Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:53:09 (17039): wrapper (7.7.26015): starting
06:53:09 (17039): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 06:53:09] Arguments: --nthreads 8
[2026-02-08 06:53:09] Threads: 8
[2026-02-08 06:53:09] Checking for CVMFS
[2026-02-08 06:53:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 06:53:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 06:53:10] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 06:53:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 06:53:10] 2.11.2.0 10718 224235 149268 156018 2 52 12630507 18432000 1833 130560 0 146990095 99.981 8355258 30078 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-08 06:53:10] CVMFS is ok
[2026-02-08 06:53:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 06:53:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 06:53:10] Further information can be found at the LHC@home message board.
[2026-02-08 06:53:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 06:53:10] Checking for apptainer binary...
[2026-02-08 06:53:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 06:53:10] Running /usr/bin/apptainer --version
[2026-02-08 06:53:10] apptainer version 1.3.2-1.el7
[2026-02-08 06:53:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 06:53:11] c-206-2.aglt2.org
[2026-02-08 06:53:11] apptainer works
[2026-02-08 06:53:11] Set ATHENA_PROC_NUMBER=8
[2026-02-08 06:53:11] Set ATHENA_CORE_NUMBER=8
[2026-02-08 06:53:11] Starting ATLAS job with PandaID=7003988685
[2026-02-08 06:53:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 10:14:53]  *** The last 200 lines of the pilot log: ***
[2026-02-08 10:14:53] 2026-02-08 15:14:30,395 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 10:14:53] 2026-02-08 15:14:30,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 10:14:53] 2026-02-08 15:14:30,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 10:14:53] 2026-02-08 15:14:30,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 10:14:53] 2026-02-08 15:14:30,401 | INFO     | fitting pss+swap vs Time
[2026-02-08 10:14:53] 2026-02-08 15:14:30,402 | INFO     | sum of square deviations: 2406926989.5
[2026-02-08 10:14:53] 2026-02-08 15:14:30,403 | INFO     | sum of deviations: -11129093576.999996
[2026-02-08 10:14:53] 2026-02-08 15:14:30,404 | INFO     | mean x: 1770557635.5
[2026-02-08 10:14:53] 2026-02-08 15:14:30,404 | INFO     | mean y: 2490969.606060606
[2026-02-08 10:14:53] 2026-02-08 15:14:30,404 | INFO     | intersect: 8189154584.626924
[2026-02-08 10:14:53] 2026-02-08 15:14:30,405 | INFO     | chi2: 2.314752909184433
[2026-02-08 10:14:53] 2026-02-08 15:14:30,405 | INFO     | sum of square deviations: 2229146912.0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,407 | INFO     | sum of deviations: 2178201541.9999957
[2026-02-08 10:14:53] 2026-02-08 15:14:30,407 | INFO     | mean x: 1770557483.0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,408 | INFO     | mean y: 2502154.652849741
[2026-02-08 10:14:53] 2026-02-08 15:14:30,408 | INFO     | intersect: -1727590653.0078375
[2026-02-08 10:14:53] 2026-02-08 15:14:30,408 | INFO     | chi2: 1.5417417901732435
[2026-02-08 10:14:53] 2026-02-08 15:14:30,409 | INFO     | current chi2=1.5417417901732435 (change=33.394973430816336 %)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,409 | INFO     | sum of square deviations: 2060343747.0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,411 | INFO     | sum of deviations: 2148481884.500001
[2026-02-08 10:14:53] 2026-02-08 15:14:30,411 | INFO     | mean x: 1770557330.5
[2026-02-08 10:14:53] 2026-02-08 15:14:30,411 | INFO     | mean y: 2502127.7819148935
[2026-02-08 10:14:53] 2026-02-08 15:14:30,411 | INFO     | intersect: -1843796751.0274231
[2026-02-08 10:14:53] 2026-02-08 15:14:30,412 | INFO     | chi2: 1.5420171892492873
[2026-02-08 10:14:53] 2026-02-08 15:14:30,412 | INFO     | current chi2=1.5420171892492873 (change=-0.01786285341677387 %)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,412 | INFO     | right removable region: 187
[2026-02-08 10:14:53] 2026-02-08 15:14:30,413 | INFO     | sum of square deviations: 2229146912.0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,415 | INFO     | sum of deviations: -39230383379.0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,415 | INFO     | mean x: 1770557788.0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,415 | INFO     | mean y: 2514783.3264248706
[2026-02-08 10:14:53] 2026-02-08 15:14:30,416 | INFO     | intersect: 31162264929.894695
[2026-02-08 10:14:53] 2026-02-08 15:14:30,416 | INFO     | chi2: 0.9636664911919199
[2026-02-08 10:14:53] 2026-02-08 15:14:30,416 | INFO     | current chi2=0.9636664911919199 (change=58.36849421947793 %)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,417 | INFO     | sum of square deviations: 2060343747.0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,419 | INFO     | sum of deviations: -37038906590.0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,419 | INFO     | mean x: 1770557940.5
[2026-02-08 10:14:53] 2026-02-08 15:14:30,419 | INFO     | mean y: 2512750.8936170214
[2026-02-08 10:14:53] 2026-02-08 15:14:30,420 | INFO     | intersect: 31831924840.915253
[2026-02-08 10:14:53] 2026-02-08 15:14:30,420 | INFO     | chi2: 0.947374869320228
[2026-02-08 10:14:53] 2026-02-08 15:14:30,421 | INFO     | current chi2=0.947374869320228 (change=1.6905871502849008 %)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,421 | INFO     | left removable region: 20
[2026-02-08 10:14:53] 2026-02-08 15:14:30,421 | INFO     | sum of square deviations: 1444149868.0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,423 | INFO     | sum of deviations: -10730790904.999998
[2026-02-08 10:14:53] 2026-02-08 15:14:30,423 | INFO     | mean x: 1770557910.0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,423 | INFO     | mean y: 2512220.832335329
[2026-02-08 10:14:53] 2026-02-08 15:14:30,424 | INFO     | intersect: 13158686062.897738
[2026-02-08 10:14:53] 2026-02-08 15:14:30,424 | INFO     | chi2: 0.10114543294886914
[2026-02-08 10:14:53] 2026-02-08 15:14:30,424 | INFO     | current memory leak: -7.43 B/s (using 167 data points, chi2=0.10)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,425 | INFO     | could have reported an average CPU frequency of 2405 MHz (10 samples)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,425 | INFO     | ..............................
[2026-02-08 10:14:53] 2026-02-08 15:14:30,425 | INFO     | . Timing measurements:
[2026-02-08 10:14:53] 2026-02-08 15:14:30,425 | INFO     | . get job = 0 s
[2026-02-08 10:14:53] 2026-02-08 15:14:30,426 | INFO     | . initial setup = 5 s
[2026-02-08 10:14:53] 2026-02-08 15:14:30,426 | INFO     | . payload setup = 4 s
[2026-02-08 10:14:53] 2026-02-08 15:14:30,426 | INFO     | . stage-in = 0 s
[2026-02-08 10:14:53] 2026-02-08 15:14:30,426 | INFO     | . payload execution = 12040 s
[2026-02-08 10:14:53] 2026-02-08 15:14:30,426 | INFO     | . stage-out = 2 s
[2026-02-08 10:14:53] 2026-02-08 15:14:30,426 | INFO     | . log creation = 0 s
[2026-02-08 10:14:53] 2026-02-08 15:14:30,427 | INFO     | ..............................
[2026-02-08 10:14:53] 2026-02-08 15:14:30,618 | INFO     | time since job start (12064s) is within the limit (349056.0s)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,653 | INFO     | 
[2026-02-08 10:14:53] 2026-02-08 15:14:30,653 | INFO     | job summary report
[2026-02-08 10:14:53] 2026-02-08 15:14:30,653 | INFO     | --------------------------------------------------
[2026-02-08 10:14:53] 2026-02-08 15:14:30,654 | INFO     | PanDA job id: 7003988685
[2026-02-08 10:14:53] 2026-02-08 15:14:30,654 | INFO     | task id: 48318042
[2026-02-08 10:14:53] 2026-02-08 15:14:30,654 | INFO     | errors: (none)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,654 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 10:14:53] 2026-02-08 15:14:30,655 | INFO     | pilot state: finished 
[2026-02-08 10:14:53] 2026-02-08 15:14:30,655 | INFO     | transexitcode: 0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,655 | INFO     | exeerrorcode: 0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,655 | INFO     | exeerrordiag: 
[2026-02-08 10:14:53] 2026-02-08 15:14:30,655 | INFO     | exitcode: 0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,656 | INFO     | exitmsg: OK
[2026-02-08 10:14:53] 2026-02-08 15:14:30,656 | INFO     | cpuconsumptiontime: 91518 s
[2026-02-08 10:14:53] 2026-02-08 15:14:30,656 | INFO     | nevents: 400
[2026-02-08 10:14:53] 2026-02-08 15:14:30,656 | INFO     | neventsw: 0
[2026-02-08 10:14:53] 2026-02-08 15:14:30,657 | INFO     | pid: 25427
[2026-02-08 10:14:53] 2026-02-08 15:14:30,657 | INFO     | pgrp: 25427
[2026-02-08 10:14:53] 2026-02-08 15:14:30,657 | INFO     | corecount: 8
[2026-02-08 10:14:53] 2026-02-08 15:14:30,657 | INFO     | event service: False
[2026-02-08 10:14:53] 2026-02-08 15:14:30,658 | INFO     | sizes: {0: 2282898, 1: 2283132, 11: 2283132, 12049: 2312685, 12052: 2321739, 12053: 2321877}
[2026-02-08 10:14:53] 2026-02-08 15:14:30,658 | INFO     | --------------------------------------------------
[2026-02-08 10:14:53] 2026-02-08 15:14:30,658 | INFO     | 
[2026-02-08 10:14:53] 2026-02-08 15:14:30,658 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-08 10:14:53] 2026-02-08 15:14:30,688 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,688 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,688 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,688 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,689 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,689 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,692 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,693 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 10:14:53] 2026-02-08 15:14:30,693 | INFO     | job 7003988685 has completed (purged errors)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,693 | INFO     | overall cleanup function is called
[2026-02-08 10:14:53] 2026-02-08 15:14:30,727 | WARNING  | process 25427 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 10:14:53] 2026-02-08 15:14:30,859 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 10:14:53] 2026-02-08 15:14:30,985 | INFO     | number of running child processes to parent process 25427: 1
[2026-02-08 10:14:53] 2026-02-08 15:14:30,991 | INFO     | maximum number of monitored processes: 6
[2026-02-08 10:14:53] 2026-02-08 15:14:30,991 | INFO     | aborting job monitoring since job object (job id=7003988685) has expired
[2026-02-08 10:14:53] 2026-02-08 15:14:31,701 | INFO     | --- collectZombieJob: --- 10, [25427]
[2026-02-08 10:14:53] 2026-02-08 15:14:31,701 | INFO     | zombie collector waiting for pid 25427
[2026-02-08 10:14:53] 2026-02-08 15:14:31,701 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 10:14:53] 2026-02-08 15:14:31,701 | INFO     | collected zombie processes
[2026-02-08 10:14:53] 2026-02-08 15:14:31,701 | INFO     | will attempt to kill all subprocesses of pid=25427
[2026-02-08 10:14:53] 2026-02-08 15:14:31,845 | INFO     | process IDs to be killed: [25427] (in reverse order)
[2026-02-08 10:14:53] 2026-02-08 15:14:31,904 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 10:14:53] 2026-02-08 15:14:31,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 10:14:53] 2026-02-08 15:14:31,907 | INFO     | did not find any defunct processes belonging to 25427
[2026-02-08 10:14:53] 2026-02-08 15:14:31,910 | INFO     | did not find any defunct processes belonging to 25427
[2026-02-08 10:14:53] 2026-02-08 15:14:31,910 | INFO     | ready for new job
[2026-02-08 10:14:53] 2026-02-08 15:14:31,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 10:14:53] 2026-02-08 15:14:31,911 | INFO     | **************************************
[2026-02-08 10:14:53] 2026-02-08 15:14:31,911 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 10:14:53] 2026-02-08 15:14:31,911 | INFO     | **************************************
[2026-02-08 10:14:53] 2026-02-08 15:14:31,912 | INFO     | 
[2026-02-08 10:14:53] 2026-02-08 15:14:31,912 | INFO     | architecture information:
[2026-02-08 10:14:53] 2026-02-08 15:14:31,913 | INFO     | executing command: cat /etc/os-release
[2026-02-08 10:14:53] 2026-02-08 15:14:31,925 | INFO     | cat /etc/os-release:
[2026-02-08 10:14:53] NAME="CentOS Linux"
[2026-02-08 10:14:53] VERSION="7 (Core)"
[2026-02-08 10:14:53] ID="centos"
[2026-02-08 10:14:53] ID_LIKE="rhel fedora"
[2026-02-08 10:14:53] VERSION_ID="7"
[2026-02-08 10:14:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 10:14:53] ANSI_COLOR="0;31"
[2026-02-08 10:14:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 10:14:53] HOME_URL="https://www.centos.org/"
[2026-02-08 10:14:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 10:14:53] 
[2026-02-08 10:14:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 10:14:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 10:14:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 10:14:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 10:14:53] 
[2026-02-08 10:14:53] 2026-02-08 15:14:31,925 | INFO     | **************************************
[2026-02-08 10:14:53] 2026-02-08 15:14:32,428 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-08 10:14:53] 2026-02-08 15:14:32,448 | INFO     | sufficient remaining disk space (25983713280 B)
[2026-02-08 10:14:53] 2026-02-08 15:14:32,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 10:14:53] 2026-02-08 15:14:32,449 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 10:14:53] 2026-02-08 15:14:32,449 | INFO     | update_server=False
[2026-02-08 10:14:53] 2026-02-08 15:14:32,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 10:14:53] 2026-02-08 15:14:32,450 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-08 10:14:53] 2026-02-08 15:14:32,451 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 10:14:53] 2026-02-08 15:14:32,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 10:14:53] 2026-02-08 15:14:32,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 10:14:53] 2026-02-08 15:14:32,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 10:14:53] 2026-02-08 15:14:32,451 | INFO     | aborting loop
[2026-02-08 10:14:53] 2026-02-08 15:14:32,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 10:14:53] 2026-02-08 15:14:32,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 10:14:53] 2026-02-08 15:14:32,564 | INFO     | all data control threads have been joined
[2026-02-08 10:14:53] 2026-02-08 15:14:33,166 | INFO     | all payload control threads have been joined
[2026-02-08 10:14:53] 2026-02-08 15:14:33,203 | INFO     | all job control threads have been joined
[2026-02-08 10:14:53] 2026-02-08 15:14:33,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 10:14:53] 2026-02-08 15:14:33,229 | INFO     | job.realtimelogging is not enabled
[2026-02-08 10:14:53] 2026-02-08 15:14:33,452 | INFO     | [job] job monitor thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:33,453 | INFO     | [job] queue monitor thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:33,457 | INFO     | [job] retrieve thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:33,465 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:33,570 | INFO     | [data] control thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:33,757 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:33,830 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:33,887 | INFO     | [data] copytool_in thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:33,991 | INFO     | [payload] validate_post thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:34,172 | INFO     | [payload] control thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:34,209 | INFO     | [job] control thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:34,233 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:34,497 | INFO     | [job] validate thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:34,563 | INFO     | [payload] failed_post thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:35,223 | INFO     | [data] copytool_out thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:36,459 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 10:14:53] 2026-02-08 15:14:46,024 | INFO     | [monitor] cgroup control has ended
[2026-02-08 10:14:53] 2026-02-08 15:14:47,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872620627776)>', '<ExcThread(monitor, started 139872035657472)>']
[2026-02-08 10:14:53] 2026-02-08 15:14:48,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 10:14:53] 2026-02-08 15:14:48,522 | INFO     | [monitor] control thread has ended
[2026-02-08 10:14:53] 2026-02-08 15:14:52,713 | INFO     | all workflow threads have been joined
[2026-02-08 10:14:53] 2026-02-08 15:14:52,723 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 10:14:53] 2026-02-08 15:14:52,723 | INFO     | traces error code: 0
[2026-02-08 10:14:53] 2026-02-08 15:14:52,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 10:14:53] 2026-02-08 15:14:52,856 [wrapper] ==== pilot stdout END ====
[2026-02-08 10:14:53] 2026-02-08 15:14:52,859 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 10:14:53] 2026-02-08 15:14:52,862 [wrapper] pilotpid: 20996
[2026-02-08 10:14:53] 2026-02-08 15:14:52,865 [wrapper] Pilot exit status: 0
[2026-02-08 10:14:53] 2026-02-08 15:14:52,875 [wrapper] pandaids: 7003988685
[2026-02-08 10:14:53] 2026-02-08 15:14:52,914 [wrapper] cleanup supervisor_pilot 23629 20997
[2026-02-08 10:14:53] 2026-02-08 15:14:52,917 [wrapper] Test setup, not cleaning
[2026-02-08 10:14:53] 2026-02-08 15:14:52,920 [wrapper] apfmon messages muted
[2026-02-08 10:14:53] 2026-02-08 15:14:52,922 [wrapper] ==== wrapper stdout END ====
[2026-02-08 10:14:53] 2026-02-08 15:14:52,925 [wrapper] ==== wrapper stderr END ====
[2026-02-08 10:14:53]  *** Error codes and diagnostics ***
[2026-02-08 10:14:53]     "exeErrorCode": 0,
[2026-02-08 10:14:53]     "exeErrorDiag": "",
[2026-02-08 10:14:53]     "pilotErrorCode": 0,
[2026-02-08 10:14:53]     "pilotErrorDiag": "",
[2026-02-08 10:14:53]  *** Listing of results directory ***
[2026-02-08 10:14:53] total 672052
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas    584627 Feb  8 00:10 pilot3.tar.gz
[2026-02-08 10:14:53] -rwx------ 1 boincer umatlas     36322 Feb  8 00:13 runpilot2-wrapper.sh
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas      5111 Feb  8 00:17 queuedata.json
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas       100 Feb  8 06:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 10:14:53] -rwxr-xr-x 1 boincer umatlas      7986 Feb  8 06:53 run_atlas
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas       105 Feb  8 06:53 job.xml
[2026-02-08 10:14:53] -rw-r--r-- 2 boincer umatlas 496419452 Feb  8 06:53 EVNT.48318040._000250.pool.root.1
[2026-02-08 10:14:53] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 06:53 start_atlas.sh
[2026-02-08 10:14:53] drwxrwx--x 2 boincer umatlas      4096 Feb  8 06:53 shared
[2026-02-08 10:14:53] -rw-r--r-- 2 boincer umatlas    597964 Feb  8 06:53 input.tar.gz
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas         0 Feb  8 06:53 boinc_lockfile
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas      2537 Feb  8 06:53 pandaJob.out
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas        57 Feb  8 06:53 setup.sh.local
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas   1009518 Feb  8 06:53 agis_schedconf.cvmfs.json
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas       444 Feb  8 06:53 workernode_map.json
[2026-02-08 10:14:53] drwx------ 5 boincer umatlas      4096 Feb  8 06:53 pilot3
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas      5951 Feb  8 10:11 init_data.xml
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas        95 Feb  8 10:13 pilot_heartbeat.json
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas 183567286 Feb  8 10:13 HITS.48318042._013125.pool.root.1
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas       531 Feb  8 10:14 boinc_task_state.xml
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas      1053 Feb  8 10:14 memory_monitor_summary.json
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas   1513088 Feb  8 10:14 agis_ddmendpoints.agis.ALL.json
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas    427578 Feb  8 10:14 log.48318042._013125.job.log.tgz.1
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas      6424 Feb  8 10:14 heartbeat.json
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas      8192 Feb  8 10:14 boinc_mmap_file
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas        28 Feb  8 10:14 wrapper_checkpoint.txt
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas      4620 Feb  8 10:14 pilotlog.txt
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas   1694923 Feb  8 10:14 log.48318042._013125.job.log.1
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas       357 Feb  8 10:14 output.list
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas       620 Feb  8 10:14 runtime_log
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas   2140160 Feb  8 10:14 result.tar.gz
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas      9337 Feb  8 10:14 runtime_log.err
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas       660 Feb  8 10:14 4RmMDmVIC98n9Rq4apOajLDm4fhM0noT9bVooX4SDmuYcKDmZ9KF9m.diag
[2026-02-08 10:14:53] -rw-r--r-- 1 boincer umatlas     20981 Feb  8 10:14 stderr.txt
[2026-02-08 10:14:53] HITS file was successfully produced:
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas 183567286 Feb  8 10:13 shared/HITS.pool.root.1
[2026-02-08 10:14:53]  *** Contents of shared directory: ***
[2026-02-08 10:14:53] total 666756
[2026-02-08 10:14:53] -rw-r--r-- 2 boincer umatlas 496419452 Feb  8 06:53 ATLAS.root_0
[2026-02-08 10:14:53] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 06:53 start_atlas.sh
[2026-02-08 10:14:53] -rw-r--r-- 2 boincer umatlas    597964 Feb  8 06:53 input.tar.gz
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas 183567286 Feb  8 10:13 HITS.pool.root.1
[2026-02-08 10:14:53] -rw------- 1 boincer umatlas   2140160 Feb  8 10:14 result.tar.gz
10:14:54 (17039): run_atlas exited; CPU time 91674.951908
10:14:54 (17039): called boinc_finish(0)

</stderr_txt>
]]>

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