Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:46:02 (410788): wrapper (7.7.26015): starting
02:46:02 (410788): wrapper: running run_atlas (--nthreads 3)
[2026-02-09 02:46:02] Arguments: --nthreads 3
[2026-02-09 02:46:02] Threads: 3
[2026-02-09 02:46:02] Checking for CVMFS
[2026-02-09 02:46:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 02:46:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 02:46:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 02:46:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 02:46:04] 2.9.2.0 4008882 4007 83044 156039 1 50 36320868 36864000 0 130560 0 1685844 99.983 149836 6476 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 02:46:04] CVMFS is ok
[2026-02-09 02:46:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 02:46:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 02:46:04] Further information can be found at the LHC@home message board.
[2026-02-09 02:46:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 02:46:04] Checking for apptainer binary...
[2026-02-09 02:46:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 02:46:04] Running /usr/bin/apptainer --version
[2026-02-09 02:46:04] apptainer version 1.4.1-1.1
[2026-02-09 02:46:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 02:46:04] belleA263b
[2026-02-09 02:46:04] apptainer works
[2026-02-09 02:46:04] Set ATHENA_PROC_NUMBER=3
[2026-02-09 02:46:04] Set ATHENA_CORE_NUMBER=3
[2026-02-09 02:46:04] Starting ATLAS job with PandaID=7007317569
[2026-02-09 02:46:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 04:45:29]  *** The last 200 lines of the pilot log: ***
[2026-02-09 04:45:29] 2026-02-09 03:44:22,115 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 04:45:29] 2026-02-09 03:44:22,115 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 04:45:29] 2026-02-09 03:44:22,115 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 04:45:29] 2026-02-09 03:44:22,115 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 04:45:29] 2026-02-09 03:44:22,116 | INFO     | fitting pss+swap vs Time
[2026-02-09 04:45:29] 2026-02-09 03:44:22,116 | INFO     | sum of square deviations: 483971865.0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | sum of deviations: -6930514206.999999
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | mean x: 1770605099.5
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | mean y: 2421527.9310344825
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | intersect: 25357622283.39519
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | chi2: 1.6181425970967118
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | sum of square deviations: 424045160.0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | sum of deviations: -6200102647.0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | mean x: 1770604947.0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | mean y: 2423387.918918919
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | intersect: 25891016052.638863
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | chi2: 1.6172443328278503
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | current chi2=1.6172443328278503 (change=0.055512058731610005 %)
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | right removable region: 110
[2026-02-09 04:45:29] 2026-02-09 03:44:22,117 | INFO     | sum of square deviations: 424045160.0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | sum of deviations: -21401057670.999996
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | mean x: 1770605252.0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | mean y: 2457381.918918919
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | intersect: 89362810205.25377
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | chi2: 0.15117563217081767
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | current chi2=0.15117563217081767 (change=90.65745921020442 %)
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | sum of square deviations: 369281342.5
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | sum of deviations: -16645349685.000002
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | mean x: 1770605404.5
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | mean y: 2444117.396226415
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | intersect: 79812449985.89844
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | chi2: 0.1386686393818615
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | current chi2=0.1386686393818615 (change=8.273153953028729 %)
[2026-02-09 04:45:29] 2026-02-09 03:44:22,118 | INFO     | left removable region: 20
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | sum of square deviations: 226022842.5
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | sum of deviations: -5700972312.499998
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | mean x: 1770605526.5
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | mean y: 2412565.988888889
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | intersect: 44662381316.43048
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | chi2: 0.055139343444247
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | current memory leak: -25.22 B/s (using 90 data points, chi2=0.06)
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | could have reported an average CPU frequency of 3880 MHz (7 samples)
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | ..............................
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | . Timing measurements:
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | . get job = 0 s
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | . initial setup = 3 s
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | . payload setup = 3 s
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | . stage-in = 0 s
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | . payload execution = 7066 s
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | . stage-out = 0 s
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | . log creation = 0 s
[2026-02-09 04:45:29] 2026-02-09 03:44:22,119 | INFO     | ..............................
[2026-02-09 04:45:29] 2026-02-09 03:44:22,524 | INFO     | 
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | job summary report
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | --------------------------------------------------
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | PanDA job id: 7007317569
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | task id: 48431096
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | errors: (none)
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | pilot state: finished 
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | transexitcode: 0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | exeerrorcode: 0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | exeerrordiag: 
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | exitcode: 0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | exitmsg: OK
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | cpuconsumptiontime: 20526 s
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | nevents: 400
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | neventsw: 0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | pid: 419269
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | pgrp: 419269
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | corecount: 3
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | event service: False
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | sizes: {0: 2282656, 1: 2283117, 11: 2283117, 7073: 2319565, 7074: 2319565, 7077: 2319759}
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | --------------------------------------------------
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | 
[2026-02-09 04:45:29] 2026-02-09 03:44:22,525 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 04:45:29] 2026-02-09 03:44:22,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,543 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 04:45:29] 2026-02-09 03:44:22,543 | INFO     | job 7007317569 has completed (purged errors)
[2026-02-09 04:45:29] 2026-02-09 03:44:22,543 | INFO     | overall cleanup function is called
[2026-02-09 04:45:29] 2026-02-09 03:44:23,547 | INFO     | --- collectZombieJob: --- 10, [419269]
[2026-02-09 04:45:29] 2026-02-09 03:44:23,547 | INFO     | zombie collector waiting for pid 419269
[2026-02-09 04:45:29] 2026-02-09 03:44:23,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 04:45:29] 2026-02-09 03:44:23,547 | INFO     | collected zombie processes
[2026-02-09 04:45:29] 2026-02-09 03:44:23,547 | INFO     | will attempt to kill all subprocesses of pid=419269
[2026-02-09 04:45:29] 2026-02-09 03:44:23,595 | INFO     | process IDs to be killed: [419269] (in reverse order)
[2026-02-09 04:45:29] 2026-02-09 03:44:23,621 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 04:45:29] 2026-02-09 03:44:23,621 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 04:45:29] 2026-02-09 03:44:23,623 | INFO     | did not find any defunct processes belonging to 419269
[2026-02-09 04:45:29] 2026-02-09 03:44:23,624 | INFO     | did not find any defunct processes belonging to 419269
[2026-02-09 04:45:29] 2026-02-09 03:44:23,624 | INFO     | ready for new job
[2026-02-09 04:45:29] 2026-02-09 03:44:23,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 04:45:29] 2026-02-09 03:44:23,625 | INFO     | **************************************
[2026-02-09 04:45:29] 2026-02-09 03:44:23,625 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 04:45:29] 2026-02-09 03:44:23,625 | INFO     | **************************************
[2026-02-09 04:45:29] 2026-02-09 03:44:23,625 | INFO     | 
[2026-02-09 04:45:29] 2026-02-09 03:44:23,625 | INFO     | architecture information:
[2026-02-09 04:45:29] 2026-02-09 03:44:23,625 | INFO     | executing command: cat /etc/os-release
[2026-02-09 04:45:29] 2026-02-09 03:44:23,634 | INFO     | cat /etc/os-release:
[2026-02-09 04:45:29] NAME="CentOS Linux"
[2026-02-09 04:45:29] VERSION="7 (Core)"
[2026-02-09 04:45:29] ID="centos"
[2026-02-09 04:45:29] ID_LIKE="rhel fedora"
[2026-02-09 04:45:29] VERSION_ID="7"
[2026-02-09 04:45:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 04:45:29] ANSI_COLOR="0;31"
[2026-02-09 04:45:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 04:45:29] HOME_URL="https://www.centos.org/"
[2026-02-09 04:45:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 04:45:29] 
[2026-02-09 04:45:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 04:45:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 04:45:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 04:45:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 04:45:29] 
[2026-02-09 04:45:29] 2026-02-09 03:44:23,634 | INFO     | **************************************
[2026-02-09 04:45:29] 2026-02-09 03:44:24,138 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-09 04:45:29] 2026-02-09 03:44:24,151 | INFO     | sufficient remaining disk space (363922980864 B)
[2026-02-09 04:45:29] 2026-02-09 03:44:24,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 04:45:29] 2026-02-09 03:44:24,151 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 04:45:29] 2026-02-09 03:44:24,151 | INFO     | update_server=False
[2026-02-09 04:45:29] 2026-02-09 03:44:24,151 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 04:45:29] 2026-02-09 03:44:24,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 04:45:29] 2026-02-09 03:44:24,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 04:45:29] 2026-02-09 03:44:24,513 | INFO     | all job control threads have been joined
[2026-02-09 04:45:29] 2026-02-09 03:44:24,812 | INFO     | all data control threads have been joined
[2026-02-09 04:45:29] 2026-02-09 03:44:24,861 | WARNING  | process 419269 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 04:45:29] 2026-02-09 03:44:24,864 | INFO     | all payload control threads have been joined
[2026-02-09 04:45:29] 2026-02-09 03:44:24,894 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 04:45:29] 2026-02-09 03:44:24,894 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 04:45:29] 2026-02-09 03:44:24,894 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-09 04:45:29] 2026-02-09 03:44:24,894 | WARNING  | maxPSS not found in memory monitor output
[2026-02-09 04:45:29] 2026-02-09 03:44:24,894 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7007317569/payload.stdout) since it has not been created yet
[2026-02-09 04:45:29] 2026-02-09 03:44:24,895 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-09 04:45:29] 2026-02-09 03:44:24,905 | INFO     | sufficient remaining disk space (363922980864 B)
[2026-02-09 04:45:29] 2026-02-09 03:44:24,905 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-09 04:45:29] 2026-02-09 03:44:24,905 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7007317569/HITS.48431096._010464.pool.root.1 since it does not exist
[2026-02-09 04:45:29] 2026-02-09 03:44:24,948 | INFO     | number of running child processes to parent process 419269: 1
[2026-02-09 04:45:29] 2026-02-09 03:44:24,949 | INFO     | maximum number of monitored processes: 6
[2026-02-09 04:45:29] 2026-02-09 03:44:24,949 | INFO     | aborting job monitoring since job object (job id=7007317569) has expired
[2026-02-09 04:45:29] 2026-02-09 03:44:24,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 04:45:29] 2026-02-09 03:44:24,949 | INFO     | will abort loop
[2026-02-09 04:45:29] 2026-02-09 03:44:25,154 | INFO     | [job] retrieve thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:25,157 | INFO     | [job] queue monitor thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:25,263 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:25,344 | INFO     | [data] copytool_in thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:25,519 | INFO     | [job] control thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:25,696 | INFO     | [payload] validate_post thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:25,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 04:45:29] 2026-02-09 03:44:25,818 | INFO     | [data] control thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:25,845 | INFO     | [payload] failed_post thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:25,870 | INFO     | [payload] control thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:25,954 | INFO     | [job] job monitor thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:26,196 | INFO     | [data] copytool_out thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:26,535 | INFO     | [job] validate thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:26,597 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:26,655 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:29,795 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:35,018 | INFO     | job.realtimelogging is not enabled
[2026-02-09 04:45:29] 2026-02-09 03:44:36,024 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 04:45:29] 2026-02-09 03:44:53,765 | INFO     | PID=414839 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 04:45:29] 2026-02-09 03:44:53,766 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 04:45:29] 2026-02-09 03:44:53,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 04:45:29] 2026-02-09 03:44:53,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 04:45:29] 2026-02-09 03:45:22,690 | INFO     | [monitor] cgroup control has ended
[2026-02-09 04:45:29] 2026-02-09 03:45:24,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993000695616)>', '<ExcThread(monitor, started 139991774656256)>']
[2026-02-09 04:45:29] 2026-02-09 03:45:24,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 04:45:29] 2026-02-09 03:45:24,931 | INFO     | [monitor] control thread has ended
[2026-02-09 04:45:29] 2026-02-09 03:45:29,475 | INFO     | all workflow threads have been joined
[2026-02-09 04:45:29] 2026-02-09 03:45:29,475 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 04:45:29] 2026-02-09 03:45:29,475 | INFO     | traces error code: 0
[2026-02-09 04:45:29] 2026-02-09 03:45:29,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 04:45:29] 2026-02-09 03:45:29,526 [wrapper] ==== pilot stdout END ====
[2026-02-09 04:45:29] 2026-02-09 03:45:29,529 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 04:45:29] 2026-02-09 03:45:29,531 [wrapper] pilotpid: 414839
[2026-02-09 04:45:29] 2026-02-09 03:45:29,534 [wrapper] Pilot exit status: 0
[2026-02-09 04:45:29] 2026-02-09 03:45:29,542 [wrapper] pandaids: 7007317569
[2026-02-09 04:45:29] 2026-02-09 03:45:29,561 [wrapper] cleanup supervisor_pilot  424661 414840
[2026-02-09 04:45:29] 2026-02-09 03:45:29,564 [wrapper] Test setup, not cleaning
[2026-02-09 04:45:29] 2026-02-09 03:45:29,566 [wrapper] apfmon messages muted
[2026-02-09 04:45:29] 2026-02-09 03:45:29,569 [wrapper] ==== wrapper stdout END ====
[2026-02-09 04:45:29] 2026-02-09 03:45:29,571 [wrapper] ==== wrapper stderr END ====
[2026-02-09 04:45:29]  *** Error codes and diagnostics ***
[2026-02-09 04:45:29]     "exeErrorCode": 0,
[2026-02-09 04:45:29]     "exeErrorDiag": "",
[2026-02-09 04:45:29]     "pilotErrorCode": 0,
[2026-02-09 04:45:29]     "pilotErrorDiag": "",
[2026-02-09 04:45:29]  *** Listing of results directory ***
[2026-02-09 04:45:29] total 947976
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc    584627 Feb  8 06:10 pilot3.tar.gz
[2026-02-09 04:45:29] -rwx------ 1 boinc boinc     36322 Feb  8 06:13 runpilot2-wrapper.sh
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc      5111 Feb  8 06:15 queuedata.json
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc       100 Feb  9 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 04:45:29] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 02:46 run_atlas
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc       105 Feb  9 02:46 job.xml
[2026-02-09 04:45:29] -rw-r--r-- 2 boinc boinc 681020669 Feb  9 02:46 EVNT.48431094._000430.pool.root.1
[2026-02-09 04:45:29] -rw-r--r-- 2 boinc boinc    597966 Feb  9 02:46 input.tar.gz
[2026-02-09 04:45:29] -rw-r--r-- 2 boinc boinc     15845 Feb  9 02:46 start_atlas.sh
[2026-02-09 04:45:29] drwxrwx--x 2 boinc boinc      4096 Feb  9 02:46 shared
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc         0 Feb  9 02:46 boinc_setup_complete
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc      6449 Feb  9 02:46 init_data.xml
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc         0 Feb  9 02:46 boinc_lockfile
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc      2556 Feb  9 02:46 pandaJob.out
[2026-02-09 04:45:29] -rw------- 1 boinc boinc   1009504 Feb  9 02:46 agis_schedconf.cvmfs.json
[2026-02-09 04:45:29] -rw------- 1 boinc boinc   1513088 Feb  9 02:46 agis_ddmendpoints.agis.ALL.json
[2026-02-09 04:45:29] -rw------- 1 boinc boinc       427 Feb  9 02:46 workernode_map.json
[2026-02-09 04:45:29] drwx------ 5 boinc boinc      4096 Feb  9 02:46 pilot3
[2026-02-09 04:45:29] -rw------- 1 boinc boinc 283075780 Feb  9 04:43 HITS.48431096._010464.pool.root.1
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc       530 Feb  9 04:44 boinc_task_state.xml
[2026-02-09 04:45:29] -rw------- 1 boinc boinc      1020 Feb  9 04:44 memory_monitor_summary.json
[2026-02-09 04:45:29] -rw------- 1 boinc boinc    324391 Feb  9 04:44 log.48431096._010464.job.log.tgz.1
[2026-02-09 04:45:29] -rw------- 1 boinc boinc      6316 Feb  9 04:44 heartbeat.json
[2026-02-09 04:45:29] -rw------- 1 boinc boinc        95 Feb  9 04:44 pilot_heartbeat.json
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc        27 Feb  9 04:45 wrapper_checkpoint.txt
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc      8192 Feb  9 04:45 boinc_mmap_file
[2026-02-09 04:45:29] -rw------- 1 boinc boinc      6318 Feb  9 04:45 pilotlog.txt
[2026-02-09 04:45:29] -rw------- 1 boinc boinc   1017114 Feb  9 04:45 log.48431096._010464.job.log.1
[2026-02-09 04:45:29] -rw------- 1 boinc boinc       357 Feb  9 04:45 output.list
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc       620 Feb  9 04:45 runtime_log
[2026-02-09 04:45:29] -rw------- 1 boinc boinc   1361920 Feb  9 04:45 result.tar.gz
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc      8916 Feb  9 04:45 runtime_log.err
[2026-02-09 04:45:29] -rw------- 1 boinc boinc       661 Feb  9 04:45 CCRNDm3HC98n9Rq4apOajLDm4fhM0noT9bVooX4SDmlVcKDme90Lln.diag
[2026-02-09 04:45:29] -rw-r--r-- 1 boinc boinc     21431 Feb  9 04:45 stderr.txt
[2026-02-09 04:45:29] HITS file was successfully produced:
[2026-02-09 04:45:29] -rw------- 1 boinc boinc 283075780 Feb  9 04:43 shared/HITS.pool.root.1
[2026-02-09 04:45:29]  *** Contents of shared directory: ***
[2026-02-09 04:45:29] total 943444
[2026-02-09 04:45:29] -rw-r--r-- 2 boinc boinc 681020669 Feb  9 02:46 ATLAS.root_0
[2026-02-09 04:45:29] -rw-r--r-- 2 boinc boinc    597966 Feb  9 02:46 input.tar.gz
[2026-02-09 04:45:29] -rw-r--r-- 2 boinc boinc     15845 Feb  9 02:46 start_atlas.sh
[2026-02-09 04:45:29] -rw------- 1 boinc boinc 283075780 Feb  9 04:43 HITS.pool.root.1
[2026-02-09 04:45:29] -rw------- 1 boinc boinc   1361920 Feb  9 04:45 result.tar.gz
04:45:31 (410788): run_atlas exited; CPU time 20566.460897
04:45:31 (410788): called boinc_finish(0)

</stderr_txt>
]]>

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