 main     Package type: LINUX_64BITS_GENERIC
2026-02-08 09:29:39 (46126): Guest Log: 00:00:00.002846 main     5.2.32 r132073 started. Verbose level = 0
2026-02-08 09:29:39 (46126): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-08 09:29:39 (46126): Guest Log: [INFO] Mounting shared directory
2026-02-08 09:29:39 (46126): Guest Log: [INFO] Checking for init_data.xml
2026-02-08 09:29:44 (46126): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-08 09:29:44 (46126): Guest Log: [INFO] Detected branch: prod
2026-02-08 09:29:44 (46126): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-08 09:29:44 (46126): Guest Log: Copying input files
2026-02-08 09:29:54 (46126): Guest Log: Copied input files into RunAtlas.
2026-02-08 09:29:54 (46126): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-08 09:29:54 (46126): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-08 09:29:54 (46126): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-08 09:29:54 (46126): Guest Log: Further information can be found at the LHC@home message board.
2026-02-08 09:30:06 (46126): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-08 09:30:06 (46126): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-08 09:30:06 (46126): Guest Log: 2.6.3.0 1582 0 32188 156022 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-08 09:30:10 (46126): Guest Log: copied the webapp to /var/www
2026-02-08 09:30:10 (46126): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-08 09:30:10 (46126): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-08 09:30:11 (46126): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-08 09:30:11 (46126): Guest Log:  *** Starting ATLAS job. (PandaID=7004480566 taskID=48442031) ***
2026-02-08 10:52:00 (46126): Preference change detected
2026-02-08 10:52:00 (46126): Setting CPU throttle for VM. (100%)
2026-02-08 10:52:01 (46126): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-08 11:09:02 (46126): Status Report: Elapsed Time: '6000.406491'
2026-02-08 11:09:02 (46126): Status Report: CPU Time: '11510.500000'
2026-02-08 12:49:02 (46126): Status Report: Elapsed Time: '12000.406491'
2026-02-08 12:49:02 (46126): Status Report: CPU Time: '23842.920000'
2026-02-08 14:29:02 (46126): Status Report: Elapsed Time: '18000.406491'
2026-02-08 14:29:02 (46126): Status Report: CPU Time: '36236.040000'
2026-02-08 16:09:02 (46126): Status Report: Elapsed Time: '24000.406491'
2026-02-08 16:09:02 (46126): Status Report: CPU Time: '48603.570000'
2026-02-08 17:49:02 (46126): Status Report: Elapsed Time: '30000.406491'
2026-02-08 17:49:02 (46126): Status Report: CPU Time: '60947.200000'
2026-02-08 19:29:02 (46126): Status Report: Elapsed Time: '36000.406491'
2026-02-08 19:29:02 (46126): Status Report: CPU Time: '73277.480000'
2026-02-08 20:41:36 (46126): Guest Log:  *** Job finished ***
2026-02-08 20:41:36 (46126): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:16,693 | INFO     | all workflow threads have been joined
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:16,694 | INFO     | end of generic workflow (traces error code: 0)
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:16,694 | INFO     | traces error code: 0
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:16,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:30,864 | INFO     | PID=5987 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:30,865 | INFO     | found 0 job(s) in 20 queues
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:30,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:30,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:30,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:30,865 | INFO     | [monitor] control thread has ended
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:31,329 [wrapper] ==== pilot stdout END ====
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:31,337 [wrapper] ==== wrapper stdout RESUME ====
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:31,346 [wrapper] pilotpid: 5987
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:31,356 [wrapper] Pilot exit status: 0
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:31,484 [wrapper] pandaids: 7004480566
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:31,536 [wrapper] cleanup supervisor_pilot  4007 5988
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:31,550 [wrapper] Test setup, not cleaning
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:31,559 [wrapper] apfmon messages muted
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:31,566 [wrapper] ==== wrapper stdout END ====
2026-02-08 20:41:36 (46126): Guest Log: 2026-02-09 01:41:31,575 [wrapper] ==== wrapper stderr END ====
2026-02-08 20:41:36 (46126): Guest Log:  *** Error codes and diagnostics ***
2026-02-08 20:41:36 (46126): Guest Log:     "exeErrorCode": 0,
2026-02-08 20:41:36 (46126): Guest Log:     "exeErrorDiag": "",
2026-02-08 20:41:36 (46126): Guest Log:     "pilotErrorCode": 0,
2026-02-08 20:41:36 (46126): Guest Log:     "pilotErrorDiag": "",
2026-02-08 20:41:36 (46126): Guest Log:  *** Listing of results directory ***
2026-02-08 20:41:36 (46126): Guest Log: total 197504
2026-02-08 20:41:36 (46126): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  8 09:40 pilot3.tar.gz
2026-02-08 20:41:36 (46126): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  8 09:40 runpilot2-wrapper.sh
2026-02-08 20:41:36 (46126): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  8 09:40 queuedata.json
2026-02-08 20:41:36 (46126): Guest Log: -rw-r-----. 1 atlas atlas     15845 Feb  8 14:29 start_atlas.sh
2026-02-08 20:41:36 (46126): Guest Log: -rw-r-----. 1 atlas atlas    597953 Feb  8 14:29 input.tar.gz
2026-02-08 20:41:36 (46126): Guest Log: -rw-r--r--. 1 atlas atlas      5622 Feb  8 14:29 init_data.xml
2026-02-08 20:41:36 (46126): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  8 14:29 EVNT.48442027._000183.pool.root.1 -> /data/./ATLAS.root_0
2026-02-08 20:41:36 (46126): Guest Log: -rw-r--r--. 1 atlas atlas      2529 Feb  8 14:30 pandaJob.out
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas   1009496 Feb  8 14:31 agis_schedconf.cvmfs.json
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas       427 Feb  8 14:31 workernode_map.json
2026-02-08 20:41:36 (46126): Guest Log: drwx------. 5 atlas atlas      4096 Feb  8 14:31 pilot3
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas 186091807 Feb  9 01:40 HITS.48442031._006225.pool.root.1
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas      1032 Feb  9 01:40 memory_monitor_summary.json
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas   1513088 Feb  9 01:40 agis_ddmendpoints.agis.ALL.json
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas    775808 Feb  9 01:40 log.48442031._006225.job.log.tgz.1
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas        95 Feb  9 01:40 pilot_heartbeat.json
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas      6372 Feb  9 01:40 heartbeat.json
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas       744 Feb  9 01:41 pilotlog.txt
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas   5366914 Feb  9 01:41 log.48442031._006225.job.log.1
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas       357 Feb  9 01:41 output.list
2026-02-08 20:41:36 (46126): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  9 01:41 runtime_log
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas   6164480 Feb  9 01:41 result.tar.gz
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas       685 Feb  9 01:41 TwNMDm5RG98n9Rq4apOajLDm4fhM0noT9bVooX4SDm9ocKDmpIiX9n.diag
2026-02-08 20:41:36 (46126): Guest Log: -rw-r--r--. 1 atlas atlas      8824 Feb  9 01:41 runtime_log.err
2026-02-08 20:41:36 (46126): Guest Log: Looking for outputfile HITS.48442031._006225.pool.root.1
2026-02-08 20:41:36 (46126): Guest Log: HITS file was successfully produced
2026-02-08 20:41:36 (46126): Guest Log: -rw-------. 1 atlas atlas 186091807 Feb  9 01:40 /home/atlas/RunAtlas/HITS.48442031._006225.pool.root.1
2026-02-08 20:41:37 (46126): Guest Log: Successfully finished the ATLAS job!
2026-02-08 20:41:37 (46126): Guest Log: Copying the results back to the shared directory!
2026-02-08 20:41:37 (46126): Guest Log:  *** Contents of shared directory: ***
2026-02-08 20:41:37 (46126): Guest Log: total 496408
2026-02-08 20:41:37 (46126): Guest Log: -rw-rw----. 1 root root 492404138 Feb  8 14:28 ATLAS.root_0
2026-02-08 20:41:37 (46126): Guest Log: -rw-rw-r--. 1 root root      5622 Feb  8 14:28 init_data.xml
2026-02-08 20:41:37 (46126): Guest Log: -rw-rw----. 1 root root    597953 Feb  8 14:28 input.tar.gz
2026-02-08 20:41:37 (46126): Guest Log: -rw-r--r--. 1 root root   6164480 Feb  9 01:41 result.tar.gz
2026-02-08 20:41:37 (46126): Guest Log: -rw-rw----. 1 root root     15845 Feb  8 14:28 start_atlas.sh
2026-02-08 20:41:37 (46126): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-08 20:41:37 (46126): VM Completion File Detected.
2026-02-08 20:41:37 (46126): Powering off VM.
2026-02-08 20:41:40 (46126): Successfully stopped VM.
2026-02-08 20:41:40 (46126): Deregistering VM. (boinc_542ac1198535f360, slot#1)
2026-02-08 20:41:41 (46126): Removing network bandwidth throttle group from VM.
2026-02-08 20:41:42 (46126): Removing VM from VirtualBox.
2026-02-08 20:41:47 (46126): called boinc_finish(0)

</stderr_txt>
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