Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:59:52 (925744): wrapper (7.7.26015): starting
13:59:52 (925744): wrapper: running run_atlas (--nthreads 3)
[2026-02-08 13:59:52] Arguments: --nthreads 3
[2026-02-08 13:59:52] Threads: 3
[2026-02-08 13:59:52] Checking for CVMFS
[2026-02-08 13:59:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 13:59:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 13:59:56] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 13:59:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 13:59:56] 2.9.2.0 883395 302 55796 156020 2 49 24932819 36864001 0 130560 0 120670 99.983 9650 673 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-08 13:59:56] CVMFS is ok
[2026-02-08 13:59:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 13:59:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 13:59:56] Further information can be found at the LHC@home message board.
[2026-02-08 13:59:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 13:59:56] Checking for apptainer binary...
[2026-02-08 13:59:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 13:59:56] Running /usr/bin/apptainer --version
[2026-02-08 13:59:56] apptainer version 1.4.5-1.1
[2026-02-08 13:59:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 13:59:56] belleA265
[2026-02-08 13:59:56] apptainer works
[2026-02-08 13:59:56] Set ATHENA_PROC_NUMBER=3
[2026-02-08 13:59:56] Set ATHENA_CORE_NUMBER=3
[2026-02-08 13:59:56] Starting ATLAS job with PandaID=7003988577
[2026-02-08 13:59:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 15:39:31]  *** The last 200 lines of the pilot log: ***
[2026-02-08 15:39:31]  domain=
[2026-02-08 15:39:31]  filesize=282984
[2026-02-08 15:39:31]  filetype=log
[2026-02-08 15:39:31]  guid=2a9b2e31-8005-4352-af4b-ce70ec37d182
[2026-02-08 15:39:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 15:39:31]  is_altstaged=None
[2026-02-08 15:39:31]  is_tar=False
[2026-02-08 15:39:31]  lfn=log.48318042._013020.job.log.tgz.1
[2026-02-08 15:39:31]  mtime=0
[2026-02-08 15:39:31]  protocol_id=None
[2026-02-08 15:39:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 15:39:31]  replicas=None
[2026-02-08 15:39:31]  scope=mc23_13p6TeV
[2026-02-08 15:39:31]  status=None
[2026-02-08 15:39:31]  status_code=0
[2026-02-08 15:39:31]  storage_token=
[2026-02-08 15:39:31]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7003988577/log.48318042._013020.job.log.tgz.1
[2026-02-08 15:39:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/df/log.48318042._013020.job.log.tgz.1
[2026-02-08 15:39:31]  workdir=None
[2026-02-08 15:39:31] ]
[2026-02-08 15:39:31] 2026-02-08 14:38:43,473 | INFO     | transferring file log.48318042._013020.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7003988577/log.48318042._013020.job.log.tgz.1 to /local/data/boinc/
[2026-02-08 15:39:31] 2026-02-08 14:38:43,473 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7003988577/log.48318042._013020.job.log.tgz.1 /local/data/boinc/slots/0/log.48318042._0130
[2026-02-08 15:39:31] 2026-02-08 14:38:43,486 | INFO     | adding to output.list: log.48318042._013020.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/df/log.48318042._013020.job.log.tg
[2026-02-08 15:39:31] 2026-02-08 14:38:43,487 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 15:39:31] 2026-02-08 14:38:43,487 | INFO     | summary of transferred files:
[2026-02-08 15:39:31] 2026-02-08 14:38:43,487 | INFO     |  -- lfn=log.48318042._013020.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 15:39:31] 2026-02-08 14:38:43,487 | INFO     | stage-out finished correctly
[2026-02-08 15:39:31] 2026-02-08 14:38:43,970 | INFO     | monitor loop #455: job 0:7003988577 is in state 'finished'
[2026-02-08 15:39:31] 2026-02-08 14:38:43,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 15:39:31] 2026-02-08 14:38:45,295 | INFO     | time since job start (5909s) is within the limit (349056.0s)
[2026-02-08 15:39:31] 2026-02-08 14:38:45,864 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 15:39:31] 2026-02-08 14:38:46,156 | INFO     | job 7003988577 has state=finished
[2026-02-08 15:39:31] 2026-02-08 14:38:46,156 | INFO     | preparing for final server update for job 7003988577 in state='finished'
[2026-02-08 15:39:31] 2026-02-08 14:38:46,157 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7003988577/jobReport.json
[2026-02-08 15:39:31] 2026-02-08 14:38:46,161 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-08 15:39:31] 2026-02-08 14:38:46,162 | INFO     | this job has now completed (state=finished)
[2026-02-08 15:39:31] 2026-02-08 14:38:46,162 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 15:39:31] 2026-02-08 14:38:46,162 | INFO     | log transfer has been attempted: DONE
[2026-02-08 15:39:31] 2026-02-08 14:38:46,162 | INFO     | job 7003988577 has finished - writing final server update
[2026-02-08 15:39:31] 2026-02-08 14:38:46,162 | INFO     | total number of processed events: 400 (read)
[2026-02-08 15:39:31] 2026-02-08 14:38:46,163 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7003988577/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 15:39:31] 2026-02-08 14:38:46,163 | INFO     | extracted standard info from prmon json
[2026-02-08 15:39:31] 2026-02-08 14:38:46,163 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 15:39:31] 2026-02-08 14:38:46,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 15:39:31] 2026-02-08 14:38:46,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 15:39:31] 2026-02-08 14:38:46,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 15:39:31] 2026-02-08 14:38:46,164 | INFO     | fitting pss+swap vs Time
[2026-02-08 15:39:31] 2026-02-08 14:38:46,164 | INFO     | sum of square deviations: 226022842.5
[2026-02-08 15:39:31] 2026-02-08 14:38:46,164 | INFO     | sum of deviations: -6863604954.0
[2026-02-08 15:39:31] 2026-02-08 14:38:46,164 | INFO     | mean x: 1770558654.5
[2026-02-08 15:39:31] 2026-02-08 14:38:46,164 | INFO     | mean y: 2390143.511111111
[2026-02-08 15:39:31] 2026-02-08 14:38:46,164 | INFO     | intersect: 53768704282.19722
[2026-02-08 15:39:31] 2026-02-08 14:38:46,164 | INFO     | chi2: 0.13505815532567775
[2026-02-08 15:39:31] 2026-02-08 14:38:46,164 | INFO     | current memory leak: -30.37 B/s (using 90 data points, chi2=0.14)
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | could have reported an average CPU frequency of 4082 MHz (7 samples)
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | ..............................
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | . Timing measurements:
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | . get job = 0 s
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | . initial setup = 8 s
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | . payload setup = 4 s
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | . stage-in = 0 s
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | . payload execution = 5886 s
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | . stage-out = 0 s
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | . log creation = 0 s
[2026-02-08 15:39:31] 2026-02-08 14:38:46,165 | INFO     | ..............................
[2026-02-08 15:39:31] 2026-02-08 14:38:46,195 | INFO     | 
[2026-02-08 15:39:31] 2026-02-08 14:38:46,195 | INFO     | job summary report
[2026-02-08 15:39:31] 2026-02-08 14:38:46,195 | INFO     | --------------------------------------------------
[2026-02-08 15:39:31] 2026-02-08 14:38:46,195 | INFO     | PanDA job id: 7003988577
[2026-02-08 15:39:31] 2026-02-08 14:38:46,195 | INFO     | task id: 48318042
[2026-02-08 15:39:31] 2026-02-08 14:38:46,195 | INFO     | errors: (none)
[2026-02-08 15:39:31] 2026-02-08 14:38:46,195 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 15:39:31] 2026-02-08 14:38:46,195 | INFO     | pilot state: finished 
[2026-02-08 15:39:31] 2026-02-08 14:38:46,195 | INFO     | transexitcode: 0
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | exeerrorcode: 0
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | exeerrordiag: 
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | exitcode: 0
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | exitmsg: OK
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | cpuconsumptiontime: 16773 s
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | nevents: 400
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | neventsw: 0
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | pid: 934258
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | pgrp: 934258
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | corecount: 3
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | event service: False
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | sizes: {0: 2283103, 11: 2283103, 5895: 2309889, 5896: 2318893, 5899: 2319143}
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | --------------------------------------------------
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | 
[2026-02-08 15:39:31] 2026-02-08 14:38:46,196 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,216 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,217 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,217 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,217 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,217 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 15:39:31] 2026-02-08 14:38:46,217 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,217 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 15:39:31] 2026-02-08 14:38:46,217 | INFO     | job 7003988577 has completed (purged errors)
[2026-02-08 15:39:31] 2026-02-08 14:38:46,217 | INFO     | overall cleanup function is called
[2026-02-08 15:39:31] 2026-02-08 14:38:47,223 | INFO     | --- collectZombieJob: --- 10, [934258]
[2026-02-08 15:39:31] 2026-02-08 14:38:47,224 | INFO     | zombie collector waiting for pid 934258
[2026-02-08 15:39:31] 2026-02-08 14:38:47,224 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 15:39:31] 2026-02-08 14:38:47,224 | INFO     | collected zombie processes
[2026-02-08 15:39:31] 2026-02-08 14:38:47,224 | INFO     | will attempt to kill all subprocesses of pid=934258
[2026-02-08 15:39:31] 2026-02-08 14:38:47,260 | INFO     | process IDs to be killed: [934258] (in reverse order)
[2026-02-08 15:39:31] 2026-02-08 14:38:47,286 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 15:39:31] 2026-02-08 14:38:47,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 15:39:31] 2026-02-08 14:38:47,287 | INFO     | did not find any defunct processes belonging to 934258
[2026-02-08 15:39:31] 2026-02-08 14:38:47,288 | INFO     | did not find any defunct processes belonging to 934258
[2026-02-08 15:39:31] 2026-02-08 14:38:47,288 | INFO     | ready for new job
[2026-02-08 15:39:31] 2026-02-08 14:38:47,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 15:39:31] 2026-02-08 14:38:47,289 | INFO     | **************************************
[2026-02-08 15:39:31] 2026-02-08 14:38:47,289 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 15:39:31] 2026-02-08 14:38:47,289 | INFO     | **************************************
[2026-02-08 15:39:31] 2026-02-08 14:38:47,289 | INFO     | 
[2026-02-08 15:39:31] 2026-02-08 14:38:47,289 | INFO     | architecture information:
[2026-02-08 15:39:31] 2026-02-08 14:38:47,289 | INFO     | executing command: cat /etc/os-release
[2026-02-08 15:39:31] 2026-02-08 14:38:47,299 | INFO     | cat /etc/os-release:
[2026-02-08 15:39:31] NAME="CentOS Linux"
[2026-02-08 15:39:31] VERSION="7 (Core)"
[2026-02-08 15:39:31] ID="centos"
[2026-02-08 15:39:31] ID_LIKE="rhel fedora"
[2026-02-08 15:39:31] VERSION_ID="7"
[2026-02-08 15:39:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 15:39:31] ANSI_COLOR="0;31"
[2026-02-08 15:39:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 15:39:31] HOME_URL="https://www.centos.org/"
[2026-02-08 15:39:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 15:39:31] 
[2026-02-08 15:39:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 15:39:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 15:39:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 15:39:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 15:39:31] 
[2026-02-08 15:39:31] 2026-02-08 14:38:47,300 | INFO     | **************************************
[2026-02-08 15:39:31] 2026-02-08 14:38:47,803 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-08 15:39:31] 2026-02-08 14:38:47,815 | INFO     | sufficient remaining disk space (330622304256 B)
[2026-02-08 15:39:31] 2026-02-08 14:38:47,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 15:39:31] 2026-02-08 14:38:47,816 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 15:39:31] 2026-02-08 14:38:47,816 | INFO     | update_server=False
[2026-02-08 15:39:31] 2026-02-08 14:38:47,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 15:39:31] 2026-02-08 14:38:47,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 15:39:31] 2026-02-08 14:38:47,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 15:39:31] 2026-02-08 14:38:47,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 15:39:31] 2026-02-08 14:38:47,816 | INFO     | aborting loop
[2026-02-08 15:39:31] 2026-02-08 14:38:48,138 | INFO     | all payload control threads have been joined
[2026-02-08 15:39:31] 2026-02-08 14:38:48,266 | INFO     | all data control threads have been joined
[2026-02-08 15:39:31] 2026-02-08 14:38:48,821 | INFO     | [job] retrieve thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:48,822 | INFO     | [job] queue monitor thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:48,822 | INFO     | [job] job monitor thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:48,906 | INFO     | [payload] failed_post thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:49,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 15:39:31] 2026-02-08 14:38:49,042 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:49,144 | INFO     | [payload] control thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:49,237 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:49,266 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:49,272 | INFO     | [data] control thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:49,378 | INFO     | all job control threads have been joined
[2026-02-08 15:39:31] 2026-02-08 14:38:49,471 | INFO     | [payload] validate_post thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:49,721 | INFO     | [job] validate thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:49,906 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:50,030 | INFO     | [data] copytool_in thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:50,384 | INFO     | [job] control thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:51,033 | INFO     | [data] copytool_out thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:38:51,823 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 15:39:31] 2026-02-08 14:39:17,362 | INFO     | 5919s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-08 15:39:31] 2026-02-08 14:39:18,456 | INFO     | PID=929816 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-08 15:39:31] 2026-02-08 14:39:18,456 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 15:39:31] 2026-02-08 14:39:18,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 15:39:31] 2026-02-08 14:39:18,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 15:39:31] 2026-02-08 14:39:25,120 | INFO     | [monitor] cgroup control has ended
[2026-02-08 15:39:31] 2026-02-08 14:39:26,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241838593856)>', '<ExcThread(monitor, started 140241193125632)>']
[2026-02-08 15:39:31] 2026-02-08 14:39:27,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 15:39:31] 2026-02-08 14:39:27,494 | INFO     | [monitor] control thread has ended
[2026-02-08 15:39:31] 2026-02-08 14:39:31,660 | INFO     | all workflow threads have been joined
[2026-02-08 15:39:31] 2026-02-08 14:39:31,660 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 15:39:31] 2026-02-08 14:39:31,660 | INFO     | traces error code: 0
[2026-02-08 15:39:31] 2026-02-08 14:39:31,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 15:39:31] 2026-02-08 14:39:31,706 [wrapper] ==== pilot stdout END ====
[2026-02-08 15:39:31] 2026-02-08 14:39:31,708 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 15:39:31] 2026-02-08 14:39:31,711 [wrapper] pilotpid: 929816
[2026-02-08 15:39:31] 2026-02-08 14:39:31,713 [wrapper] Pilot exit status: 0
[2026-02-08 15:39:31] 2026-02-08 14:39:31,721 [wrapper] pandaids: 7003988577
[2026-02-08 15:39:31] 2026-02-08 14:39:31,738 [wrapper] cleanup supervisor_pilot  939610 929817
[2026-02-08 15:39:31] 2026-02-08 14:39:31,741 [wrapper] Test setup, not cleaning
[2026-02-08 15:39:31] 2026-02-08 14:39:31,744 [wrapper] apfmon messages muted
[2026-02-08 15:39:31] 2026-02-08 14:39:31,747 [wrapper] ==== wrapper stdout END ====
[2026-02-08 15:39:31] 2026-02-08 14:39:31,750 [wrapper] ==== wrapper stderr END ====
[2026-02-08 15:39:31]  *** Error codes and diagnostics ***
[2026-02-08 15:39:31]     "exeErrorCode": 0,
[2026-02-08 15:39:31]     "exeErrorDiag": "",
[2026-02-08 15:39:31]     "pilotErrorCode": 0,
[2026-02-08 15:39:31]     "pilotErrorDiag": "",
[2026-02-08 15:39:31]  *** Listing of results directory ***
[2026-02-08 15:39:31] total 681936
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc    584627 Feb  8 06:10 pilot3.tar.gz
[2026-02-08 15:39:31] -rwx------ 1 boinc boinc     36322 Feb  8 06:12 runpilot2-wrapper.sh
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc      5111 Feb  8 06:12 queuedata.json
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc       100 Feb  8 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 15:39:31] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 13:59 run_atlas
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc       105 Feb  8 13:59 job.xml
[2026-02-08 15:39:31] -rw-r--r-- 2 boinc boinc 504328846 Feb  8 13:59 EVNT.48318040._000078.pool.root.1
[2026-02-08 15:39:31] -rw-r--r-- 2 boinc boinc    597971 Feb  8 13:59 input.tar.gz
[2026-02-08 15:39:31] -rw-r--r-- 2 boinc boinc     15845 Feb  8 13:59 start_atlas.sh
[2026-02-08 15:39:31] drwxrwx--x 2 boinc boinc      4096 Feb  8 13:59 shared
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc         0 Feb  8 13:59 boinc_setup_complete
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc      6274 Feb  8 13:59 init_data.xml
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc         0 Feb  8 13:59 boinc_lockfile
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc      2535 Feb  8 13:59 pandaJob.out
[2026-02-08 15:39:31] -rw------- 1 boinc boinc   1009518 Feb  8 14:00 agis_schedconf.cvmfs.json
[2026-02-08 15:39:31] -rw------- 1 boinc boinc   1513088 Feb  8 14:00 agis_ddmendpoints.agis.ALL.json
[2026-02-08 15:39:31] -rw------- 1 boinc boinc       430 Feb  8 14:00 workernode_map.json
[2026-02-08 15:39:31] drwx------ 5 boinc boinc      4096 Feb  8 14:00 pilot3
[2026-02-08 15:39:31] -rw------- 1 boinc boinc 187751938 Feb  8 15:38 HITS.48318042._013020.pool.root.1
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc       530 Feb  8 15:38 boinc_task_state.xml
[2026-02-08 15:39:31] -rw------- 1 boinc boinc        95 Feb  8 15:38 pilot_heartbeat.json
[2026-02-08 15:39:31] -rw------- 1 boinc boinc      1021 Feb  8 15:38 memory_monitor_summary.json
[2026-02-08 15:39:31] -rw------- 1 boinc boinc    282984 Feb  8 15:38 log.48318042._013020.job.log.tgz.1
[2026-02-08 15:39:31] -rw------- 1 boinc boinc      6318 Feb  8 15:38 heartbeat.json
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc      8192 Feb  8 15:39 boinc_mmap_file
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc        27 Feb  8 15:39 wrapper_checkpoint.txt
[2026-02-08 15:39:31] -rw------- 1 boinc boinc      4862 Feb  8 15:39 pilotlog.txt
[2026-02-08 15:39:31] -rw------- 1 boinc boinc    856368 Feb  8 15:39 log.48318042._013020.job.log.1
[2026-02-08 15:39:31] -rw------- 1 boinc boinc       357 Feb  8 15:39 output.list
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc       620 Feb  8 15:39 runtime_log
[2026-02-08 15:39:31] -rw------- 1 boinc boinc   1157120 Feb  8 15:39 result.tar.gz
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc      8911 Feb  8 15:39 runtime_log.err
[2026-02-08 15:39:31] -rw------- 1 boinc boinc       660 Feb  8 15:39 VuFODmjGC98n9Rq4apOajLDm4fhM0noT9bVooX4SDmcScKDm8kPHVm.diag
[2026-02-08 15:39:31] -rw-r--r-- 1 boinc boinc     21120 Feb  8 15:39 stderr.txt
[2026-02-08 15:39:31] HITS file was successfully produced:
[2026-02-08 15:39:31] -rw------- 1 boinc boinc 187751938 Feb  8 15:38 shared/HITS.pool.root.1
[2026-02-08 15:39:31]  *** Contents of shared directory: ***
[2026-02-08 15:39:31] total 677600
[2026-02-08 15:39:31] -rw-r--r-- 2 boinc boinc 504328846 Feb  8 13:59 ATLAS.root_0
[2026-02-08 15:39:31] -rw-r--r-- 2 boinc boinc    597971 Feb  8 13:59 input.tar.gz
[2026-02-08 15:39:31] -rw-r--r-- 2 boinc boinc     15845 Feb  8 13:59 start_atlas.sh
[2026-02-08 15:39:31] -rw------- 1 boinc boinc 187751938 Feb  8 15:38 HITS.pool.root.1
[2026-02-08 15:39:31] -rw------- 1 boinc boinc   1157120 Feb  8 15:39 result.tar.gz
15:39:32 (925744): run_atlas exited; CPU time 16803.417444
15:39:32 (925744): called boinc_finish(0)

</stderr_txt>
]]>

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