Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:03:27 (19687): wrapper (7.7.26015): starting
11:03:27 (19687): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 11:03:27] Arguments: --nthreads 12
[2026-02-08 11:03:27] Threads: 12
[2026-02-08 11:03:27] Checking for CVMFS
[2026-02-08 11:03:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 11:03:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 11:03:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 11:03:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 11:03:27] 2.11.2.0 2979 394457 107532 156024 2 52 19918497 20275200 1 130560 2 168629461 99.954 22794647 16650 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-08 11:03:27] CVMFS is ok
[2026-02-08 11:03:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 11:03:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 11:03:27] Further information can be found at the LHC@home message board.
[2026-02-08 11:03:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 11:03:27] Checking for apptainer binary...
[2026-02-08 11:03:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 11:03:27] Running /usr/bin/apptainer --version
[2026-02-08 11:03:27] apptainer version 1.3.2-1.el7
[2026-02-08 11:03:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 11:03:29] c-205-7.aglt2.org
[2026-02-08 11:03:29] apptainer works
[2026-02-08 11:03:29] Set ATHENA_PROC_NUMBER=12
[2026-02-08 11:03:29] Set ATHENA_CORE_NUMBER=12
[2026-02-08 11:03:29] Starting ATLAS job with PandaID=6992965137
[2026-02-08 11:03:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 12:48:05]  *** The last 200 lines of the pilot log: ***
[2026-02-08 12:48:05] 2026-02-08 17:47:05,964 | INFO     | log transfer has been attempted: DONE
[2026-02-08 12:48:05] 2026-02-08 17:47:05,964 | INFO     | job 6992965137 has finished - writing final server update
[2026-02-08 12:48:05] 2026-02-08 17:47:05,965 | INFO     | total number of processed events: 400 (read)
[2026-02-08 12:48:05] 2026-02-08 17:47:05,967 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6992965137/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 12:48:05] 2026-02-08 17:47:05,967 | INFO     | extracted standard info from prmon json
[2026-02-08 12:48:05] 2026-02-08 17:47:05,967 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 12:48:05] 2026-02-08 17:47:05,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 12:48:05] 2026-02-08 17:47:05,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 12:48:05] 2026-02-08 17:47:05,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 12:48:05] 2026-02-08 17:47:05,970 | INFO     | fitting pss+swap vs Time
[2026-02-08 12:48:05] 2026-02-08 17:47:05,970 | INFO     | sum of square deviations: 329031285.5
[2026-02-08 12:48:05] 2026-02-08 17:47:05,970 | INFO     | sum of deviations: 9751735232.000004
[2026-02-08 12:48:05] 2026-02-08 17:47:05,970 | INFO     | mean x: 1770569734.5
[2026-02-08 12:48:05] 2026-02-08 17:47:05,970 | INFO     | mean y: 2688327.0392156863
[2026-02-08 12:48:05] 2026-02-08 17:47:05,971 | INFO     | intersect: -52472951593.94496
[2026-02-08 12:48:05] 2026-02-08 17:47:05,971 | INFO     | chi2: 2.195074561954847
[2026-02-08 12:48:05] 2026-02-08 17:47:05,971 | INFO     | sum of square deviations: 282974608.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,971 | INFO     | sum of deviations: 16170451448.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,972 | INFO     | mean x: 1770569582.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,972 | INFO     | mean y: 2708589.0824742266
[2026-02-08 12:48:05] 2026-02-08 17:47:05,972 | INFO     | intersect: -101175660959.31409
[2026-02-08 12:48:05] 2026-02-08 17:47:05,972 | INFO     | chi2: 1.4133833846765118
[2026-02-08 12:48:05] 2026-02-08 17:47:05,972 | INFO     | current chi2=1.4133833846765118 (change=35.611144642949704 %)
[2026-02-08 12:48:05] 2026-02-08 17:47:05,972 | INFO     | sum of square deviations: 241429643.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,973 | INFO     | sum of deviations: 14906321974.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,973 | INFO     | mean x: 1770569429.5
[2026-02-08 12:48:05] 2026-02-08 17:47:05,973 | INFO     | mean y: 2703944.695652174
[2026-02-08 12:48:05] 2026-02-08 17:47:05,973 | INFO     | intersect: -109315595438.48529
[2026-02-08 12:48:05] 2026-02-08 17:47:05,973 | INFO     | chi2: 1.4167333632097765
[2026-02-08 12:48:05] 2026-02-08 17:47:05,973 | INFO     | current chi2=1.4167333632097765 (change=-0.23701838931914515 %)
[2026-02-08 12:48:05] 2026-02-08 17:47:05,974 | INFO     | right removable region: 91
[2026-02-08 12:48:05] 2026-02-08 17:47:05,974 | INFO     | sum of square deviations: 282974608.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,974 | INFO     | sum of deviations: -6649519720.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,974 | INFO     | mean x: 1770569887.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,974 | INFO     | mean y: 2741507.474226804
[2026-02-08 12:48:05] 2026-02-08 17:47:05,975 | INFO     | intersect: 41608733870.02809
[2026-02-08 12:48:05] 2026-02-08 17:47:05,975 | INFO     | chi2: 0.8472164917181139
[2026-02-08 12:48:05] 2026-02-08 17:47:05,975 | INFO     | current chi2=0.8472164917181139 (change=61.40374881099182 %)
[2026-02-08 12:48:05] 2026-02-08 17:47:05,975 | INFO     | sum of square deviations: 241429643.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,975 | INFO     | sum of deviations: -3792367071.9999995
[2026-02-08 12:48:05] 2026-02-08 17:47:05,976 | INFO     | mean x: 1770570039.5
[2026-02-08 12:48:05] 2026-02-08 17:47:05,976 | INFO     | mean y: 2730950.1304347827
[2026-02-08 12:48:05] 2026-02-08 17:47:05,976 | INFO     | intersect: 27814773551.997425
[2026-02-08 12:48:05] 2026-02-08 17:47:05,976 | INFO     | chi2: 0.8249602276740553
[2026-02-08 12:48:05] 2026-02-08 17:47:05,976 | INFO     | current chi2=0.8249602276740553 (change=2.62698663937997 %)
[2026-02-08 12:48:05] 2026-02-08 17:47:05,976 | INFO     | left removable region: 20
[2026-02-08 12:48:05] 2026-02-08 17:47:05,976 | INFO     | sum of square deviations: 110960220.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,977 | INFO     | sum of deviations: 925557392.0000001
[2026-02-08 12:48:05] 2026-02-08 17:47:05,977 | INFO     | mean x: 1770570009.0
[2026-02-08 12:48:05] 2026-02-08 17:47:05,977 | INFO     | mean y: 2759371.591549296
[2026-02-08 12:48:05] 2026-02-08 17:47:05,977 | INFO     | intersect: -14766174575.037764
[2026-02-08 12:48:05] 2026-02-08 17:47:05,977 | INFO     | chi2: 0.0002510000010946521
[2026-02-08 12:48:05] 2026-02-08 17:47:05,977 | INFO     | current memory leak: 8.34 B/s (using 71 data points, chi2=0.00)
[2026-02-08 12:48:05] 2026-02-08 17:47:05,978 | INFO     | could have reported an average CPU frequency of 1773 MHz (7 samples)
[2026-02-08 12:48:05] 2026-02-08 17:47:05,978 | INFO     | ..............................
[2026-02-08 12:48:05] 2026-02-08 17:47:05,978 | INFO     | . Timing measurements:
[2026-02-08 12:48:05] 2026-02-08 17:47:05,978 | INFO     | . get job = 0 s
[2026-02-08 12:48:05] 2026-02-08 17:47:05,978 | INFO     | . initial setup = 7 s
[2026-02-08 12:48:05] 2026-02-08 17:47:05,978 | INFO     | . payload setup = 7 s
[2026-02-08 12:48:05] 2026-02-08 17:47:05,978 | INFO     | . stage-in = 0 s
[2026-02-08 12:48:05] 2026-02-08 17:47:05,978 | INFO     | . payload execution = 6168 s
[2026-02-08 12:48:05] 2026-02-08 17:47:05,979 | INFO     | . stage-out = 0 s
[2026-02-08 12:48:05] 2026-02-08 17:47:05,979 | INFO     | . log creation = 0 s
[2026-02-08 12:48:05] 2026-02-08 17:47:05,979 | INFO     | ..............................
[2026-02-08 12:48:05] 2026-02-08 17:47:06,273 | INFO     | 
[2026-02-08 12:48:05] 2026-02-08 17:47:06,274 | INFO     | job summary report
[2026-02-08 12:48:05] 2026-02-08 17:47:06,274 | INFO     | --------------------------------------------------
[2026-02-08 12:48:05] 2026-02-08 17:47:06,274 | INFO     | PanDA job id: 6992965137
[2026-02-08 12:48:05] 2026-02-08 17:47:06,274 | INFO     | task id: 48431096
[2026-02-08 12:48:05] 2026-02-08 17:47:06,274 | INFO     | errors: (none)
[2026-02-08 12:48:05] 2026-02-08 17:47:06,274 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 12:48:05] 2026-02-08 17:47:06,275 | INFO     | pilot state: finished 
[2026-02-08 12:48:05] 2026-02-08 17:47:06,275 | INFO     | transexitcode: 0
[2026-02-08 12:48:05] 2026-02-08 17:47:06,275 | INFO     | exeerrorcode: 0
[2026-02-08 12:48:05] 2026-02-08 17:47:06,275 | INFO     | exeerrordiag: 
[2026-02-08 12:48:05] 2026-02-08 17:47:06,275 | INFO     | exitcode: 0
[2026-02-08 12:48:05] 2026-02-08 17:47:06,275 | INFO     | exitmsg: OK
[2026-02-08 12:48:05] 2026-02-08 17:47:06,276 | INFO     | cpuconsumptiontime: 68794 s
[2026-02-08 12:48:05] 2026-02-08 17:47:06,276 | INFO     | nevents: 400
[2026-02-08 12:48:05] 2026-02-08 17:47:06,276 | INFO     | neventsw: 0
[2026-02-08 12:48:05] 2026-02-08 17:47:06,276 | INFO     | pid: 28091
[2026-02-08 12:48:05] 2026-02-08 17:47:06,276 | INFO     | pgrp: 28091
[2026-02-08 12:48:05] 2026-02-08 17:47:06,276 | INFO     | corecount: 12
[2026-02-08 12:48:05] 2026-02-08 17:47:06,276 | INFO     | event service: False
[2026-02-08 12:48:05] 2026-02-08 17:47:06,276 | INFO     | sizes: {0: 2282634, 1: 2283151, 12: 2283151, 6178: 2309931, 6179: 2309930, 6180: 2318984, 6183: 2319168, 6184: 2319362}
[2026-02-08 12:48:05] 2026-02-08 17:47:06,276 | INFO     | --------------------------------------------------
[2026-02-08 12:48:05] 2026-02-08 17:47:06,276 | INFO     | 
[2026-02-08 12:48:05] 2026-02-08 17:47:06,277 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-08 12:48:05] 2026-02-08 17:47:06,299 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,300 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,300 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,300 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,303 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 12:48:05] 2026-02-08 17:47:06,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,303 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 12:48:05] 2026-02-08 17:47:06,303 | INFO     | job 6992965137 has completed (purged errors)
[2026-02-08 12:48:05] 2026-02-08 17:47:06,303 | INFO     | overall cleanup function is called
[2026-02-08 12:48:05] 2026-02-08 17:47:07,312 | INFO     | --- collectZombieJob: --- 10, [28091]
[2026-02-08 12:48:05] 2026-02-08 17:47:07,312 | INFO     | zombie collector waiting for pid 28091
[2026-02-08 12:48:05] 2026-02-08 17:47:07,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 12:48:05] 2026-02-08 17:47:07,312 | INFO     | collected zombie processes
[2026-02-08 12:48:05] 2026-02-08 17:47:07,313 | INFO     | will attempt to kill all subprocesses of pid=28091
[2026-02-08 12:48:05] 2026-02-08 17:47:07,397 | INFO     | process IDs to be killed: [28091] (in reverse order)
[2026-02-08 12:48:05] 2026-02-08 17:47:07,448 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 12:48:05] 2026-02-08 17:47:07,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 12:48:05] 2026-02-08 17:47:07,452 | INFO     | did not find any defunct processes belonging to 28091
[2026-02-08 12:48:05] 2026-02-08 17:47:07,456 | INFO     | did not find any defunct processes belonging to 28091
[2026-02-08 12:48:05] 2026-02-08 17:47:07,456 | INFO     | ready for new job
[2026-02-08 12:48:05] 2026-02-08 17:47:07,456 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 12:48:05] 2026-02-08 17:47:07,457 | INFO     | **************************************
[2026-02-08 12:48:05] 2026-02-08 17:47:07,457 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 12:48:05] 2026-02-08 17:47:07,458 | INFO     | **************************************
[2026-02-08 12:48:05] 2026-02-08 17:47:07,458 | INFO     | 
[2026-02-08 12:48:05] 2026-02-08 17:47:07,458 | INFO     | architecture information:
[2026-02-08 12:48:05] 2026-02-08 17:47:07,459 | INFO     | executing command: cat /etc/os-release
[2026-02-08 12:48:05] 2026-02-08 17:47:07,473 | INFO     | cat /etc/os-release:
[2026-02-08 12:48:05] NAME="CentOS Linux"
[2026-02-08 12:48:05] VERSION="7 (Core)"
[2026-02-08 12:48:05] ID="centos"
[2026-02-08 12:48:05] ID_LIKE="rhel fedora"
[2026-02-08 12:48:05] VERSION_ID="7"
[2026-02-08 12:48:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 12:48:05] ANSI_COLOR="0;31"
[2026-02-08 12:48:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 12:48:05] HOME_URL="https://www.centos.org/"
[2026-02-08 12:48:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 12:48:05] 
[2026-02-08 12:48:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 12:48:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 12:48:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 12:48:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 12:48:05] 
[2026-02-08 12:48:05] 2026-02-08 17:47:07,473 | INFO     | **************************************
[2026-02-08 12:48:05] 2026-02-08 17:47:07,976 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-08 12:48:05] 2026-02-08 17:47:07,994 | INFO     | sufficient remaining disk space (28333572096 B)
[2026-02-08 12:48:05] 2026-02-08 17:47:07,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 12:48:05] 2026-02-08 17:47:07,995 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 12:48:05] 2026-02-08 17:47:07,995 | INFO     | update_server=False
[2026-02-08 12:48:05] 2026-02-08 17:47:07,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 12:48:05] 2026-02-08 17:47:07,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 12:48:05] 2026-02-08 17:47:07,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 12:48:05] 2026-02-08 17:47:08,116 | INFO     | all data control threads have been joined
[2026-02-08 12:48:05] 2026-02-08 17:47:08,291 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 12:48:05] 2026-02-08 17:47:08,291 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 12:48:05] 2026-02-08 17:47:08,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 12:48:05] 2026-02-08 17:47:08,308 | INFO     | will abort loop
[2026-02-08 12:48:05] 2026-02-08 17:47:08,549 | INFO     | all payload control threads have been joined
[2026-02-08 12:48:05] 2026-02-08 17:47:08,612 | INFO     | all job control threads have been joined
[2026-02-08 12:48:05] 2026-02-08 17:47:09,001 | INFO     | [job] retrieve thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:09,001 | INFO     | [job] queue monitor thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:09,120 | INFO     | [data] control thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:09,178 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:09,258 | INFO     | [data] copytool_in thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:09,309 | INFO     | [job] job monitor thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:09,336 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:09,554 | INFO     | [payload] control thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:09,586 | INFO     | [payload] validate_post thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:09,617 | INFO     | [job] control thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:10,001 | INFO     | [data] copytool_out thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:10,037 | INFO     | [job] validate thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:10,231 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:10,396 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:10,546 | INFO     | [payload] failed_post thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:11,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 12:48:05] 2026-02-08 17:47:15,195 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 12:48:05] 2026-02-08 17:47:38,622 | INFO     | PID=23657 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-08 12:48:05] 2026-02-08 17:47:38,623 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 12:48:05] 2026-02-08 17:47:38,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 12:48:05] 2026-02-08 17:47:38,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 12:48:05] 2026-02-08 17:47:59,745 | INFO     | [monitor] cgroup control has ended
[2026-02-08 12:48:05] 2026-02-08 17:47:59,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177473726272)>', '<ExcThread(monitor, started 140176902833920)>']
[2026-02-08 12:48:05] 2026-02-08 17:48:00,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 12:48:05] 2026-02-08 17:48:00,717 | INFO     | [monitor] control thread has ended
[2026-02-08 12:48:05] 2026-02-08 17:48:04,958 | INFO     | all workflow threads have been joined
[2026-02-08 12:48:05] 2026-02-08 17:48:04,958 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 12:48:05] 2026-02-08 17:48:04,959 | INFO     | traces error code: 0
[2026-02-08 12:48:05] 2026-02-08 17:48:04,959 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 12:48:05] 2026-02-08 17:48:05,040 [wrapper] ==== pilot stdout END ====
[2026-02-08 12:48:05] 2026-02-08 17:48:05,043 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 12:48:05] 2026-02-08 17:48:05,047 [wrapper] pilotpid: 23657
[2026-02-08 12:48:05] 2026-02-08 17:48:05,050 [wrapper] Pilot exit status: 0
[2026-02-08 12:48:05] 2026-02-08 17:48:05,066 [wrapper] pandaids: 6992965137
[2026-02-08 12:48:05] 2026-02-08 17:48:05,111 [wrapper] cleanup supervisor_pilot 25499 23658
[2026-02-08 12:48:05] 2026-02-08 17:48:05,115 [wrapper] Test setup, not cleaning
[2026-02-08 12:48:05] 2026-02-08 17:48:05,119 [wrapper] apfmon messages muted
[2026-02-08 12:48:05] 2026-02-08 17:48:05,123 [wrapper] ==== wrapper stdout END ====
[2026-02-08 12:48:05] 2026-02-08 17:48:05,127 [wrapper] ==== wrapper stderr END ====
[2026-02-08 12:48:05]  *** Error codes and diagnostics ***
[2026-02-08 12:48:05]     "exeErrorCode": 0,
[2026-02-08 12:48:05]     "exeErrorDiag": "",
[2026-02-08 12:48:05]     "pilotErrorCode": 0,
[2026-02-08 12:48:05]     "pilotErrorDiag": "",
[2026-02-08 12:48:05]  *** Listing of results directory ***
[2026-02-08 12:48:05] total 943796
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas    584627 Feb  8 05:56 pilot3.tar.gz
[2026-02-08 12:48:05] -rwx------ 1 boincer umatlas     36322 Feb  8 05:58 runpilot2-wrapper.sh
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas      5111 Feb  8 05:58 queuedata.json
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas       100 Feb  8 11:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 12:48:05] -rwxr-xr-x 1 boincer umatlas      7986 Feb  8 11:03 run_atlas
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas       105 Feb  8 11:03 job.xml
[2026-02-08 12:48:05] -rw-r--r-- 2 boincer umatlas 679940585 Feb  8 11:03 EVNT.48431094._000014.pool.root.1
[2026-02-08 12:48:05] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 11:03 start_atlas.sh
[2026-02-08 12:48:05] drwxrwx--x 2 boincer umatlas      4096 Feb  8 11:03 shared
[2026-02-08 12:48:05] -rw-r--r-- 2 boincer umatlas    597949 Feb  8 11:03 input.tar.gz
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas         0 Feb  8 11:03 boinc_lockfile
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas      2549 Feb  8 11:03 pandaJob.out
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas        57 Feb  8 11:03 setup.sh.local
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas   1009488 Feb  8 11:03 agis_schedconf.cvmfs.json
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas   1513088 Feb  8 11:03 agis_ddmendpoints.agis.ALL.json
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas       432 Feb  8 11:03 workernode_map.json
[2026-02-08 12:48:05] drwx------ 5 boincer umatlas      4096 Feb  8 11:03 pilot3
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas 279953391 Feb  8 12:46 HITS.48431096._000673.pool.root.1
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas       530 Feb  8 12:46 boinc_task_state.xml
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas      5952 Feb  8 12:46 init_data.xml
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas      1047 Feb  8 12:46 memory_monitor_summary.json
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas    419134 Feb  8 12:47 log.48431096._000673.job.log.tgz.1
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas      6398 Feb  8 12:47 heartbeat.json
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas        95 Feb  8 12:47 pilot_heartbeat.json
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas      8192 Feb  8 12:47 boinc_mmap_file
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas        27 Feb  8 12:47 wrapper_checkpoint.txt
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas      4928 Feb  8 12:48 pilotlog.txt
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas    884001 Feb  8 12:48 log.48431096._000673.job.log.1
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas       357 Feb  8 12:48 output.list
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas       620 Feb  8 12:48 runtime_log
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas   1320960 Feb  8 12:48 result.tar.gz
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas      9338 Feb  8 12:48 runtime_log.err
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas       659 Feb  8 12:48 1ARKDmzfH98n9Rq4apOajLDm4fhM0noT9bVooX4SDmR0cKDmlnGeKo.diag
[2026-02-08 12:48:05] -rw-r--r-- 1 boincer umatlas     21041 Feb  8 12:48 stderr.txt
[2026-02-08 12:48:05] HITS file was successfully produced:
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas 279953391 Feb  8 12:46 shared/HITS.pool.root.1
[2026-02-08 12:48:05]  *** Contents of shared directory: ***
[2026-02-08 12:48:05] total 939300
[2026-02-08 12:48:05] -rw-r--r-- 2 boincer umatlas 679940585 Feb  8 11:03 ATLAS.root_0
[2026-02-08 12:48:05] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 11:03 start_atlas.sh
[2026-02-08 12:48:05] -rw-r--r-- 2 boincer umatlas    597949 Feb  8 11:03 input.tar.gz
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas 279953391 Feb  8 12:46 HITS.pool.root.1
[2026-02-08 12:48:05] -rw------- 1 boincer umatlas   1320960 Feb  8 12:48 result.tar.gz
12:48:06 (19687): run_atlas exited; CPU time 68778.057307
12:48:06 (19687): called boinc_finish(0)

</stderr_txt>
]]>

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