Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
04:11:02 (2213372): wrapper (7.7.26015): starting
04:11:02 (2213372): wrapper: running run_atlas (--nthreads 12)
[2026-02-09 04:11:02] Arguments: --nthreads 12
[2026-02-09 04:11:02] Threads: 12
[2026-02-09 04:11:02] Checking for CVMFS
[2026-02-09 04:11:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 04:11:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 04:11:06] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 04:11:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 04:11:06] 2.13.0.0 2213580 0 29964 156041 3 1 3540712 6144001 0 130560 0 0 0.000 1336 1539 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-09 04:11:06] CVMFS is ok
[2026-02-09 04:11:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 04:11:06] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-09 04:11:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-09 04:11:06] Further information can be found at the LHC@home message board.
[2026-02-09 04:11:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 04:11:06] Checking for apptainer binary...
[2026-02-09 04:11:06] apptainer is not installed, using version from CVMFS
[2026-02-09 04:11:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 04:11:06] Debian-bookworm-latest-amd64-base
[2026-02-09 04:11:06] apptainer works
[2026-02-09 04:11:06] Set ATHENA_PROC_NUMBER=12
[2026-02-09 04:11:06] Set ATHENA_CORE_NUMBER=12
[2026-02-09 04:11:06] Starting ATLAS job with PandaID=7004477166
[2026-02-09 04:11:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 04:56:37]  *** The last 200 lines of the pilot log: ***
[2026-02-09 04:56:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-09 04:56:37]  is_altstaged=None
[2026-02-09 04:56:37]  is_tar=False
[2026-02-09 04:56:37]  lfn=log.48442031._005715.job.log.tgz.1
[2026-02-09 04:56:37]  mtime=0
[2026-02-09 04:56:37]  protocol_id=None
[2026-02-09 04:56:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-09 04:56:37]  replicas=None
[2026-02-09 04:56:37]  scope=mc23_13p6TeV
[2026-02-09 04:56:37]  status=None
[2026-02-09 04:56:37]  status_code=0
[2026-02-09 04:56:37]  storage_token=
[2026-02-09 04:56:37]  surl=/var/lib/boinc-client/slots/12/PanDA_Pilot-7004477166/log.48442031._005715.job.log.tgz.1
[2026-02-09 04:56:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/e8/log.48442031._005715.job.log.tgz.1
[2026-02-09 04:56:37]  workdir=None
[2026-02-09 04:56:37] ]
[2026-02-09 04:56:37] 2026-02-09 03:55:51,010 | INFO     | transferring file log.48442031._005715.job.log.tgz.1 from /var/lib/boinc-client/slots/12/PanDA_Pilot-7004477166/log.48442031._005715.job.log.tgz.1 to /var/lib/boin
[2026-02-09 04:56:37] 2026-02-09 03:55:51,011 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/12/PanDA_Pilot-7004477166/log.48442031._005715.job.log.tgz.1 /var/lib/boinc-client/slots/12/log.4844
[2026-02-09 04:56:37] 2026-02-09 03:55:51,030 | INFO     | adding to output.list: log.48442031._005715.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/e8/log.48442031._005715.job.log.tg
[2026-02-09 04:56:37] 2026-02-09 03:55:51,030 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-09 04:56:37] 2026-02-09 03:55:51,030 | INFO     | summary of transferred files:
[2026-02-09 04:56:37] 2026-02-09 03:55:51,030 | INFO     |  -- lfn=log.48442031._005715.job.log.tgz.1, status_code=0, status=transferred
[2026-02-09 04:56:37] 2026-02-09 03:55:51,030 | INFO     | stage-out finished correctly
[2026-02-09 04:56:37] 2026-02-09 03:55:52,857 | INFO     | time since job start (2664s) is within the limit (349056.0s)
[2026-02-09 04:56:37] 2026-02-09 03:55:53,931 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-09 04:56:37] 2026-02-09 03:55:54,860 | INFO     | time since job start (2666s) is within the limit (349056.0s)
[2026-02-09 04:56:37] 2026-02-09 03:55:55,624 | INFO     | job 7004477166 has state=finished
[2026-02-09 04:56:37] 2026-02-09 03:55:55,624 | INFO     | preparing for final server update for job 7004477166 in state='finished'
[2026-02-09 04:56:37] 2026-02-09 03:55:55,624 | INFO     | reading metadata from: /var/lib/boinc-client/slots/12/PanDA_Pilot-7004477166/jobReport.json
[2026-02-09 04:56:37] 2026-02-09 03:55:55,626 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/12/workernode_map.json
[2026-02-09 04:56:37] 2026-02-09 03:55:55,627 | INFO     | this job has now completed (state=finished)
[2026-02-09 04:56:37] 2026-02-09 03:55:55,627 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 04:56:37] 2026-02-09 03:55:55,627 | INFO     | log transfer has been attempted: DONE
[2026-02-09 04:56:37] 2026-02-09 03:55:55,627 | INFO     | job 7004477166 has finished - writing final server update
[2026-02-09 04:56:37] 2026-02-09 03:55:55,627 | INFO     | total number of processed events: 400 (read)
[2026-02-09 04:56:37] 2026-02-09 03:55:55,631 | INFO     | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-7004477166/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 04:56:37] 2026-02-09 03:55:55,631 | INFO     | extracted standard info from prmon json
[2026-02-09 04:56:37] 2026-02-09 03:55:55,631 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 04:56:37] 2026-02-09 03:55:55,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 04:56:37] 2026-02-09 03:55:55,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 04:56:37] 2026-02-09 03:55:55,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 04:56:37] 2026-02-09 03:55:55,632 | INFO     | fitting pss+swap vs Time
[2026-02-09 04:56:37] 2026-02-09 03:55:55,633 | INFO     | sum of square deviations: 15695178.0
[2026-02-09 04:56:37] 2026-02-09 03:55:55,633 | INFO     | sum of deviations: -973790762.9999999
[2026-02-09 04:56:37] 2026-02-09 03:55:55,633 | INFO     | mean x: 1770608112.0
[2026-02-09 04:56:37] 2026-02-09 03:55:55,633 | INFO     | mean y: 2776104.756756757
[2026-02-09 04:56:37] 2026-02-09 03:55:55,633 | INFO     | intersect: 109858288693.30269
[2026-02-09 04:56:37] 2026-02-09 03:55:55,633 | INFO     | chi2: 0.04333433862584559
[2026-02-09 04:56:37] 2026-02-09 03:55:55,633 | INFO     | current memory leak: -62.04 B/s (using 37 data points, chi2=0.04)
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | could have reported an average CPU frequency of 3825 MHz (5 samples)
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | ..............................
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | . Timing measurements:
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | . get job = 0 s
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | . initial setup = 5 s
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | . payload setup = 5 s
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | . stage-in = 0 s
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | . payload execution = 2642 s
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | . stage-out = 0 s
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | . log creation = 0 s
[2026-02-09 04:56:37] 2026-02-09 03:55:55,634 | INFO     | ..............................
[2026-02-09 04:56:37] 2026-02-09 03:55:55,715 | INFO     | 
[2026-02-09 04:56:37] 2026-02-09 03:55:55,715 | INFO     | job summary report
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | --------------------------------------------------
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | PanDA job id: 7004477166
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | task id: 48442031
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | errors: (none)
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | pilot state: finished 
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | transexitcode: 0
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | exeerrorcode: 0
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | exeerrordiag: 
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | exitcode: 0
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | exitmsg: OK
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | cpuconsumptiontime: 28857 s
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | nevents: 400
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | neventsw: 0
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | pid: 2222510
[2026-02-09 04:56:37] 2026-02-09 03:55:55,716 | INFO     | pgrp: 2222510
[2026-02-09 04:56:37] 2026-02-09 03:55:55,717 | INFO     | corecount: 12
[2026-02-09 04:56:37] 2026-02-09 03:55:55,717 | INFO     | event service: False
[2026-02-09 04:56:37] 2026-02-09 03:55:55,717 | INFO     | sizes: {0: 2282789, 1: 2283079, 11: 2283079, 2651: 2308441, 2652: 2317455, 2655: 2317511, 2656: 2317865}
[2026-02-09 04:56:37] 2026-02-09 03:55:55,717 | INFO     | --------------------------------------------------
[2026-02-09 04:56:37] 2026-02-09 03:55:55,717 | INFO     | 
[2026-02-09 04:56:37] 2026-02-09 03:55:55,717 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/12
[2026-02-09 04:56:37] 2026-02-09 03:55:55,732 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 04:56:37] 2026-02-09 03:55:55,733 | INFO     | job 7004477166 has completed (purged errors)
[2026-02-09 04:56:37] 2026-02-09 03:55:55,734 | INFO     | overall cleanup function is called
[2026-02-09 04:56:37] 2026-02-09 03:55:56,740 | INFO     | --- collectZombieJob: --- 10, [2222510]
[2026-02-09 04:56:37] 2026-02-09 03:55:56,741 | INFO     | zombie collector waiting for pid 2222510
[2026-02-09 04:56:37] 2026-02-09 03:55:56,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 04:56:37] 2026-02-09 03:55:56,741 | INFO     | collected zombie processes
[2026-02-09 04:56:37] 2026-02-09 03:55:56,741 | INFO     | will attempt to kill all subprocesses of pid=2222510
[2026-02-09 04:56:37] 2026-02-09 03:55:56,802 | INFO     | process IDs to be killed: [2222510] (in reverse order)
[2026-02-09 04:56:37] 2026-02-09 03:55:56,827 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 04:56:37] 2026-02-09 03:55:56,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 04:56:37] 2026-02-09 03:55:56,829 | INFO     | did not find any defunct processes belonging to 2222510
[2026-02-09 04:56:37] 2026-02-09 03:55:56,830 | INFO     | did not find any defunct processes belonging to 2222510
[2026-02-09 04:56:37] 2026-02-09 03:55:56,830 | INFO     | ready for new job
[2026-02-09 04:56:37] 2026-02-09 03:55:56,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 04:56:37] 2026-02-09 03:55:56,830 | INFO     | **************************************
[2026-02-09 04:56:37] 2026-02-09 03:55:56,831 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 04:56:37] 2026-02-09 03:55:56,831 | INFO     | **************************************
[2026-02-09 04:56:37] 2026-02-09 03:55:56,831 | INFO     | 
[2026-02-09 04:56:37] 2026-02-09 03:55:56,831 | INFO     | architecture information:
[2026-02-09 04:56:37] 2026-02-09 03:55:56,831 | INFO     | executing command: cat /etc/os-release
[2026-02-09 04:56:37] 2026-02-09 03:55:56,840 | INFO     | cat /etc/os-release:
[2026-02-09 04:56:37] NAME="CentOS Linux"
[2026-02-09 04:56:37] VERSION="7 (Core)"
[2026-02-09 04:56:37] ID="centos"
[2026-02-09 04:56:37] ID_LIKE="rhel fedora"
[2026-02-09 04:56:37] VERSION_ID="7"
[2026-02-09 04:56:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 04:56:37] ANSI_COLOR="0;31"
[2026-02-09 04:56:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 04:56:37] HOME_URL="https://www.centos.org/"
[2026-02-09 04:56:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 04:56:37] 
[2026-02-09 04:56:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 04:56:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 04:56:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 04:56:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 04:56:37] 
[2026-02-09 04:56:37] 2026-02-09 03:55:56,840 | INFO     | **************************************
[2026-02-09 04:56:37] 2026-02-09 03:55:57,343 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/12
[2026-02-09 04:56:37] 2026-02-09 03:55:57,356 | INFO     | sufficient remaining disk space (696152752128 B)
[2026-02-09 04:56:37] 2026-02-09 03:55:57,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 04:56:37] 2026-02-09 03:55:57,356 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 04:56:37] 2026-02-09 03:55:57,356 | INFO     | update_server=False
[2026-02-09 04:56:37] 2026-02-09 03:55:57,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 04:56:37] 2026-02-09 03:55:57,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 04:56:37] 2026-02-09 03:55:57,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 04:56:37] 2026-02-09 03:55:57,365 | INFO     | all payload control threads have been joined
[2026-02-09 04:56:37] 2026-02-09 03:55:57,437 | INFO     | all job control threads have been joined
[2026-02-09 04:56:37] 2026-02-09 03:55:57,502 | WARNING  | process 2222510 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 04:56:37] 2026-02-09 03:55:57,528 | INFO     | using path: /var/lib/boinc-client/slots/12/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 04:56:37] 2026-02-09 03:55:57,560 | INFO     | number of running child processes to parent process 2222510: 1
[2026-02-09 04:56:37] 2026-02-09 03:55:57,560 | INFO     | maximum number of monitored processes: 6
[2026-02-09 04:56:37] 2026-02-09 03:55:57,560 | INFO     | aborting job monitoring since job object (job id=7004477166) has expired
[2026-02-09 04:56:37] 2026-02-09 03:55:57,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 04:56:37] 2026-02-09 03:55:57,560 | INFO     | will abort loop
[2026-02-09 04:56:37] 2026-02-09 03:55:58,278 | INFO     | all data control threads have been joined
[2026-02-09 04:56:37] 2026-02-09 03:55:58,361 | INFO     | [job] retrieve thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:58,362 | INFO     | [job] queue monitor thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:58,371 | INFO     | [payload] control thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:58,383 | INFO     | [data] copytool_in thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:58,441 | INFO     | [job] control thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:58,497 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:58,565 | INFO     | [job] job monitor thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:58,704 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:59,005 | INFO     | [job] validate thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:59,138 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:59,256 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:59,290 | INFO     | [data] control thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:59,362 | INFO     | [data] copytool_out thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:59,453 | INFO     | [payload] failed_post thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:59,673 | INFO     | [payload] validate_post thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:55:59,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 04:56:37] 2026-02-09 03:56:03,997 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 04:56:37] 2026-02-09 03:56:22,225 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-02-09 04:56:37] 2026-02-09 03:56:27,967 | INFO     | PID=2217795 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 04:56:37] 2026-02-09 03:56:27,967 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 04:56:37] 2026-02-09 03:56:27,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 04:56:37] 2026-02-09 03:56:27,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 04:56:37] 2026-02-09 03:56:32,328 | INFO     | [monitor] cgroup control has ended
[2026-02-09 04:56:37] 2026-02-09 03:56:32,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962815289152)>', '<ExcThread(monitor, started 139962263508736)>']
[2026-02-09 04:56:37] 2026-02-09 03:56:32,990 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 04:56:37] 2026-02-09 03:56:32,990 | INFO     | [monitor] control thread has ended
[2026-02-09 04:56:37] 2026-02-09 03:56:37,499 | INFO     | all workflow threads have been joined
[2026-02-09 04:56:37] 2026-02-09 03:56:37,499 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 04:56:37] 2026-02-09 03:56:37,511 | INFO     | traces error code: 0
[2026-02-09 04:56:37] 2026-02-09 03:56:37,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 04:56:37] 2026-02-09 03:56:37,582 [wrapper] ==== pilot stdout END ====
[2026-02-09 04:56:37] 2026-02-09 03:56:37,584 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 04:56:37] 2026-02-09 03:56:37,585 [wrapper] pilotpid: 2217795
[2026-02-09 04:56:37] 2026-02-09 03:56:37,587 [wrapper] Pilot exit status: 0
[2026-02-09 04:56:37] 2026-02-09 03:56:37,592 [wrapper] pandaids: 7004477166
[2026-02-09 04:56:37] 2026-02-09 03:56:37,606 [wrapper] cleanup supervisor_pilot 2228190 2217796
[2026-02-09 04:56:37] 2026-02-09 03:56:37,607 [wrapper] Test setup, not cleaning
[2026-02-09 04:56:37] 2026-02-09 03:56:37,609 [wrapper] apfmon messages muted
[2026-02-09 04:56:37] 2026-02-09 03:56:37,610 [wrapper] ==== wrapper stdout END ====
[2026-02-09 04:56:37] 2026-02-09 03:56:37,611 [wrapper] ==== wrapper stderr END ====
[2026-02-09 04:56:37]  *** Error codes and diagnostics ***
[2026-02-09 04:56:37]     "exeErrorCode": 0,
[2026-02-09 04:56:37]     "exeErrorDiag": "",
[2026-02-09 04:56:37]     "pilotErrorCode": 0,
[2026-02-09 04:56:37]     "pilotErrorDiag": "",
[2026-02-09 04:56:37]  *** Listing of results directory ***
[2026-02-09 04:56:37] total 673500
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc    584627 Feb  8 08:08 pilot3.tar.gz
[2026-02-09 04:56:37] -rwx------ 1 boinc boinc     36322 Feb  8 08:08 runpilot2-wrapper.sh
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc      5111 Feb  8 08:10 queuedata.json
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc       100 Feb  9 04:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 04:56:37] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 04:11 run_atlas
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc       105 Feb  9 04:11 job.xml
[2026-02-09 04:56:37] -rw-r--r-- 2 boinc boinc     15845 Feb  9 04:11 start_atlas.sh
[2026-02-09 04:56:37] drwxrwx--x 2 boinc boinc      4096 Feb  9 04:11 shared
[2026-02-09 04:56:37] -rw-r--r-- 2 boinc boinc    597955 Feb  9 04:11 input.tar.gz
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc      6728 Feb  9 04:11 init_data.xml
[2026-02-09 04:56:37] -rw-r--r-- 2 boinc boinc 499683789 Feb  9 04:11 EVNT.48442027._000173.pool.root.1
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc         0 Feb  9 04:11 boinc_lockfile
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc      2528 Feb  9 04:11 pandaJob.out
[2026-02-09 04:56:37] -rw------- 1 boinc boinc   1009504 Feb  9 04:11 agis_schedconf.cvmfs.json
[2026-02-09 04:56:37] -rw------- 1 boinc boinc   1513088 Feb  9 04:11 agis_ddmendpoints.agis.ALL.json
[2026-02-09 04:56:37] -rw------- 1 boinc boinc       440 Feb  9 04:11 workernode_map.json
[2026-02-09 04:56:37] drwx------ 5 boinc boinc      4096 Feb  9 04:11 pilot3
[2026-02-09 04:56:37] -rw------- 1 boinc boinc 184455709 Feb  9 04:55 HITS.48442031._005715.pool.root.1
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc       530 Feb  9 04:55 boinc_task_state.xml
[2026-02-09 04:56:37] -rw------- 1 boinc boinc        95 Feb  9 04:55 pilot_heartbeat.json
[2026-02-09 04:56:37] -rw------- 1 boinc boinc      1009 Feb  9 04:55 memory_monitor_summary.json
[2026-02-09 04:56:37] -rw------- 1 boinc boinc    372355 Feb  9 04:55 log.48442031._005715.job.log.tgz.1
[2026-02-09 04:56:37] -rw------- 1 boinc boinc      6338 Feb  9 04:55 heartbeat.json
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc        27 Feb  9 04:56 wrapper_checkpoint.txt
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc      8192 Feb  9 04:56 boinc_mmap_file
[2026-02-09 04:56:37] -rw------- 1 boinc boinc      5282 Feb  9 04:56 pilotlog.txt
[2026-02-09 04:56:37] -rw------- 1 boinc boinc    415808 Feb  9 04:56 log.48442031._005715.job.log.1
[2026-02-09 04:56:37] -rw------- 1 boinc boinc       357 Feb  9 04:56 output.list
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc       620 Feb  9 04:56 runtime_log
[2026-02-09 04:56:37] -rw------- 1 boinc boinc    808960 Feb  9 04:56 result.tar.gz
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc      9147 Feb  9 04:56 runtime_log.err
[2026-02-09 04:56:37] -rw------- 1 boinc boinc       706 Feb  9 04:56 k4vLDmG5D98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZDdKDmgPRpHn.diag
[2026-02-09 04:56:37] -rw-r--r-- 1 boinc boinc     21611 Feb  9 04:56 stderr.txt
[2026-02-09 04:56:37] HITS file was successfully produced:
[2026-02-09 04:56:37] -rw------- 1 boinc boinc 184455709 Feb  9 04:55 shared/HITS.pool.root.1
[2026-02-09 04:56:37]  *** Contents of shared directory: ***
[2026-02-09 04:56:37] total 669512
[2026-02-09 04:56:37] -rw-r--r-- 2 boinc boinc     15845 Feb  9 04:11 start_atlas.sh
[2026-02-09 04:56:37] -rw-r--r-- 2 boinc boinc    597955 Feb  9 04:11 input.tar.gz
[2026-02-09 04:56:37] -rw-r--r-- 2 boinc boinc 499683789 Feb  9 04:11 ATLAS.root_0
[2026-02-09 04:56:37] -rw------- 1 boinc boinc 184455709 Feb  9 04:55 HITS.pool.root.1
[2026-02-09 04:56:37] -rw------- 1 boinc boinc    808960 Feb  9 04:56 result.tar.gz
04:56:39 (2213372): run_atlas exited; CPU time 28872.729949
04:56:39 (2213372): called boinc_finish(0)

</stderr_txt>
]]>

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