Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:22:24 (16373): wrapper (7.7.26015): starting
09:22:24 (16373): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 09:22:24] Arguments: --nthreads 12
[2026-02-08 09:22:24] Threads: 12
[2026-02-08 09:22:24] Checking for CVMFS
[2026-02-08 09:22:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 09:22:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 09:22:24] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 09:22:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 09:22:24] 2.11.2.0 2979 394356 107664 156022 3 49 19778148 20275201 1 130560 2 168576918 99.954 22791889 16649 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-08 09:22:24] CVMFS is ok
[2026-02-08 09:22:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 09:22:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 09:22:24] Further information can be found at the LHC@home message board.
[2026-02-08 09:22:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 09:22:24] Checking for apptainer binary...
[2026-02-08 09:22:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 09:22:24] Running /usr/bin/apptainer --version
[2026-02-08 09:22:25] apptainer version 1.3.2-1.el7
[2026-02-08 09:22:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 09:22:26] c-205-7.aglt2.org
[2026-02-08 09:22:26] apptainer works
[2026-02-08 09:22:26] Set ATHENA_PROC_NUMBER=12
[2026-02-08 09:22:26] Set ATHENA_CORE_NUMBER=12
[2026-02-08 09:22:26] Starting ATLAS job with PandaID=7004483354
[2026-02-08 09:22:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 11:02:22]  *** The last 200 lines of the pilot log: ***
[2026-02-08 11:02:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 11:02:22]  is_altstaged=None
[2026-02-08 11:02:22]  is_tar=False
[2026-02-08 11:02:22]  lfn=log.48431113._007472.job.log.tgz.1
[2026-02-08 11:02:22]  mtime=0
[2026-02-08 11:02:22]  protocol_id=None
[2026-02-08 11:02:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 11:02:22]  replicas=None
[2026-02-08 11:02:22]  scope=mc23_13p6TeV
[2026-02-08 11:02:22]  status=None
[2026-02-08 11:02:22]  status_code=0
[2026-02-08 11:02:22]  storage_token=
[2026-02-08 11:02:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7004483354/log.48431113._007472.job.log.tgz.1
[2026-02-08 11:02:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/16/log.48431113._007472.job.log.tgz.1
[2026-02-08 11:02:22]  workdir=None
[2026-02-08 11:02:22] ]
[2026-02-08 11:02:22] 2026-02-08 16:01:46,579 | INFO     | transferring file log.48431113._007472.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7004483354/log.48431113._007472.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-08 11:02:22] 2026-02-08 16:01:46,579 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7004483354/log.48431113._007472.job.log.tgz.1 /tmp/boinchome/slots/0/log.48431113._007472.job
[2026-02-08 11:02:22] 2026-02-08 16:01:46,605 | INFO     | adding to output.list: log.48431113._007472.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/16/log.48431113._007472.job.log.tg
[2026-02-08 11:02:22] 2026-02-08 16:01:46,606 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 11:02:22] 2026-02-08 16:01:46,606 | INFO     | summary of transferred files:
[2026-02-08 11:02:22] 2026-02-08 16:01:46,607 | INFO     |  -- lfn=log.48431113._007472.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 11:02:22] 2026-02-08 16:01:46,607 | INFO     | stage-out finished correctly
[2026-02-08 11:02:22] 2026-02-08 16:01:46,969 | INFO     | time since job start (5940s) is within the limit (349056.0s)
[2026-02-08 11:02:22] 2026-02-08 16:01:48,519 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 11:02:22] 2026-02-08 16:01:48,974 | INFO     | time since job start (5942s) is within the limit (349056.0s)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,336 | INFO     | job 7004483354 has state=finished
[2026-02-08 11:02:22] 2026-02-08 16:01:49,336 | INFO     | preparing for final server update for job 7004483354 in state='finished'
[2026-02-08 11:02:22] 2026-02-08 16:01:49,411 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,411 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7004483354/jobReport.json
[2026-02-08 11:02:22] 2026-02-08 16:01:49,413 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-08 11:02:22] 2026-02-08 16:01:49,414 | INFO     | this job has now completed (state=finished)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,414 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,414 | INFO     | log transfer has been attempted: DONE
[2026-02-08 11:02:22] 2026-02-08 16:01:49,414 | INFO     | job 7004483354 has finished - writing final server update
[2026-02-08 11:02:22] 2026-02-08 16:01:49,414 | INFO     | total number of processed events: 400 (read)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,416 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7004483354/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,417 | INFO     | extracted standard info from prmon json
[2026-02-08 11:02:22] 2026-02-08 16:01:49,417 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 11:02:22] 2026-02-08 16:01:49,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 11:02:22] 2026-02-08 16:01:49,417 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 11:02:22] 2026-02-08 16:01:49,417 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 11:02:22] 2026-02-08 16:01:49,419 | INFO     | fitting pss+swap vs Time
[2026-02-08 11:02:22] 2026-02-08 16:01:49,419 | INFO     | sum of square deviations: 226022842.5
[2026-02-08 11:02:22] 2026-02-08 16:01:49,420 | INFO     | sum of deviations: -12576960480.000004
[2026-02-08 11:02:22] 2026-02-08 16:01:49,420 | INFO     | mean x: 1770563609.5
[2026-02-08 11:02:22] 2026-02-08 16:01:49,420 | INFO     | mean y: 2872676.9555555554
[2026-02-08 11:02:22] 2026-02-08 16:01:49,420 | INFO     | intersect: 98525253413.79483
[2026-02-08 11:02:22] 2026-02-08 16:01:49,420 | INFO     | chi2: 0.15408370666881321
[2026-02-08 11:02:22] 2026-02-08 16:01:49,420 | INFO     | current memory leak: -55.64 B/s (using 90 data points, chi2=0.15)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,421 | INFO     | could have reported an average CPU frequency of 1718 MHz (7 samples)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,421 | INFO     | ..............................
[2026-02-08 11:02:22] 2026-02-08 16:01:49,421 | INFO     | . Timing measurements:
[2026-02-08 11:02:22] 2026-02-08 16:01:49,421 | INFO     | . get job = 0 s
[2026-02-08 11:02:22] 2026-02-08 16:01:49,421 | INFO     | . initial setup = 7 s
[2026-02-08 11:02:22] 2026-02-08 16:01:49,421 | INFO     | . payload setup = 7 s
[2026-02-08 11:02:22] 2026-02-08 16:01:49,421 | INFO     | . stage-in = 0 s
[2026-02-08 11:02:22] 2026-02-08 16:01:49,421 | INFO     | . payload execution = 5917 s
[2026-02-08 11:02:22] 2026-02-08 16:01:49,422 | INFO     | . stage-out = 0 s
[2026-02-08 11:02:22] 2026-02-08 16:01:49,422 | INFO     | . log creation = 0 s
[2026-02-08 11:02:22] 2026-02-08 16:01:49,422 | INFO     | ..............................
[2026-02-08 11:02:22] 2026-02-08 16:01:49,499 | INFO     | 
[2026-02-08 11:02:22] 2026-02-08 16:01:49,499 | INFO     | job summary report
[2026-02-08 11:02:22] 2026-02-08 16:01:49,499 | INFO     | --------------------------------------------------
[2026-02-08 11:02:22] 2026-02-08 16:01:49,499 | INFO     | PanDA job id: 7004483354
[2026-02-08 11:02:22] 2026-02-08 16:01:49,499 | INFO     | task id: 48431113
[2026-02-08 11:02:22] 2026-02-08 16:01:49,500 | INFO     | errors: (none)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,500 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 11:02:22] 2026-02-08 16:01:49,500 | INFO     | pilot state: finished 
[2026-02-08 11:02:22] 2026-02-08 16:01:49,500 | INFO     | transexitcode: 0
[2026-02-08 11:02:22] 2026-02-08 16:01:49,500 | INFO     | exeerrorcode: 0
[2026-02-08 11:02:22] 2026-02-08 16:01:49,500 | INFO     | exeerrordiag: 
[2026-02-08 11:02:22] 2026-02-08 16:01:49,501 | INFO     | exitcode: 0
[2026-02-08 11:02:22] 2026-02-08 16:01:49,501 | INFO     | exitmsg: OK
[2026-02-08 11:02:22] 2026-02-08 16:01:49,501 | INFO     | cpuconsumptiontime: 65010 s
[2026-02-08 11:02:22] 2026-02-08 16:01:49,501 | INFO     | nevents: 400
[2026-02-08 11:02:22] 2026-02-08 16:01:49,501 | INFO     | neventsw: 0
[2026-02-08 11:02:22] 2026-02-08 16:01:49,501 | INFO     | pid: 24500
[2026-02-08 11:02:22] 2026-02-08 16:01:49,502 | INFO     | pgrp: 24500
[2026-02-08 11:02:22] 2026-02-08 16:01:49,502 | INFO     | corecount: 12
[2026-02-08 11:02:22] 2026-02-08 16:01:49,502 | INFO     | event service: False
[2026-02-08 11:02:22] 2026-02-08 16:01:49,502 | INFO     | sizes: {0: 2282630, 1: 2283147, 12: 2283147, 5928: 2309872, 5929: 2318870, 5931: 2318926, 5932: 2319248}
[2026-02-08 11:02:22] 2026-02-08 16:01:49,502 | INFO     | --------------------------------------------------
[2026-02-08 11:02:22] 2026-02-08 16:01:49,502 | INFO     | 
[2026-02-08 11:02:22] 2026-02-08 16:01:49,503 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-08 11:02:22] 2026-02-08 16:01:49,528 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,528 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,528 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,529 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,531 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,531 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 11:02:22] 2026-02-08 16:01:49,532 | INFO     | job 7004483354 has completed (purged errors)
[2026-02-08 11:02:22] 2026-02-08 16:01:49,532 | INFO     | overall cleanup function is called
[2026-02-08 11:02:22] 2026-02-08 16:01:50,541 | INFO     | --- collectZombieJob: --- 10, [24500]
[2026-02-08 11:02:22] 2026-02-08 16:01:50,541 | INFO     | zombie collector waiting for pid 24500
[2026-02-08 11:02:22] 2026-02-08 16:01:50,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 11:02:22] 2026-02-08 16:01:50,541 | INFO     | collected zombie processes
[2026-02-08 11:02:22] 2026-02-08 16:01:50,541 | INFO     | will attempt to kill all subprocesses of pid=24500
[2026-02-08 11:02:22] 2026-02-08 16:01:50,630 | INFO     | process IDs to be killed: [24500] (in reverse order)
[2026-02-08 11:02:22] 2026-02-08 16:01:50,684 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 11:02:22] 2026-02-08 16:01:50,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 11:02:22] 2026-02-08 16:01:50,687 | INFO     | did not find any defunct processes belonging to 24500
[2026-02-08 11:02:22] 2026-02-08 16:01:50,689 | INFO     | did not find any defunct processes belonging to 24500
[2026-02-08 11:02:22] 2026-02-08 16:01:50,690 | INFO     | ready for new job
[2026-02-08 11:02:22] 2026-02-08 16:01:50,690 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 11:02:22] 2026-02-08 16:01:50,691 | INFO     | **************************************
[2026-02-08 11:02:22] 2026-02-08 16:01:50,691 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 11:02:22] 2026-02-08 16:01:50,691 | INFO     | **************************************
[2026-02-08 11:02:22] 2026-02-08 16:01:50,691 | INFO     | 
[2026-02-08 11:02:22] 2026-02-08 16:01:50,692 | INFO     | architecture information:
[2026-02-08 11:02:22] 2026-02-08 16:01:50,692 | INFO     | executing command: cat /etc/os-release
[2026-02-08 11:02:22] 2026-02-08 16:01:50,707 | INFO     | cat /etc/os-release:
[2026-02-08 11:02:22] NAME="CentOS Linux"
[2026-02-08 11:02:22] VERSION="7 (Core)"
[2026-02-08 11:02:22] ID="centos"
[2026-02-08 11:02:22] ID_LIKE="rhel fedora"
[2026-02-08 11:02:22] VERSION_ID="7"
[2026-02-08 11:02:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 11:02:22] ANSI_COLOR="0;31"
[2026-02-08 11:02:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 11:02:22] HOME_URL="https://www.centos.org/"
[2026-02-08 11:02:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 11:02:22] 
[2026-02-08 11:02:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 11:02:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 11:02:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 11:02:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 11:02:22] 
[2026-02-08 11:02:22] 2026-02-08 16:01:50,707 | INFO     | **************************************
[2026-02-08 11:02:22] 2026-02-08 16:01:51,210 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-08 11:02:22] 2026-02-08 16:01:51,227 | INFO     | sufficient remaining disk space (28401729536 B)
[2026-02-08 11:02:22] 2026-02-08 16:01:51,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 11:02:22] 2026-02-08 16:01:51,227 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 11:02:22] 2026-02-08 16:01:51,228 | INFO     | update_server=False
[2026-02-08 11:02:22] 2026-02-08 16:01:51,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 11:02:22] 2026-02-08 16:01:51,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 11:02:22] 2026-02-08 16:01:51,609 | INFO     | all data control threads have been joined
[2026-02-08 11:02:22] 2026-02-08 16:01:51,852 | INFO     | all payload control threads have been joined
[2026-02-08 11:02:22] 2026-02-08 16:01:51,934 | INFO     | all job control threads have been joined
[2026-02-08 11:02:22] 2026-02-08 16:01:52,078 | WARNING  | process 24500 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 11:02:22] 2026-02-08 16:01:52,151 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 11:02:22] 2026-02-08 16:01:52,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 11:02:22] 2026-02-08 16:01:52,233 | INFO     | [job] retrieve thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:52,234 | INFO     | [job] queue monitor thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:52,238 | INFO     | number of running child processes to parent process 24500: 1
[2026-02-08 11:02:22] 2026-02-08 16:01:52,239 | INFO     | maximum number of monitored processes: 6
[2026-02-08 11:02:22] 2026-02-08 16:01:52,239 | INFO     | aborting job monitoring since job object (job id=7004483354) has expired
[2026-02-08 11:02:22] 2026-02-08 16:01:52,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 11:02:22] 2026-02-08 16:01:52,239 | INFO     | will abort loop
[2026-02-08 11:02:22] 2026-02-08 16:01:52,403 | INFO     | [payload] failed_post thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:52,440 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:52,607 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:52,614 | INFO     | [data] control thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:52,857 | INFO     | [payload] control thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:52,939 | INFO     | [job] control thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:52,998 | INFO     | [payload] validate_post thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:53,045 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:53,066 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:53,070 | INFO     | [job] validate thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:53,244 | INFO     | [job] job monitor thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:53,641 | INFO     | [data] copytool_in thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:54,199 | INFO     | [data] copytool_out thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:54,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 11:02:22] 2026-02-08 16:01:55,071 | INFO     | [monitor] cgroup control has ended
[2026-02-08 11:02:22] 2026-02-08 16:01:58,609 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 11:02:22] 2026-02-08 16:01:59,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528708716352)>', '<ExcThread(monitor, started 140528402278144)>']
[2026-02-08 11:02:22] 2026-02-08 16:02:04,102 | INFO     | all workflow threads have been joined
[2026-02-08 11:02:22] 2026-02-08 16:02:04,102 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 11:02:22] 2026-02-08 16:02:04,108 | INFO     | traces error code: 0
[2026-02-08 11:02:22] 2026-02-08 16:02:04,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 11:02:22] 2026-02-08 16:02:22,170 | INFO     | PID=20073 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-08 11:02:22] 2026-02-08 16:02:22,170 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 11:02:22] 2026-02-08 16:02:22,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 11:02:22] 2026-02-08 16:02:22,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 11:02:22] 2026-02-08 16:02:22,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 11:02:22] 2026-02-08 16:02:22,171 | INFO     | [monitor] control thread has ended
[2026-02-08 11:02:22] 2026-02-08 16:02:22,261 [wrapper] ==== pilot stdout END ====
[2026-02-08 11:02:22] 2026-02-08 16:02:22,265 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 11:02:22] 2026-02-08 16:02:22,269 [wrapper] pilotpid: 20073
[2026-02-08 11:02:22] 2026-02-08 16:02:22,273 [wrapper] Pilot exit status: 0
[2026-02-08 11:02:22] 2026-02-08 16:02:22,288 [wrapper] pandaids: 7004483354
[2026-02-08 11:02:22] 2026-02-08 16:02:22,328 [wrapper] cleanup supervisor_pilot 17840 20074
[2026-02-08 11:02:22] 2026-02-08 16:02:22,332 [wrapper] Test setup, not cleaning
[2026-02-08 11:02:22] 2026-02-08 16:02:22,335 [wrapper] apfmon messages muted
[2026-02-08 11:02:22] 2026-02-08 16:02:22,339 [wrapper] ==== wrapper stdout END ====
[2026-02-08 11:02:22] 2026-02-08 16:02:22,343 [wrapper] ==== wrapper stderr END ====
[2026-02-08 11:02:22]  *** Error codes and diagnostics ***
[2026-02-08 11:02:22]     "exeErrorCode": 0,
[2026-02-08 11:02:22]     "exeErrorDiag": "",
[2026-02-08 11:02:22]     "pilotErrorCode": 0,
[2026-02-08 11:02:22]     "pilotErrorDiag": "",
[2026-02-08 11:02:22]  *** Listing of results directory ***
[2026-02-08 11:02:22] total 900608
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas    584627 Feb  8 04:40 pilot3.tar.gz
[2026-02-08 11:02:22] -rwx------ 1 boincer umatlas     36322 Feb  8 04:40 runpilot2-wrapper.sh
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas      5111 Feb  8 04:40 queuedata.json
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas       100 Feb  8 09:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 11:02:22] -rwxr-xr-x 1 boincer umatlas      7986 Feb  8 09:22 run_atlas
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas       105 Feb  8 09:22 job.xml
[2026-02-08 11:02:22] -rw-r--r-- 2 boincer umatlas 655919774 Feb  8 09:22 EVNT.48431111._000147.pool.root.1
[2026-02-08 11:02:22] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 09:22 start_atlas.sh
[2026-02-08 11:02:22] drwxrwx--x 2 boincer umatlas      4096 Feb  8 09:22 shared
[2026-02-08 11:02:22] -rw-r--r-- 2 boincer umatlas    597956 Feb  8 09:22 input.tar.gz
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas         0 Feb  8 09:22 boinc_lockfile
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas      2545 Feb  8 09:22 pandaJob.out
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas        57 Feb  8 09:22 setup.sh.local
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas   1009496 Feb  8 09:22 agis_schedconf.cvmfs.json
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas   1513088 Feb  8 09:22 agis_ddmendpoints.agis.ALL.json
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas       432 Feb  8 09:22 workernode_map.json
[2026-02-08 11:02:22] drwx------ 5 boincer umatlas      4096 Feb  8 09:22 pilot3
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas 259792295 Feb  8 11:01 HITS.48431113._007472.pool.root.1
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas       530 Feb  8 11:01 boinc_task_state.xml
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas      1045 Feb  8 11:01 memory_monitor_summary.json
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas    435349 Feb  8 11:01 log.48431113._007472.job.log.tgz.1
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas      6405 Feb  8 11:01 heartbeat.json
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas      5952 Feb  8 11:01 init_data.xml
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas      8192 Feb  8 11:01 boinc_mmap_file
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas        27 Feb  8 11:01 wrapper_checkpoint.txt
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas        95 Feb  8 11:02 pilot_heartbeat.json
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas       745 Feb  8 11:02 pilotlog.txt
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas    849058 Feb  8 11:02 log.48431113._007472.job.log.1
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas       357 Feb  8 11:02 output.list
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas       620 Feb  8 11:02 runtime_log
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas   1300480 Feb  8 11:02 result.tar.gz
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas      9338 Feb  8 11:02 runtime_log.err
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas       658 Feb  8 11:02 4ygMDm4RG98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTJdKDmiZ0fHo.diag
[2026-02-08 11:02:22] -rw-r--r-- 1 boincer umatlas     21457 Feb  8 11:02 stderr.txt
[2026-02-08 11:02:22] HITS file was successfully produced:
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas 259792295 Feb  8 11:01 shared/HITS.pool.root.1
[2026-02-08 11:02:22]  *** Contents of shared directory: ***
[2026-02-08 11:02:22] total 896132
[2026-02-08 11:02:22] -rw-r--r-- 2 boincer umatlas 655919774 Feb  8 09:22 ATLAS.root_0
[2026-02-08 11:02:22] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 09:22 start_atlas.sh
[2026-02-08 11:02:22] -rw-r--r-- 2 boincer umatlas    597956 Feb  8 09:22 input.tar.gz
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas 259792295 Feb  8 11:01 HITS.pool.root.1
[2026-02-08 11:02:22] -rw------- 1 boincer umatlas   1300480 Feb  8 11:02 result.tar.gz
11:02:24 (16373): run_atlas exited; CPU time 64999.826137
11:02:24 (16373): called boinc_finish(0)

</stderr_txt>
]]>

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