Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
04:56:43 (2228269): wrapper (7.7.26015): starting
04:56:43 (2228269): wrapper: running run_atlas (--nthreads 12)
[2026-02-09 04:56:43] Arguments: --nthreads 12
[2026-02-09 04:56:43] Threads: 12
[2026-02-09 04:56:43] Checking for CVMFS
[2026-02-09 04:56:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 04:56:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 04:56:44] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 04:56:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 04:56:44] 2.13.0.0 2213580 45 53384 156042 2 50 3553086 6144000 0 130560 0 44498 99.963 4222 1014 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-09 04:56:44] CVMFS is ok
[2026-02-09 04:56:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 04:56:44] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-09 04:56:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-09 04:56:44] Further information can be found at the LHC@home message board.
[2026-02-09 04:56:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 04:56:44] Checking for apptainer binary...
[2026-02-09 04:56:44] apptainer is not installed, using version from CVMFS
[2026-02-09 04:56:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 04:56:44] Debian-bookworm-latest-amd64-base
[2026-02-09 04:56:44] apptainer works
[2026-02-09 04:56:44] Set ATHENA_PROC_NUMBER=12
[2026-02-09 04:56:44] Set ATHENA_CORE_NUMBER=12
[2026-02-09 04:56:44] Starting ATLAS job with PandaID=7004226071
[2026-02-09 04:56:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 05:42:05]  *** The last 200 lines of the pilot log: ***
[2026-02-09 05:42:05]  filetype=log
[2026-02-09 05:42:05]  guid=ae80ccae-0a81-4d41-8cd3-8ddf8b5c1ef0
[2026-02-09 05:42:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-09 05:42:05]  is_altstaged=None
[2026-02-09 05:42:05]  is_tar=False
[2026-02-09 05:42:05]  lfn=log.48442031._005144.job.log.tgz.1
[2026-02-09 05:42:05]  mtime=0
[2026-02-09 05:42:05]  protocol_id=None
[2026-02-09 05:42:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-09 05:42:05]  replicas=None
[2026-02-09 05:42:05]  scope=mc23_13p6TeV
[2026-02-09 05:42:05]  status=None
[2026-02-09 05:42:05]  status_code=0
[2026-02-09 05:42:05]  storage_token=
[2026-02-09 05:42:05]  surl=/var/lib/boinc-client/slots/11/PanDA_Pilot-7004226071/log.48442031._005144.job.log.tgz.1
[2026-02-09 05:42:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/90/log.48442031._005144.job.log.tgz.1
[2026-02-09 05:42:05]  workdir=None
[2026-02-09 05:42:05] ]
[2026-02-09 05:42:05] 2026-02-09 04:40:58,110 | INFO     | transferring file log.48442031._005144.job.log.tgz.1 from /var/lib/boinc-client/slots/11/PanDA_Pilot-7004226071/log.48442031._005144.job.log.tgz.1 to /var/lib/boin
[2026-02-09 05:42:05] 2026-02-09 04:40:58,110 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/11/PanDA_Pilot-7004226071/log.48442031._005144.job.log.tgz.1 /var/lib/boinc-client/slots/11/log.4844
[2026-02-09 05:42:05] 2026-02-09 04:40:58,122 | INFO     | adding to output.list: log.48442031._005144.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/90/log.48442031._005144.job.log.tg
[2026-02-09 05:42:05] 2026-02-09 04:40:58,123 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-09 05:42:05] 2026-02-09 04:40:58,123 | INFO     | summary of transferred files:
[2026-02-09 05:42:05] 2026-02-09 04:40:58,123 | INFO     |  -- lfn=log.48442031._005144.job.log.tgz.1, status_code=0, status=transferred
[2026-02-09 05:42:05] 2026-02-09 04:40:58,123 | INFO     | stage-out finished correctly
[2026-02-09 05:42:05] 2026-02-09 04:40:58,675 | INFO     | time since job start (2643s) is within the limit (349056.0s)
[2026-02-09 05:42:05] 2026-02-09 04:40:58,856 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-09 05:42:05] 2026-02-09 04:40:58,932 | INFO     | job 7004226071 has state=finished
[2026-02-09 05:42:05] 2026-02-09 04:40:58,933 | INFO     | preparing for final server update for job 7004226071 in state='finished'
[2026-02-09 05:42:05] 2026-02-09 04:40:59,769 | INFO     | monitor loop #205: job 0:7004226071 is in state 'finished'
[2026-02-09 05:42:05] 2026-02-09 04:40:59,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,790 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,790 | INFO     | reading metadata from: /var/lib/boinc-client/slots/11/PanDA_Pilot-7004226071/jobReport.json
[2026-02-09 05:42:05] 2026-02-09 04:40:59,792 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/11/workernode_map.json
[2026-02-09 05:42:05] 2026-02-09 04:40:59,792 | INFO     | this job has now completed (state=finished)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,792 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,792 | INFO     | log transfer has been attempted: DONE
[2026-02-09 05:42:05] 2026-02-09 04:40:59,793 | INFO     | job 7004226071 has finished - writing final server update
[2026-02-09 05:42:05] 2026-02-09 04:40:59,793 | INFO     | total number of processed events: 400 (read)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,796 | INFO     | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-7004226071/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,796 | INFO     | extracted standard info from prmon json
[2026-02-09 05:42:05] 2026-02-09 04:40:59,797 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 05:42:05] 2026-02-09 04:40:59,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 05:42:05] 2026-02-09 04:40:59,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 05:42:05] 2026-02-09 04:40:59,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 05:42:05] 2026-02-09 04:40:59,798 | INFO     | fitting pss+swap vs Time
[2026-02-09 05:42:05] 2026-02-09 04:40:59,798 | INFO     | sum of square deviations: 14456085.0
[2026-02-09 05:42:05] 2026-02-09 04:40:59,798 | INFO     | sum of deviations: -2800933858.5000005
[2026-02-09 05:42:05] 2026-02-09 04:40:59,798 | INFO     | mean x: 1770610804.5
[2026-02-09 05:42:05] 2026-02-09 04:40:59,798 | INFO     | mean y: 2843037.0833333335
[2026-02-09 05:42:05] 2026-02-09 04:40:59,798 | INFO     | intersect: 343066940443.122
[2026-02-09 05:42:05] 2026-02-09 04:40:59,798 | INFO     | chi2: 0.062155800223544215
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | current memory leak: -193.75 B/s (using 36 data points, chi2=0.06)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | could have reported an average CPU frequency of 3936 MHz (5 samples)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | ..............................
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | . Timing measurements:
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | . get job = 0 s
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | . initial setup = 3 s
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | . payload setup = 2 s
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | . stage-in = 0 s
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | . payload execution = 2624 s
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | . stage-out = 0 s
[2026-02-09 05:42:05] 2026-02-09 04:40:59,799 | INFO     | . log creation = 0 s
[2026-02-09 05:42:05] 2026-02-09 04:40:59,800 | INFO     | ..............................
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | 
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | job summary report
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | --------------------------------------------------
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | PanDA job id: 7004226071
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | task id: 48442031
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | errors: (none)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | pilot state: finished 
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | transexitcode: 0
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | exeerrorcode: 0
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | exeerrordiag: 
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | exitcode: 0
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | exitmsg: OK
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | cpuconsumptiontime: 28397 s
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | nevents: 400
[2026-02-09 05:42:05] 2026-02-09 04:40:59,866 | INFO     | neventsw: 0
[2026-02-09 05:42:05] 2026-02-09 04:40:59,867 | INFO     | pid: 2237124
[2026-02-09 05:42:05] 2026-02-09 04:40:59,867 | INFO     | pgrp: 2237124
[2026-02-09 05:42:05] 2026-02-09 04:40:59,867 | INFO     | corecount: 12
[2026-02-09 05:42:05] 2026-02-09 04:40:59,867 | INFO     | event service: False
[2026-02-09 05:42:05] 2026-02-09 04:40:59,867 | INFO     | sizes: {0: 2282618, 1: 2283079, 11: 2283079, 2631: 2308441, 2632: 2317455, 2633: 2317865}
[2026-02-09 05:42:05] 2026-02-09 04:40:59,867 | INFO     | --------------------------------------------------
[2026-02-09 05:42:05] 2026-02-09 04:40:59,867 | INFO     | 
[2026-02-09 05:42:05] 2026-02-09 04:40:59,867 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11
[2026-02-09 05:42:05] 2026-02-09 04:40:59,882 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | job 7004226071 has completed (purged errors)
[2026-02-09 05:42:05] 2026-02-09 04:40:59,883 | INFO     | overall cleanup function is called
[2026-02-09 05:42:05] 2026-02-09 04:41:00,890 | INFO     | --- collectZombieJob: --- 10, [2237124]
[2026-02-09 05:42:05] 2026-02-09 04:41:00,890 | INFO     | zombie collector waiting for pid 2237124
[2026-02-09 05:42:05] 2026-02-09 04:41:00,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 05:42:05] 2026-02-09 04:41:00,890 | INFO     | collected zombie processes
[2026-02-09 05:42:05] 2026-02-09 04:41:00,890 | INFO     | will attempt to kill all subprocesses of pid=2237124
[2026-02-09 05:42:05] 2026-02-09 04:41:00,954 | INFO     | process IDs to be killed: [2237124] (in reverse order)
[2026-02-09 05:42:05] 2026-02-09 04:41:00,981 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 05:42:05] 2026-02-09 04:41:00,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 05:42:05] 2026-02-09 04:41:00,983 | INFO     | did not find any defunct processes belonging to 2237124
[2026-02-09 05:42:05] 2026-02-09 04:41:00,985 | INFO     | did not find any defunct processes belonging to 2237124
[2026-02-09 05:42:05] 2026-02-09 04:41:00,985 | INFO     | ready for new job
[2026-02-09 05:42:05] 2026-02-09 04:41:00,985 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 05:42:05] 2026-02-09 04:41:00,986 | INFO     | **************************************
[2026-02-09 05:42:05] 2026-02-09 04:41:00,986 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 05:42:05] 2026-02-09 04:41:00,986 | INFO     | **************************************
[2026-02-09 05:42:05] 2026-02-09 04:41:00,986 | INFO     | 
[2026-02-09 05:42:05] 2026-02-09 04:41:00,987 | INFO     | architecture information:
[2026-02-09 05:42:05] 2026-02-09 04:41:00,987 | INFO     | executing command: cat /etc/os-release
[2026-02-09 05:42:05] 2026-02-09 04:41:00,997 | INFO     | cat /etc/os-release:
[2026-02-09 05:42:05] NAME="CentOS Linux"
[2026-02-09 05:42:05] VERSION="7 (Core)"
[2026-02-09 05:42:05] ID="centos"
[2026-02-09 05:42:05] ID_LIKE="rhel fedora"
[2026-02-09 05:42:05] VERSION_ID="7"
[2026-02-09 05:42:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 05:42:05] ANSI_COLOR="0;31"
[2026-02-09 05:42:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 05:42:05] HOME_URL="https://www.centos.org/"
[2026-02-09 05:42:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 05:42:05] 
[2026-02-09 05:42:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 05:42:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 05:42:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 05:42:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 05:42:05] 
[2026-02-09 05:42:05] 2026-02-09 04:41:00,997 | INFO     | **************************************
[2026-02-09 05:42:05] 2026-02-09 04:41:01,498 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/11
[2026-02-09 05:42:05] 2026-02-09 04:41:01,512 | INFO     | sufficient remaining disk space (696146460672 B)
[2026-02-09 05:42:05] 2026-02-09 04:41:01,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 05:42:05] 2026-02-09 04:41:01,512 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 05:42:05] 2026-02-09 04:41:01,512 | INFO     | update_server=False
[2026-02-09 05:42:05] 2026-02-09 04:41:01,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 05:42:05] 2026-02-09 04:41:01,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 05:42:05] 2026-02-09 04:41:01,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 05:42:05] 2026-02-09 04:41:01,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 05:42:05] 2026-02-09 04:41:01,513 | INFO     | aborting loop
[2026-02-09 05:42:05] 2026-02-09 04:41:02,464 | INFO     | all data control threads have been joined
[2026-02-09 05:42:05] 2026-02-09 04:41:02,517 | INFO     | [job] retrieve thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:02,518 | INFO     | [job] queue monitor thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:02,518 | INFO     | [job] job monitor thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:02,601 | INFO     | [payload] failed_post thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:02,909 | INFO     | job.realtimelogging is not enabled
[2026-02-09 05:42:05] 2026-02-09 04:41:02,920 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:02,925 | INFO     | all payload control threads have been joined
[2026-02-09 05:42:05] 2026-02-09 04:41:03,013 | INFO     | all job control threads have been joined
[2026-02-09 05:42:05] 2026-02-09 04:41:03,225 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:03,257 | INFO     | [job] validate thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:03,259 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:03,470 | INFO     | [data] control thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:03,516 | INFO     | [data] copytool_out thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:03,577 | INFO     | [payload] validate_post thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:03,689 | INFO     | [data] copytool_in thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:03,913 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:03,930 | INFO     | [payload] control thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:04,019 | INFO     | [job] control thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:04,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 05:42:05] 2026-02-09 04:41:08,942 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 05:42:05] 2026-02-09 04:41:31,775 | INFO     | PID=2232446 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 05:42:05] 2026-02-09 04:41:31,789 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 05:42:05] 2026-02-09 04:41:31,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 05:42:05] 2026-02-09 04:41:31,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 05:42:05] 2026-02-09 04:41:51,989 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-02-09 05:42:05] 2026-02-09 04:41:59,485 | INFO     | [monitor] cgroup control has ended
[2026-02-09 05:42:05] 2026-02-09 04:41:59,957 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913927075648)>', '<ExcThread(monitor, started 139913257285376)>']
[2026-02-09 05:42:05] 2026-02-09 04:42:00,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 05:42:05] 2026-02-09 04:42:00,899 | INFO     | [monitor] control thread has ended
[2026-02-09 05:42:05] 2026-02-09 04:42:04,982 | INFO     | all workflow threads have been joined
[2026-02-09 05:42:05] 2026-02-09 04:42:04,996 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 05:42:05] 2026-02-09 04:42:04,997 | INFO     | traces error code: 0
[2026-02-09 05:42:05] 2026-02-09 04:42:04,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 05:42:05] 2026-02-09 04:42:05,055 [wrapper] ==== pilot stdout END ====
[2026-02-09 05:42:05] 2026-02-09 04:42:05,056 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 05:42:05] 2026-02-09 04:42:05,057 [wrapper] pilotpid: 2232446
[2026-02-09 05:42:05] 2026-02-09 04:42:05,059 [wrapper] Pilot exit status: 0
[2026-02-09 05:42:05] 2026-02-09 04:42:05,064 [wrapper] pandaids: 7004226071
[2026-02-09 05:42:05] 2026-02-09 04:42:05,077 [wrapper] cleanup supervisor_pilot 2242805 2232447
[2026-02-09 05:42:05] 2026-02-09 04:42:05,079 [wrapper] Test setup, not cleaning
[2026-02-09 05:42:05] 2026-02-09 04:42:05,080 [wrapper] apfmon messages muted
[2026-02-09 05:42:05] 2026-02-09 04:42:05,081 [wrapper] ==== wrapper stdout END ====
[2026-02-09 05:42:05] 2026-02-09 04:42:05,083 [wrapper] ==== wrapper stderr END ====
[2026-02-09 05:42:05]  *** Error codes and diagnostics ***
[2026-02-09 05:42:05]     "exeErrorCode": 0,
[2026-02-09 05:42:05]     "exeErrorDiag": "",
[2026-02-09 05:42:05]     "pilotErrorCode": 0,
[2026-02-09 05:42:05]     "pilotErrorDiag": "",
[2026-02-09 05:42:05]  *** Listing of results directory ***
[2026-02-09 05:42:05] total 662628
[2026-02-09 05:42:05] -rwx------ 1 boinc boinc     36322 Feb  8 08:07 runpilot2-wrapper.sh
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc    584627 Feb  8 08:08 pilot3.tar.gz
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc      5111 Feb  8 08:10 queuedata.json
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc       100 Feb  9 04:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 05:42:05] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 04:56 run_atlas
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc       105 Feb  9 04:56 job.xml
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc      6728 Feb  9 04:56 init_data.xml
[2026-02-09 05:42:05] -rw-r--r-- 2 boinc boinc 492559355 Feb  9 04:56 EVNT.48442027._000102.pool.root.1
[2026-02-09 05:42:05] -rw-r--r-- 2 boinc boinc     15845 Feb  9 04:56 start_atlas.sh
[2026-02-09 05:42:05] drwxrwx--x 2 boinc boinc      4096 Feb  9 04:56 shared
[2026-02-09 05:42:05] -rw-r--r-- 2 boinc boinc    597957 Feb  9 04:56 input.tar.gz
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc         0 Feb  9 04:56 boinc_lockfile
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc      2528 Feb  9 04:56 pandaJob.out
[2026-02-09 05:42:05] -rw------- 1 boinc boinc   1009504 Feb  9 04:56 agis_schedconf.cvmfs.json
[2026-02-09 05:42:05] -rw------- 1 boinc boinc   1513088 Feb  9 04:56 agis_ddmendpoints.agis.ALL.json
[2026-02-09 05:42:05] -rw------- 1 boinc boinc       446 Feb  9 04:56 workernode_map.json
[2026-02-09 05:42:05] drwx------ 5 boinc boinc      4096 Feb  9 04:56 pilot3
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc       530 Feb  9 05:40 boinc_task_state.xml
[2026-02-09 05:42:05] -rw------- 1 boinc boinc 180509902 Feb  9 05:40 HITS.48442031._005144.pool.root.1
[2026-02-09 05:42:05] -rw------- 1 boinc boinc      1010 Feb  9 05:40 memory_monitor_summary.json
[2026-02-09 05:42:05] -rw------- 1 boinc boinc    349028 Feb  9 05:40 log.48442031._005144.job.log.tgz.1
[2026-02-09 05:42:05] -rw------- 1 boinc boinc      6346 Feb  9 05:40 heartbeat.json
[2026-02-09 05:42:05] -rw------- 1 boinc boinc        95 Feb  9 05:41 pilot_heartbeat.json
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc      8192 Feb  9 05:42 boinc_mmap_file
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc        27 Feb  9 05:42 wrapper_checkpoint.txt
[2026-02-09 05:42:05] -rw------- 1 boinc boinc      4825 Feb  9 05:42 pilotlog.txt
[2026-02-09 05:42:05] -rw------- 1 boinc boinc    413323 Feb  9 05:42 log.48442031._005144.job.log.1
[2026-02-09 05:42:05] -rw------- 1 boinc boinc       357 Feb  9 05:42 output.list
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc       620 Feb  9 05:42 runtime_log
[2026-02-09 05:42:05] -rw------- 1 boinc boinc    778240 Feb  9 05:42 result.tar.gz
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc      9147 Feb  9 05:42 runtime_log.err
[2026-02-09 05:42:05] -rw------- 1 boinc boinc       706 Feb  9 05:42 JvuMDmr4D98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKAdKDmv0q9Cn.diag
[2026-02-09 05:42:05] -rw-r--r-- 1 boinc boinc     21419 Feb  9 05:42 stderr.txt
[2026-02-09 05:42:05] HITS file was successfully produced:
[2026-02-09 05:42:05] -rw------- 1 boinc boinc 180509902 Feb  9 05:40 shared/HITS.pool.root.1
[2026-02-09 05:42:05]  *** Contents of shared directory: ***
[2026-02-09 05:42:05] total 658664
[2026-02-09 05:42:05] -rw-r--r-- 2 boinc boinc 492559355 Feb  9 04:56 ATLAS.root_0
[2026-02-09 05:42:05] -rw-r--r-- 2 boinc boinc     15845 Feb  9 04:56 start_atlas.sh
[2026-02-09 05:42:05] -rw-r--r-- 2 boinc boinc    597957 Feb  9 04:56 input.tar.gz
[2026-02-09 05:42:05] -rw------- 1 boinc boinc 180509902 Feb  9 05:40 HITS.pool.root.1
[2026-02-09 05:42:05] -rw------- 1 boinc boinc    778240 Feb  9 05:42 result.tar.gz
05:42:06 (2228269): run_atlas exited; CPU time 28411.428374
05:42:06 (2228269): called boinc_finish(0)

</stderr_txt>
]]>

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