Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
04:07:21 (216596): wrapper (7.7.26015): starting
04:07:21 (216596): wrapper: running run_atlas (--nthreads 4)
[2026-02-08 04:07:21] Arguments: --nthreads 4
[2026-02-08 04:07:21] Threads: 4
[2026-02-08 04:07:21] Checking for CVMFS
[2026-02-08 04:07:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 04:07:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 04:07:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 04:07:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 04:07:23] 2.13.3.0 633897 3142 54948 156018 1 188 4577494 6144001 6461 130560 0 8963823 99.947 403008 575 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-08 04:07:23] CVMFS is ok
[2026-02-08 04:07:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 04:07:23] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-08 04:07:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-08 04:07:23] Further information can be found at the LHC@home message board.
[2026-02-08 04:07:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 04:07:23] Checking for apptainer binary...
[2026-02-08 04:07:23] apptainer is not installed, using version from CVMFS
[2026-02-08 04:07:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 04:07:23] desktop-b650ef
[2026-02-08 04:07:23] apptainer works
[2026-02-08 04:07:23] Set ATHENA_PROC_NUMBER=4
[2026-02-08 04:07:23] Set ATHENA_CORE_NUMBER=4
[2026-02-08 04:07:23] Starting ATLAS job with PandaID=7003988669
[2026-02-08 04:07:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 05:30:49]  *** The last 200 lines of the pilot log: ***
[2026-02-08 05:30:49]  guid=97f0133f-7f41-46fd-b901-1eeb9035d617
[2026-02-08 05:30:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 05:30:49]  is_altstaged=None
[2026-02-08 05:30:49]  is_tar=False
[2026-02-08 05:30:49]  lfn=log.48318042._013109.job.log.tgz.1
[2026-02-08 05:30:49]  mtime=0
[2026-02-08 05:30:49]  protocol_id=None
[2026-02-08 05:30:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 05:30:49]  replicas=None
[2026-02-08 05:30:49]  scope=mc23_13p6TeV
[2026-02-08 05:30:49]  status=None
[2026-02-08 05:30:49]  status_code=0
[2026-02-08 05:30:49]  storage_token=
[2026-02-08 05:30:49]  surl=/var/lib/boinc-client/slots/13/PanDA_Pilot-7003988669/log.48318042._013109.job.log.tgz.1
[2026-02-08 05:30:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/ce/log.48318042._013109.job.log.tgz.1
[2026-02-08 05:30:49]  workdir=None
[2026-02-08 05:30:49] ]
[2026-02-08 05:30:49] 2026-02-08 13:29:43,995 | INFO     | transferring file log.48318042._013109.job.log.tgz.1 from /var/lib/boinc-client/slots/13/PanDA_Pilot-7003988669/log.48318042._013109.job.log.tgz.1 to /var/lib/boin
[2026-02-08 05:30:49] 2026-02-08 13:29:43,995 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/13/PanDA_Pilot-7003988669/log.48318042._013109.job.log.tgz.1 /var/lib/boinc-client/slots/13/log.4831
[2026-02-08 05:30:49] 2026-02-08 13:29:44,006 | INFO     | adding to output.list: log.48318042._013109.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/ce/log.48318042._013109.job.log.tg
[2026-02-08 05:30:49] 2026-02-08 13:29:44,006 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 05:30:49] 2026-02-08 13:29:44,006 | INFO     | summary of transferred files:
[2026-02-08 05:30:49] 2026-02-08 13:29:44,006 | INFO     |  -- lfn=log.48318042._013109.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 05:30:49] 2026-02-08 13:29:44,006 | INFO     | stage-out finished correctly
[2026-02-08 05:30:49] 2026-02-08 13:29:44,048 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 05:30:49] 2026-02-08 13:29:44,251 | INFO     | job 7003988669 has state=finished
[2026-02-08 05:30:49] 2026-02-08 13:29:44,251 | INFO     | preparing for final server update for job 7003988669 in state='finished'
[2026-02-08 05:30:49] 2026-02-08 13:29:44,251 | INFO     | reading metadata from: /var/lib/boinc-client/slots/13/PanDA_Pilot-7003988669/jobReport.json
[2026-02-08 05:30:49] 2026-02-08 13:29:44,253 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/13/workernode_map.json
[2026-02-08 05:30:49] 2026-02-08 13:29:44,253 | INFO     | this job has now completed (state=finished)
[2026-02-08 05:30:49] 2026-02-08 13:29:44,253 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 05:30:49] 2026-02-08 13:29:44,253 | INFO     | log transfer has been attempted: DONE
[2026-02-08 05:30:49] 2026-02-08 13:29:44,253 | INFO     | job 7003988669 has finished - writing final server update
[2026-02-08 05:30:49] 2026-02-08 13:29:44,253 | INFO     | total number of processed events: 400 (read)
[2026-02-08 05:30:49] 2026-02-08 13:29:44,256 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-7003988669/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 05:30:49] 2026-02-08 13:29:44,256 | INFO     | extracted standard info from prmon json
[2026-02-08 05:30:49] 2026-02-08 13:29:44,256 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 05:30:49] 2026-02-08 13:29:44,256 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 05:30:49] 2026-02-08 13:29:44,256 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 05:30:49] 2026-02-08 13:29:44,256 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 05:30:49] 2026-02-08 13:29:44,257 | INFO     | fitting pss+swap vs Time
[2026-02-08 05:30:49] 2026-02-08 13:29:44,257 | INFO     | sum of square deviations: 125630262.5
[2026-02-08 05:30:49] 2026-02-08 13:29:44,257 | INFO     | sum of deviations: -1307088632.5000012
[2026-02-08 05:30:49] 2026-02-08 13:29:44,257 | INFO     | mean x: 1770555001.5
[2026-02-08 05:30:49] 2026-02-08 13:29:44,257 | INFO     | mean y: 2355221.7162162163
[2026-02-08 05:30:49] 2026-02-08 13:29:44,257 | INFO     | intersect: 18423651728.015186
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | chi2: 0.0042533695379584424
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | current memory leak: -10.40 B/s (using 74 data points, chi2=0.00)
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | could have reported an average CPU frequency of 4608 MHz (6 samples)
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | ..............................
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | . Timing measurements:
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | . get job = 0 s
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | . initial setup = 4 s
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | . payload setup = 1 s
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | . stage-in = 0 s
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | . payload execution = 4911 s
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | . stage-out = 0 s
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | . log creation = 0 s
[2026-02-08 05:30:49] 2026-02-08 13:29:44,258 | INFO     | ..............................
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | 
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | job summary report
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | --------------------------------------------------
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | PanDA job id: 7003988669
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | task id: 48318042
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | errors: (none)
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | pilot state: finished 
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | transexitcode: 0
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | exeerrorcode: 0
[2026-02-08 05:30:49] 2026-02-08 13:29:44,354 | INFO     | exeerrordiag: 
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | exitcode: 0
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | exitmsg: OK
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | cpuconsumptiontime: 18965 s
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | nevents: 400
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | neventsw: 0
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | pid: 225490
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | pgrp: 225490
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | corecount: 4
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | event service: False
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | sizes: {0: 2283114, 10: 2283114, 4917: 2309451, 4918: 2318658}
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | --------------------------------------------------
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | 
[2026-02-08 05:30:49] 2026-02-08 13:29:44,355 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | job 7003988669 has completed (purged errors)
[2026-02-08 05:30:49] 2026-02-08 13:29:44,366 | INFO     | overall cleanup function is called
[2026-02-08 05:30:49] 2026-02-08 13:29:45,373 | INFO     | --- collectZombieJob: --- 10, [225490]
[2026-02-08 05:30:49] 2026-02-08 13:29:45,373 | INFO     | zombie collector waiting for pid 225490
[2026-02-08 05:30:49] 2026-02-08 13:29:45,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 05:30:49] 2026-02-08 13:29:45,373 | INFO     | collected zombie processes
[2026-02-08 05:30:49] 2026-02-08 13:29:45,373 | INFO     | will attempt to kill all subprocesses of pid=225490
[2026-02-08 05:30:49] 2026-02-08 13:29:45,479 | INFO     | process IDs to be killed: [225490] (in reverse order)
[2026-02-08 05:30:49] 2026-02-08 13:29:45,523 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 05:30:49] 2026-02-08 13:29:45,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 05:30:49] 2026-02-08 13:29:45,526 | INFO     | did not find any defunct processes belonging to 225490
[2026-02-08 05:30:49] 2026-02-08 13:29:45,529 | INFO     | did not find any defunct processes belonging to 225490
[2026-02-08 05:30:49] 2026-02-08 13:29:45,529 | INFO     | ready for new job
[2026-02-08 05:30:49] 2026-02-08 13:29:45,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 05:30:49] 2026-02-08 13:29:45,530 | INFO     | **************************************
[2026-02-08 05:30:49] 2026-02-08 13:29:45,530 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 05:30:49] 2026-02-08 13:29:45,530 | INFO     | **************************************
[2026-02-08 05:30:49] 2026-02-08 13:29:45,530 | INFO     | 
[2026-02-08 05:30:49] 2026-02-08 13:29:45,531 | INFO     | architecture information:
[2026-02-08 05:30:49] 2026-02-08 13:29:45,531 | INFO     | executing command: cat /etc/os-release
[2026-02-08 05:30:49] 2026-02-08 13:29:45,540 | INFO     | cat /etc/os-release:
[2026-02-08 05:30:49] NAME="CentOS Linux"
[2026-02-08 05:30:49] VERSION="7 (Core)"
[2026-02-08 05:30:49] ID="centos"
[2026-02-08 05:30:49] ID_LIKE="rhel fedora"
[2026-02-08 05:30:49] VERSION_ID="7"
[2026-02-08 05:30:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 05:30:49] ANSI_COLOR="0;31"
[2026-02-08 05:30:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 05:30:49] HOME_URL="https://www.centos.org/"
[2026-02-08 05:30:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 05:30:49] 
[2026-02-08 05:30:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 05:30:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 05:30:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 05:30:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 05:30:49] 
[2026-02-08 05:30:49] 2026-02-08 13:29:45,540 | INFO     | **************************************
[2026-02-08 05:30:49] 2026-02-08 13:29:46,043 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2026-02-08 05:30:49] 2026-02-08 13:29:46,053 | INFO     | sufficient remaining disk space (404004798464 B)
[2026-02-08 05:30:49] 2026-02-08 13:29:46,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 05:30:49] 2026-02-08 13:29:46,054 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 05:30:49] 2026-02-08 13:29:46,054 | INFO     | update_server=False
[2026-02-08 05:30:49] 2026-02-08 13:29:46,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 05:30:49] 2026-02-08 13:29:46,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 05:30:49] 2026-02-08 13:29:46,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 05:30:49] 2026-02-08 13:29:46,649 | WARNING  | process 225490 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 05:30:49] 2026-02-08 13:29:46,720 | INFO     | using path: /var/lib/boinc-client/slots/13/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 05:30:49] 2026-02-08 13:29:46,820 | INFO     | number of running child processes to parent process 225490: 1
[2026-02-08 05:30:49] 2026-02-08 13:29:46,820 | INFO     | maximum number of monitored processes: 6
[2026-02-08 05:30:49] 2026-02-08 13:29:46,820 | INFO     | aborting job monitoring since job object (job id=7003988669) has expired
[2026-02-08 05:30:49] 2026-02-08 13:29:46,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 05:30:49] 2026-02-08 13:29:46,820 | INFO     | will abort loop
[2026-02-08 05:30:49] 2026-02-08 13:29:46,945 | INFO     | all data control threads have been joined
[2026-02-08 05:30:49] 2026-02-08 13:29:47,003 | INFO     | all job control threads have been joined
[2026-02-08 05:30:49] 2026-02-08 13:29:47,007 | INFO     | all payload control threads have been joined
[2026-02-08 05:30:49] 2026-02-08 13:29:47,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 05:30:49] 2026-02-08 13:29:47,058 | INFO     | [job] retrieve thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:47,059 | INFO     | [job] queue monitor thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:47,088 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:47,368 | INFO     | [payload] failed_post thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:47,825 | INFO     | [job] job monitor thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:47,880 | INFO     | [payload] validate_post thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:47,951 | INFO     | [data] control thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:48,008 | INFO     | [job] control thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:48,008 | INFO     | [payload] control thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:48,321 | INFO     | [job] validate thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:48,363 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:48,427 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:48,525 | INFO     | [data] copytool_in thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:49,058 | INFO     | [data] copytool_out thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:50,059 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:29:56,134 | INFO     | job.realtimelogging is not enabled
[2026-02-08 05:30:49] 2026-02-08 13:29:57,139 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 05:30:49] 2026-02-08 13:30:16,934 | INFO     | PID=220830 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-08 05:30:49] 2026-02-08 13:30:16,934 | INFO     | .. there are 8 such processes running
[2026-02-08 05:30:49] 2026-02-08 13:30:16,934 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 05:30:49] 2026-02-08 13:30:16,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 05:30:49] 2026-02-08 13:30:16,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 05:30:49] 2026-02-08 13:30:43,439 | INFO     | [monitor] cgroup control has ended
[2026-02-08 05:30:49] 2026-02-08 13:30:44,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131774777022272)>', '<ExcThread(monitor, started 131774025824000)>']
[2026-02-08 05:30:49] 2026-02-08 13:30:45,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 05:30:49] 2026-02-08 13:30:45,071 | INFO     | [monitor] control thread has ended
[2026-02-08 05:30:49] 2026-02-08 13:30:49,586 | INFO     | all workflow threads have been joined
[2026-02-08 05:30:49] 2026-02-08 13:30:49,586 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 05:30:49] 2026-02-08 13:30:49,586 | INFO     | traces error code: 0
[2026-02-08 05:30:49] 2026-02-08 13:30:49,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 05:30:49] 2026-02-08 13:30:49,641 [wrapper] ==== pilot stdout END ====
[2026-02-08 05:30:49] 2026-02-08 13:30:49,643 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 05:30:49] 2026-02-08 13:30:49,644 [wrapper] pilotpid: 220830
[2026-02-08 05:30:49] 2026-02-08 13:30:49,645 [wrapper] Pilot exit status: 0
[2026-02-08 05:30:49] 2026-02-08 13:30:49,650 [wrapper] pandaids: 7003988669
[2026-02-08 05:30:49] 2026-02-08 13:30:49,677 [wrapper] cleanup supervisor_pilot  330568 220831
[2026-02-08 05:30:49] 2026-02-08 13:30:49,678 [wrapper] Test setup, not cleaning
[2026-02-08 05:30:49] 2026-02-08 13:30:49,680 [wrapper] apfmon messages muted
[2026-02-08 05:30:49] 2026-02-08 13:30:49,681 [wrapper] ==== wrapper stdout END ====
[2026-02-08 05:30:49] 2026-02-08 13:30:49,682 [wrapper] ==== wrapper stderr END ====
[2026-02-08 05:30:49]  *** Error codes and diagnostics ***
[2026-02-08 05:30:49]     "exeErrorCode": 0,
[2026-02-08 05:30:49]     "exeErrorDiag": "",
[2026-02-08 05:30:49]     "pilotErrorCode": 0,
[2026-02-08 05:30:49]     "pilotErrorDiag": "",
[2026-02-08 05:30:49]  *** Listing of results directory ***
[2026-02-08 05:30:49] total 672952
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc    584627 Feb  7 21:10 pilot3.tar.gz
[2026-02-08 05:30:49] -rwx------ 1 boinc boinc     36322 Feb  7 21:12 runpilot2-wrapper.sh
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc      5111 Feb  7 21:12 queuedata.json
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc       100 Feb  8 04:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 05:30:49] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 04:07 run_atlas
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc       105 Feb  8 04:07 job.xml
[2026-02-08 05:30:49] -rw-r--r-- 2 boinc boinc 496580377 Feb  8 04:07 EVNT.48318040._000249.pool.root.1
[2026-02-08 05:30:49] -rw-r--r-- 2 boinc boinc    597963 Feb  8 04:07 input.tar.gz
[2026-02-08 05:30:49] drwxrwx--x 2 boinc boinc      4096 Feb  8 04:07 shared
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc         0 Feb  8 04:07 boinc_setup_complete
[2026-02-08 05:30:49] -rw-r--r-- 2 boinc boinc     15845 Feb  8 04:07 start_atlas.sh
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc     10204 Feb  8 04:07 init_data.xml
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc         0 Feb  8 04:07 boinc_lockfile
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc      2538 Feb  8 04:07 pandaJob.out
[2026-02-08 05:30:49] -rw------- 1 boinc boinc   1009518 Feb  8 04:07 agis_schedconf.cvmfs.json
[2026-02-08 05:30:49] -rw------- 1 boinc boinc   1513088 Feb  8 04:07 agis_ddmendpoints.agis.ALL.json
[2026-02-08 05:30:49] -rw------- 1 boinc boinc       430 Feb  8 04:07 workernode_map.json
[2026-02-08 05:30:49] drwx------ 5 boinc boinc      4096 Feb  8 04:07 pilot3
[2026-02-08 05:30:49] -rw------- 1 boinc boinc 186484967 Feb  8 05:29 HITS.48318042._013109.pool.root.1
[2026-02-08 05:30:49] -rw------- 1 boinc boinc        95 Feb  8 05:29 pilot_heartbeat.json
[2026-02-08 05:30:49] -rw------- 1 boinc boinc      1025 Feb  8 05:29 memory_monitor_summary.json
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc       530 Feb  8 05:29 boinc_task_state.xml
[2026-02-08 05:30:49] -rw------- 1 boinc boinc    304646 Feb  8 05:29 log.48318042._013109.job.log.tgz.1
[2026-02-08 05:30:49] -rw------- 1 boinc boinc      6306 Feb  8 05:29 heartbeat.json
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc      8192 Feb  8 05:30 boinc_mmap_file
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc        27 Feb  8 05:30 wrapper_checkpoint.txt
[2026-02-08 05:30:49] -rw------- 1 boinc boinc      5426 Feb  8 05:30 pilotlog.txt
[2026-02-08 05:30:49] -rw------- 1 boinc boinc    737489 Feb  8 05:30 log.48318042._013109.job.log.1
[2026-02-08 05:30:49] -rw------- 1 boinc boinc       357 Feb  8 05:30 output.list
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc       620 Feb  8 05:30 runtime_log
[2026-02-08 05:30:49] -rw------- 1 boinc boinc   1064960 Feb  8 05:30 result.tar.gz
[2026-02-08 05:30:49] -rw------- 1 boinc boinc       657 Feb  8 05:30 bgNMDmlGC98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmo0cKDmd7ZRQm.diag
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc      8963 Feb  8 05:30 runtime_log.err
[2026-02-08 05:30:49] -rw-r--r-- 1 boinc boinc     21472 Feb  8 05:30 stderr.txt
[2026-02-08 05:30:49] HITS file was successfully produced:
[2026-02-08 05:30:49] -rw------- 1 boinc boinc 186484967 Feb  8 05:29 shared/HITS.pool.root.1
[2026-02-08 05:30:49]  *** Contents of shared directory: ***
[2026-02-08 05:30:49] total 668708
[2026-02-08 05:30:49] -rw-r--r-- 2 boinc boinc 496580377 Feb  8 04:07 ATLAS.root_0
[2026-02-08 05:30:49] -rw-r--r-- 2 boinc boinc    597963 Feb  8 04:07 input.tar.gz
[2026-02-08 05:30:49] -rw-r--r-- 2 boinc boinc     15845 Feb  8 04:07 start_atlas.sh
[2026-02-08 05:30:49] -rw------- 1 boinc boinc 186484967 Feb  8 05:29 HITS.pool.root.1
[2026-02-08 05:30:49] -rw------- 1 boinc boinc   1064960 Feb  8 05:30 result.tar.gz
05:30:51 (216596): run_atlas exited; CPU time 19017.492606
05:30:51 (216596): called boinc_finish(0)

</stderr_txt>
]]>

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