Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-08 14:27:42 (16000): vboxwrapper version 26210
2026-02-08 14:27:42 (16000): BOINC client version: 8.2.4
2026-02-08 14:27:42 (16000): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-02-08 14:27:43 (16000): Successfully copied 'init_data.xml' to the shared directory.
2026-02-08 14:27:43 (16000): Create VM. (boinc_e01b6249dd4b00ac, slot#4)
2026-02-08 14:27:44 (16000): Setting Memory Size for VM. (4800MB)
2026-02-08 14:27:44 (16000): Setting CPU Count for VM. (8)
2026-02-08 14:27:44 (16000): Setting Chipset Options for VM.
2026-02-08 14:27:45 (16000): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-08 14:27:45 (16000): Setting Boot Options for VM.
2026-02-08 14:27:45 (16000): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-08 14:27:46 (16000): Enabling VM Network Access.
2026-02-08 14:27:46 (16000): Disabling USB Support for VM.
2026-02-08 14:27:46 (16000): Disabling COM Port Support for VM.
2026-02-08 14:27:46 (16000): Disabling LPT Port Support for VM.
2026-02-08 14:27:47 (16000): Disabling Audio Support for VM.
2026-02-08 14:27:47 (16000): Disabling Clipboard Support for VM.
2026-02-08 14:27:47 (16000): Disabling Drag and Drop Support for VM.
2026-02-08 14:27:47 (16000): Adding storage controller(s) to VM.
2026-02-08 14:27:48 (16000): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-08 14:27:48 (16000): Adding VirtualBox Guest Additions to VM.
2026-02-08 14:27:48 (16000): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-08 14:27:49 (16000): forwarding host port 59927 to guest port 80
2026-02-08 14:27:49 (16000): Enabling remote desktop for VM.
2026-02-08 14:27:49 (16000): Required extension pack not installed, remote desktop not enabled.
2026-02-08 14:27:49 (16000): Enabling shared directory for VM.
2026-02-08 14:27:50 (16000): Starting VM using VBoxManage interface. (boinc_e01b6249dd4b00ac, slot#4)
2026-02-08 14:27:58 (16000): Successfully started VM. (PID = '9424')
2026-02-08 14:27:58 (16000): Reporting VM Process ID to BOINC.
2026-02-08 14:27:58 (16000): Guest Log: BIOS: VirtualBox 7.1.4
2026-02-08 14:27:58 (16000): Guest Log: CPUID EDX: 0x178bfbff
2026-02-08 14:27:58 (16000): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-08 14:27:58 (16000): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-08 14:27:58 (16000): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-08 14:27:58 (16000): Detected: Web Application Enabled (http://localhost:59927)
2026-02-08 14:27:58 (16000): Preference change detected
2026-02-08 14:27:58 (16000): Setting CPU throttle for VM. (100%)
2026-02-08 14:27:58 (16000): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-08 14:28:00 (16000): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-08 14:28:00 (16000): Guest Log: BIOS: Booting from Hard Disk...
2026-02-08 14:28:04 (16000): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-08 14:28:04 (16000): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-08 14:28:04 (16000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-08 14:28:14 (16000): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-08 14:28:14 (16000): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-08 14:28:30 (16000): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-08 14:28:30 (16000): Guest Log: 00:00:00.000310 main     Log opened 2026-02-08T14:28:28.256612000Z
2026-02-08 14:28:30 (16000): Guest Log: 00:00:00.000515 main     OS Product: Linux
2026-02-08 14:28:30 (16000): Guest Log: 00:00:00.000596 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-08 14:28:30 (16000): Guest Log: 00:00:00.000666 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-08 14:28:30 (16000): Guest Log: 00:00:00.000737 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-08 14:28:30 (16000): Guest Log: 00:00:00.000739 main     Process ID: 1381
2026-02-08 14:28:30 (16000): Guest Log: 00:00:00.000741 main     Package type: LINUX_64BITS_GENERIC
2026-02-08 14:28:30 (16000): Guest Log: 00:00:00.003127 main     5.2.32 r132073 started. Verbose level = 0
2026-02-08 14:28:30 (16000): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-08 14:28:30 (16000): Guest Log: [INFO] Mounting shared directory
2026-02-08 14:28:30 (16000): Guest Log: [INFO] Checking for init_data.xml
2026-02-08 14:28:40 (16000): Guest Log: 00:00:10.012159 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 947 834 000ns (GuestNow=1 770 557 319 314 766 000 ns GuestLast=1 770 560 908 262 600 000 ns fSetTimeLastLoop=true )
2026-02-08 14:28:46 (16000): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-08 14:28:46 (16000): Guest Log: [INFO] Detected branch: prod
2026-02-08 14:28:48 (16000): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-08 14:28:48 (16000): Guest Log: Copying input files
2026-02-08 14:28:53 (16000): Guest Log: Copied input files into RunAtlas.
2026-02-08 14:28:54 (16000): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-08 14:28:54 (16000): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-08 14:28:54 (16000): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-08 14:28:54 (16000): Guest Log: Further information can be found at the LHC@home message board.
2026-02-08 14:29:05 (16000): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-08 14:29:05 (16000): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-08 14:29:05 (16000): Guest Log: 2.6.3.0 1660 0 32212 156021 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-08 14:29:07 (16000): Guest Log: copied the webapp to /var/www
2026-02-08 14:29:07 (16000): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-08 14:29:07 (16000): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-08 14:29:07 (16000): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-08 14:29:07 (16000): Guest Log:  *** Starting ATLAS job. (PandaID=7003945841 taskID=48318018) ***
2026-02-08 16:08:03 (16000): Status Report: Elapsed Time: '6000.000000'
2026-02-08 16:08:03 (16000): Status Report: CPU Time: '35934.718750'
2026-02-08 17:48:09 (16000): Status Report: Elapsed Time: '12000.000000'
2026-02-08 17:48:09 (16000): Status Report: CPU Time: '81299.265625'
2026-02-08 19:28:14 (16000): Status Report: Elapsed Time: '18000.000000'
2026-02-08 19:28:14 (16000): Status Report: CPU Time: '126741.265625'
2026-02-08 20:01:57 (16000): Guest Log:  *** Job finished ***
2026-02-08 20:01:57 (16000): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:36,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:36,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:49,225 | INFO     | [monitor] cgroup control has ended
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:49,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140105355671360)>', '<ExcThread(monitor, started 140104114894592)>']
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:50,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:50,379 | INFO     | [monitor] control thread has ended
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:54,941 | INFO     | all workflow threads have been joined
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:54,941 | INFO     | end of generic workflow (traces error code: 0)
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:54,941 | INFO     | traces error code: 0
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:54,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:55,126 [wrapper] ==== pilot stdout END ====
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:55,137 [wrapper] ==== wrapper stdout RESUME ====
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:55,148 [wrapper] pilotpid: 6098
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:55,158 [wrapper] Pilot exit status: 0
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:55,309 [wrapper] pandaids: 7003945841
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:55,389 [wrapper] cleanup supervisor_pilot 30233 6099
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:55,400 [wrapper] Test setup, not cleaning
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:55,411 [wrapper] apfmon messages muted
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:55,419 [wrapper] ==== wrapper stdout END ====
2026-02-08 20:01:57 (16000): Guest Log: 2026-02-08 19:01:55,428 [wrapper] ==== wrapper stderr END ====
2026-02-08 20:01:57 (16000): Guest Log:  *** Error codes and diagnostics ***
2026-02-08 20:01:57 (16000): Guest Log:     "exeErrorCode": 0,
2026-02-08 20:01:57 (16000): Guest Log:     "exeErrorDiag": "",
2026-02-08 20:01:57 (16000): Guest Log:     "pilotErrorCode": 0,
2026-02-08 20:01:57 (16000): Guest Log:     "pilotErrorDiag": "",
2026-02-08 20:01:57 (16000): Guest Log:  *** Listing of results directory ***
2026-02-08 20:01:57 (16000): Guest Log: total 192612
2026-02-08 20:01:57 (16000): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  8 05:10 pilot3.tar.gz
2026-02-08 20:01:57 (16000): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  8 05:13 runpilot2-wrapper.sh
2026-02-08 20:01:57 (16000): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  8 05:15 queuedata.json
2026-02-08 20:01:57 (16000): Guest Log: -rwxr-xr-x. 1 atlas atlas      5954 Feb  8 13:28 init_data.xml
2026-02-08 20:01:57 (16000): Guest Log: -rwxr-xr-x. 1 atlas atlas    597946 Feb  8 13:28 input.tar.gz
2026-02-08 20:01:57 (16000): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  8 13:28 start_atlas.sh
2026-02-08 20:01:57 (16000): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  8 13:28 EVNT.48318016._000066.pool.root.1 -> /data/./ATLAS.root_0
2026-02-08 20:01:57 (16000): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Feb  8 13:29 pandaJob.out
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas   1009526 Feb  8 13:30 agis_schedconf.cvmfs.json
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas       422 Feb  8 13:30 workernode_map.json
2026-02-08 20:01:57 (16000): Guest Log: drwx------. 5 atlas atlas      4096 Feb  8 13:30 pilot3
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas 186810638 Feb  8 18:59 HITS.48318018._003381.pool.root.1
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas        95 Feb  8 19:00 pilot_heartbeat.json
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas      1031 Feb  8 19:00 memory_monitor_summary.json
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas   1513088 Feb  8 19:01 agis_ddmendpoints.agis.ALL.json
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas    574939 Feb  8 19:01 log.48318018._003381.job.log.tgz.1
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas      6349 Feb  8 19:01 heartbeat.json
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas      4804 Feb  8 19:01 pilotlog.txt
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas   2703279 Feb  8 19:01 log.48318018._003381.job.log.1
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas       357 Feb  8 19:01 output.list
2026-02-08 20:01:57 (16000): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  8 19:01 runtime_log
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas   3297280 Feb  8 19:01 result.tar.gz
2026-02-08 20:01:57 (16000): Guest Log: -rw-r--r--. 1 atlas atlas      8802 Feb  8 19:01 runtime_log.err
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas       678 Feb  8 19:01 cAWNDmUIC98n9Rq4apOajLDm4fhM0noT9bVooX4SDmwXcKDmdIYo6n.diag
2026-02-08 20:01:57 (16000): Guest Log: Looking for outputfile HITS.48318018._003381.pool.root.1
2026-02-08 20:01:57 (16000): Guest Log: HITS file was successfully produced
2026-02-08 20:01:57 (16000): Guest Log: -rw-------. 1 atlas atlas 186810638 Feb  8 18:59 /home/atlas/RunAtlas/HITS.48318018._003381.pool.root.1
2026-02-08 20:01:59 (16000): Guest Log: Successfully finished the ATLAS job!
2026-02-08 20:01:59 (16000): Guest Log: Copying the results back to the shared directory!
2026-02-08 20:02:00 (16000): Guest Log:  *** Contents of shared directory: ***
2026-02-08 20:02:00 (16000): Guest Log: total 668388
2026-02-08 20:02:00 (16000): Guest Log: -rwxrwxrwx. 1 root root 493693502 Feb  8 13:27 ATLAS.root_0
2026-02-08 20:02:00 (16000): Guest Log: -rwxrwxrwx. 1 root root 186810638 Feb  8 19:01 HITS.pool.root.1
2026-02-08 20:02:00 (16000): Guest Log: -rwxrwxrwx. 1 root root      5954 Feb  8 13:27 init_data.xml
2026-02-08 20:02:00 (16000): Guest Log: -rwxrwxrwx. 1 root root    597946 Feb  8 13:05 input.tar.gz
2026-02-08 20:02:00 (16000): Guest Log: -rwxrwxrwx. 1 root root   3297280 Feb  8 19:01 result.tar.gz
2026-02-08 20:02:00 (16000): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  8 13:05 start_atlas.sh
2026-02-08 20:02:00 (16000): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-08 20:02:00 (16000): VM Completion File Detected.
2026-02-08 20:02:00 (16000): Powering off VM.
2026-02-08 20:02:01 (16000): Successfully stopped VM.
2026-02-08 20:02:01 (16000): Deregistering VM. (boinc_e01b6249dd4b00ac, slot#4)
2026-02-08 20:02:01 (16000): Removing network bandwidth throttle group from VM.
2026-02-08 20:02:01 (16000): Removing VM from VirtualBox.
2026-02-08 20:02:07 (16000): called boinc_finish(0)

</stderr_txt>
]]>

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