Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:24:37 (10200): wrapper (7.7.26015): starting
02:24:37 (10200): wrapper: running run_atlas (--nthreads 8)
[2026-02-09 02:24:37] Arguments: --nthreads 8
[2026-02-09 02:24:37] Threads: 8
[2026-02-09 02:24:37] Checking for CVMFS
[2026-02-09 02:24:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 02:24:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 02:24:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 02:24:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 02:24:41] 2.11.2.0 4021 79374 105668 156039 0 54 21597705 25165825 4830 130560 0 32226090 99.854 24522714 3337 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-09 02:24:41] CVMFS is ok
[2026-02-09 02:24:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 02:24:41] Checking for apptainer binary...
[2026-02-09 02:24:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 02:24:41] Running /usr/bin/apptainer --version
[2026-02-09 02:24:41] apptainer version 1.3.2-1.el7
[2026-02-09 02:24:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 02:24:50] cg-vwn448.simple-grid.lan
[2026-02-09 02:24:50] apptainer works
[2026-02-09 02:24:50] Set ATHENA_PROC_NUMBER=8
[2026-02-09 02:24:50] Set ATHENA_CORE_NUMBER=8
[2026-02-09 02:24:50] Starting ATLAS job with PandaID=7004652371
[2026-02-09 02:24:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 06:45:43]  *** The last 200 lines of the pilot log: ***
[2026-02-09 06:45:43] 2026-02-09 05:44:33,953 | INFO     | total number of processed events: 400 (read)
[2026-02-09 06:45:43] 2026-02-09 05:44:33,955 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-7004652371/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 06:45:43] 2026-02-09 05:44:33,956 | INFO     | extracted standard info from prmon json
[2026-02-09 06:45:43] 2026-02-09 05:44:33,956 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 06:45:43] 2026-02-09 05:44:33,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 06:45:43] 2026-02-09 05:44:33,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 06:45:43] 2026-02-09 05:44:33,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 06:45:43] 2026-02-09 05:44:33,962 | INFO     | fitting pss+swap vs Time
[2026-02-09 06:45:43] 2026-02-09 05:44:33,963 | INFO     | sum of square deviations: 4616114457.5
[2026-02-09 06:45:43] 2026-02-09 05:44:33,965 | INFO     | sum of deviations: 75705822934.50003
[2026-02-09 06:45:43] 2026-02-09 05:44:33,965 | INFO     | mean x: 1770608345.5
[2026-02-09 06:45:43] 2026-02-09 05:44:33,965 | INFO     | mean y: 2448406.9959349595
[2026-02-09 06:45:43] 2026-02-09 05:44:33,965 | INFO     | intersect: -29036121395.575096
[2026-02-09 06:45:43] 2026-02-09 05:44:33,966 | INFO     | chi2: 7.426120151738456
[2026-02-09 06:45:43] 2026-02-09 05:44:33,966 | INFO     | sum of square deviations: 4340323240.0
[2026-02-09 06:45:43] 2026-02-09 05:44:33,968 | INFO     | sum of deviations: 90326365428.99998
[2026-02-09 06:45:43] 2026-02-09 05:44:33,968 | INFO     | mean x: 1770608193.0
[2026-02-09 06:45:43] 2026-02-09 05:44:33,969 | INFO     | mean y: 2456343.44813278
[2026-02-09 06:45:43] 2026-02-09 05:44:33,969 | INFO     | intersect: -36845629347.16953
[2026-02-09 06:45:43] 2026-02-09 05:44:33,969 | INFO     | chi2: 6.721928516398453
[2026-02-09 06:45:43] 2026-02-09 05:44:33,969 | INFO     | current chi2=6.721928516398453 (change=9.482631858240959 %)
[2026-02-09 06:45:43] 2026-02-09 05:44:33,969 | INFO     | right removable region: 240
[2026-02-09 06:45:43] 2026-02-09 05:44:33,970 | INFO     | sum of square deviations: 4340323240.0
[2026-02-09 06:45:43] 2026-02-09 05:44:33,972 | INFO     | sum of deviations: -9462871073.999996
[2026-02-09 06:45:43] 2026-02-09 05:44:33,972 | INFO     | mean x: 1770608498.0
[2026-02-09 06:45:43] 2026-02-09 05:44:33,972 | INFO     | mean y: 2495464.473029046
[2026-02-09 06:45:43] 2026-02-09 05:44:33,973 | INFO     | intersect: 3862816231.5278764
[2026-02-09 06:45:43] 2026-02-09 05:44:33,973 | INFO     | chi2: 2.578741749701353
[2026-02-09 06:45:43] 2026-02-09 05:44:33,973 | INFO     | current chi2=2.578741749701353 (change=65.27471011766933 %)
[2026-02-09 06:45:43] 2026-02-09 05:44:33,974 | INFO     | sum of square deviations: 4075741535.0
[2026-02-09 06:45:43] 2026-02-09 05:44:33,976 | INFO     | sum of deviations: -54316988291.000015
[2026-02-09 06:45:43] 2026-02-09 05:44:33,976 | INFO     | mean x: 1770608650.5
[2026-02-09 06:45:43] 2026-02-09 05:44:33,976 | INFO     | mean y: 2521177.9576271186
[2026-02-09 06:45:43] 2026-02-09 05:44:33,976 | INFO     | intersect: 23599240575.217403
[2026-02-09 06:45:43] 2026-02-09 05:44:33,977 | INFO     | chi2: 1.0131977331658846
[2026-02-09 06:45:43] 2026-02-09 05:44:33,977 | INFO     | current chi2=1.0131977331658846 (change=60.7096083474344 %)
[2026-02-09 06:45:43] 2026-02-09 05:44:33,977 | INFO     | sum of square deviations: 3822136780.0
[2026-02-09 06:45:43] 2026-02-09 05:44:33,979 | INFO     | sum of deviations: -57331871689.00001
[2026-02-09 06:45:43] 2026-02-09 05:44:33,979 | INFO     | mean x: 1770608803.0
[2026-02-09 06:45:43] 2026-02-09 05:44:33,980 | INFO     | mean y: 2522956.896103896
[2026-02-09 06:45:43] 2026-02-09 05:44:33,980 | INFO     | intersect: 26561571611.61481
[2026-02-09 06:45:43] 2026-02-09 05:44:33,980 | INFO     | chi2: 0.9762323243676769
[2026-02-09 06:45:43] 2026-02-09 05:44:33,980 | INFO     | current chi2=0.9762323243676769 (change=3.648390396877796 %)
[2026-02-09 06:45:43] 2026-02-09 05:44:33,980 | INFO     | left removable region: 30
[2026-02-09 06:45:43] 2026-02-09 05:44:33,981 | INFO     | sum of square deviations: 2871616632.5
[2026-02-09 06:45:43] 2026-02-09 05:44:33,983 | INFO     | sum of deviations: -18923581985.5
[2026-02-09 06:45:43] 2026-02-09 05:44:33,983 | INFO     | mean x: 1770609077.5
[2026-02-09 06:45:43] 2026-02-09 05:44:33,983 | INFO     | mean y: 2517974.8619047618
[2026-02-09 06:45:43] 2026-02-09 05:44:33,983 | INFO     | intersect: 11670602656.893976
[2026-02-09 06:45:43] 2026-02-09 05:44:33,983 | INFO     | chi2: 0.13128835951877402
[2026-02-09 06:45:43] 2026-02-09 05:44:33,984 | INFO     | current memory leak: -6.59 B/s (using 210 data points, chi2=0.13)
[2026-02-09 06:45:43] 2026-02-09 05:44:33,984 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-09 06:45:43] 2026-02-09 05:44:33,984 | INFO     | ..............................
[2026-02-09 06:45:43] 2026-02-09 05:44:33,985 | INFO     | . Timing measurements:
[2026-02-09 06:45:43] 2026-02-09 05:44:33,985 | INFO     | . get job = 0 s
[2026-02-09 06:45:43] 2026-02-09 05:44:33,985 | INFO     | . initial setup = 98 s
[2026-02-09 06:45:43] 2026-02-09 05:44:33,985 | INFO     | . payload setup = 132 s
[2026-02-09 06:45:43] 2026-02-09 05:44:33,985 | INFO     | . stage-in = 0 s
[2026-02-09 06:45:43] 2026-02-09 05:44:33,985 | INFO     | . payload execution = 15110 s
[2026-02-09 06:45:43] 2026-02-09 05:44:33,985 | INFO     | . stage-out = 3 s
[2026-02-09 06:45:43] 2026-02-09 05:44:33,985 | INFO     | . log creation = 1 s
[2026-02-09 06:45:43] 2026-02-09 05:44:33,985 | INFO     | ..............................
[2026-02-09 06:45:43] 2026-02-09 05:44:34,165 | INFO     | 
[2026-02-09 06:45:43] 2026-02-09 05:44:34,166 | INFO     | job summary report
[2026-02-09 06:45:43] 2026-02-09 05:44:34,166 | INFO     | --------------------------------------------------
[2026-02-09 06:45:43] 2026-02-09 05:44:34,166 | INFO     | PanDA job id: 7004652371
[2026-02-09 06:45:43] 2026-02-09 05:44:34,166 | INFO     | task id: 48318034
[2026-02-09 06:45:43] 2026-02-09 05:44:34,166 | INFO     | errors: (none)
[2026-02-09 06:45:43] 2026-02-09 05:44:34,166 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 06:45:43] 2026-02-09 05:44:34,166 | INFO     | pilot state: finished 
[2026-02-09 06:45:43] 2026-02-09 05:44:34,166 | INFO     | transexitcode: 0
[2026-02-09 06:45:43] 2026-02-09 05:44:34,166 | INFO     | exeerrorcode: 0
[2026-02-09 06:45:43] 2026-02-09 05:44:34,167 | INFO     | exeerrordiag: 
[2026-02-09 06:45:43] 2026-02-09 05:44:34,167 | INFO     | exitcode: 0
[2026-02-09 06:45:43] 2026-02-09 05:44:34,167 | INFO     | exitmsg: OK
[2026-02-09 06:45:43] 2026-02-09 05:44:34,167 | INFO     | cpuconsumptiontime: 58190 s
[2026-02-09 06:45:43] 2026-02-09 05:44:34,167 | INFO     | nevents: 400
[2026-02-09 06:45:43] 2026-02-09 05:44:34,167 | INFO     | neventsw: 0
[2026-02-09 06:45:43] 2026-02-09 05:44:34,167 | INFO     | pid: 18838
[2026-02-09 06:45:43] 2026-02-09 05:44:34,167 | INFO     | pgrp: 18838
[2026-02-09 06:45:43] 2026-02-09 05:44:34,167 | INFO     | corecount: 8
[2026-02-09 06:45:43] 2026-02-09 05:44:34,168 | INFO     | event service: False
[2026-02-09 06:45:43] 2026-02-09 05:44:34,168 | INFO     | sizes: {0: 2282570, 1: 2283031, 12: 2283031, 15247: 2314037, 15251: 2323037, 15252: 2323093, 15254: 2323415}
[2026-02-09 06:45:43] 2026-02-09 05:44:34,168 | INFO     | --------------------------------------------------
[2026-02-09 06:45:43] 2026-02-09 05:44:34,168 | INFO     | 
[2026-02-09 06:45:43] 2026-02-09 05:44:34,168 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-02-09 06:45:43] 2026-02-09 05:44:34,290 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,290 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,290 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,290 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,292 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,292 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,292 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 06:45:43] 2026-02-09 05:44:34,292 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,292 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 06:45:43] 2026-02-09 05:44:34,292 | INFO     | job 7004652371 has completed (purged errors)
[2026-02-09 06:45:43] 2026-02-09 05:44:34,292 | INFO     | overall cleanup function is called
[2026-02-09 06:45:43] 2026-02-09 05:44:35,302 | INFO     | --- collectZombieJob: --- 10, [18838]
[2026-02-09 06:45:43] 2026-02-09 05:44:35,302 | INFO     | zombie collector waiting for pid 18838
[2026-02-09 06:45:43] 2026-02-09 05:44:35,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 06:45:43] 2026-02-09 05:44:35,302 | INFO     | collected zombie processes
[2026-02-09 06:45:43] 2026-02-09 05:44:35,302 | INFO     | will attempt to kill all subprocesses of pid=18838
[2026-02-09 06:45:43] 2026-02-09 05:44:35,403 | INFO     | process IDs to be killed: [18838] (in reverse order)
[2026-02-09 06:45:43] 2026-02-09 05:44:36,273 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 06:45:43] 2026-02-09 05:44:36,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 06:45:43] 2026-02-09 05:44:36,276 | INFO     | did not find any defunct processes belonging to 18838
[2026-02-09 06:45:43] 2026-02-09 05:44:36,279 | INFO     | did not find any defunct processes belonging to 18838
[2026-02-09 06:45:43] 2026-02-09 05:44:36,279 | INFO     | ready for new job
[2026-02-09 06:45:43] 2026-02-09 05:44:36,279 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 06:45:43] 2026-02-09 05:44:36,281 | INFO     | **************************************
[2026-02-09 06:45:43] 2026-02-09 05:44:36,282 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 06:45:43] 2026-02-09 05:44:36,282 | INFO     | **************************************
[2026-02-09 06:45:43] 2026-02-09 05:44:36,282 | INFO     | 
[2026-02-09 06:45:43] 2026-02-09 05:44:36,282 | INFO     | pilot is running in a VM
[2026-02-09 06:45:43] 2026-02-09 05:44:36,282 | INFO     | architecture information:
[2026-02-09 06:45:43] 2026-02-09 05:44:36,289 | INFO     | executing command: cat /etc/os-release
[2026-02-09 06:45:43] 2026-02-09 05:44:36,604 | INFO     | cat /etc/os-release:
[2026-02-09 06:45:43] NAME="CentOS Linux"
[2026-02-09 06:45:43] VERSION="7 (Core)"
[2026-02-09 06:45:43] ID="centos"
[2026-02-09 06:45:43] ID_LIKE="rhel fedora"
[2026-02-09 06:45:43] VERSION_ID="7"
[2026-02-09 06:45:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 06:45:43] ANSI_COLOR="0;31"
[2026-02-09 06:45:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 06:45:43] HOME_URL="https://www.centos.org/"
[2026-02-09 06:45:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 06:45:43] 
[2026-02-09 06:45:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 06:45:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 06:45:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 06:45:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 06:45:43] 
[2026-02-09 06:45:43] 2026-02-09 05:44:36,604 | INFO     | **************************************
[2026-02-09 06:45:43] 2026-02-09 05:44:37,108 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-02-09 06:45:43] 2026-02-09 05:44:37,223 | INFO     | sufficient remaining disk space (495655583744 B)
[2026-02-09 06:45:43] 2026-02-09 05:44:37,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 06:45:43] 2026-02-09 05:44:37,224 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 06:45:43] 2026-02-09 05:44:37,224 | INFO     | update_server=False
[2026-02-09 06:45:43] 2026-02-09 05:44:37,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 06:45:43] 2026-02-09 05:44:37,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 06:45:43] 2026-02-09 05:44:37,454 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-09 06:45:43] 2026-02-09 05:44:37,454 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-09 06:45:43] 2026-02-09 05:44:37,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 06:45:43] 2026-02-09 05:44:37,454 | INFO     | will abort loop
[2026-02-09 06:45:43] 2026-02-09 05:44:37,570 | INFO     | all payload control threads have been joined
[2026-02-09 06:45:43] 2026-02-09 05:44:37,971 | INFO     | all data control threads have been joined
[2026-02-09 06:45:43] 2026-02-09 05:44:38,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 06:45:43] 2026-02-09 05:44:38,229 | INFO     | [job] retrieve thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:38,274 | INFO     | [payload] failed_post thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:38,413 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:38,460 | INFO     | [job] job monitor thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:38,554 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:38,576 | INFO     | [payload] control thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:38,875 | INFO     | all job control threads have been joined
[2026-02-09 06:45:43] 2026-02-09 05:44:38,977 | INFO     | [data] control thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:39,096 | INFO     | [payload] validate_post thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:39,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 06:45:43] 2026-02-09 05:44:39,236 | INFO     | [data] copytool_out thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:39,271 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:39,360 | INFO     | [data] copytool_in thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:39,406 | INFO     | [job] validate thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:39,623 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:39,881 | INFO     | [job] control thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:40,125 | INFO     | [job] queue monitor thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:44:42,154 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 06:45:43] 2026-02-09 05:45:06,921 | INFO     | PID=14327 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-09 06:45:43] 2026-02-09 05:45:06,921 | INFO     | .. there are 9 such processes running
[2026-02-09 06:45:43] 2026-02-09 05:45:06,921 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 06:45:43] 2026-02-09 05:45:06,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 06:45:43] 2026-02-09 05:45:06,921 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 06:45:43] 2026-02-09 05:45:32,758 | INFO     | [monitor] cgroup control has ended
[2026-02-09 06:45:43] 2026-02-09 05:45:34,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120868009792)>', '<ExcThread(monitor, started 140120221021952)>']
[2026-02-09 06:45:43] 2026-02-09 05:45:35,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 06:45:43] 2026-02-09 05:45:35,088 | INFO     | [monitor] control thread has ended
[2026-02-09 06:45:43] 2026-02-09 05:45:39,631 | INFO     | all workflow threads have been joined
[2026-02-09 06:45:43] 2026-02-09 05:45:39,631 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 06:45:43] 2026-02-09 05:45:39,631 | INFO     | traces error code: 0
[2026-02-09 06:45:43] 2026-02-09 05:45:39,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 06:45:43] 2026-02-09 05:45:40,005 [wrapper] ==== pilot stdout END ====
[2026-02-09 06:45:43] 2026-02-09 05:45:40,045 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 06:45:43] 2026-02-09 05:45:40,164 [wrapper] pilotpid: 14327
[2026-02-09 06:45:43] 2026-02-09 05:45:40,268 [wrapper] Pilot exit status: 0
[2026-02-09 06:45:43] 2026-02-09 05:45:40,760 [wrapper] pandaids: 7004652371
[2026-02-09 06:45:43] 2026-02-09 05:45:41,396 [wrapper] cleanup supervisor_pilot 26995 14328
[2026-02-09 06:45:43] 2026-02-09 05:45:41,459 [wrapper] Test setup, not cleaning
[2026-02-09 06:45:43] 2026-02-09 05:45:41,548 [wrapper] apfmon messages muted
[2026-02-09 06:45:43] 2026-02-09 05:45:41,621 [wrapper] ==== wrapper stdout END ====
[2026-02-09 06:45:43] 2026-02-09 05:45:41,726 [wrapper] ==== wrapper stderr END ====
[2026-02-09 06:45:43]  *** Error codes and diagnostics ***
[2026-02-09 06:45:43]     "exeErrorCode": 0,
[2026-02-09 06:45:43]     "exeErrorDiag": "",
[2026-02-09 06:45:43]     "pilotErrorCode": 0,
[2026-02-09 06:45:43]     "pilotErrorDiag": "",
[2026-02-09 06:45:43]  *** Listing of results directory ***
[2026-02-09 06:45:43] total 672920
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc    584627 Feb  8 10:40 pilot3.tar.gz
[2026-02-09 06:45:43] -rwx------. 1 boinc boinc     36322 Feb  8 10:44 runpilot2-wrapper.sh
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc      5111 Feb  8 10:47 queuedata.json
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc       100 Feb  9 02:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 06:45:43] -rwxr-xr-x. 1 boinc boinc      7986 Feb  9 02:24 run_atlas
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc       105 Feb  9 02:24 job.xml
[2026-02-09 06:45:43] -rw-r--r--. 2 boinc boinc 494726479 Feb  9 02:24 EVNT.48318032._000132.pool.root.1
[2026-02-09 06:45:43] drwxrwx--x. 2 boinc boinc        68 Feb  9 02:24 shared
[2026-02-09 06:45:43] -rw-r--r--. 2 boinc boinc    597974 Feb  9 02:24 input.tar.gz
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc      6392 Feb  9 02:24 init_data.xml
[2026-02-09 06:45:43] -rw-r--r--. 2 boinc boinc     15845 Feb  9 02:24 start_atlas.sh
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc         0 Feb  9 02:24 boinc_lockfile
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc      2536 Feb  9 02:24 pandaJob.out
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc       415 Feb  9 02:30 workernode_map.json
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc   1009504 Feb  9 02:30 agis_schedconf.cvmfs.json
[2026-02-09 06:45:43] drwx------. 5 boinc boinc      4096 Feb  9 02:30 pilot3
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc 185150477 Feb  9 06:43 HITS.48318034._011977.pool.root.1
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc       531 Feb  9 06:43 boinc_task_state.xml
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc        95 Feb  9 06:44 pilot_heartbeat.json
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc      1012 Feb  9 06:44 memory_monitor_summary.json
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc   1513088 Feb  9 06:44 agis_ddmendpoints.agis.ALL.json
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc    507114 Feb  9 06:44 log.48318034._011977.job.log.tgz.1
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc      6318 Feb  9 06:44 heartbeat.json
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc      8192 Feb  9 06:45 boinc_mmap_file
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc        28 Feb  9 06:45 wrapper_checkpoint.txt
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc      5067 Feb  9 06:45 pilotlog.txt
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc   2129220 Feb  9 06:45 log.48318034._011977.job.log.1
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc       357 Feb  9 06:45 output.list
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc       620 Feb  9 06:45 runtime_log
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc   2652160 Feb  9 06:45 result.tar.gz
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc      8832 Feb  9 06:45 runtime_log.err
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc       655 Feb  9 06:45 4VrNDmyVG98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAVdKDm2QBgwn.diag
[2026-02-09 06:45:43] -rw-r--r--. 1 boinc boinc     20714 Feb  9 06:45 stderr.txt
[2026-02-09 06:45:43] HITS file was successfully produced:
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc 185150477 Feb  9 06:43 shared/HITS.pool.root.1
[2026-02-09 06:45:43]  *** Contents of shared directory: ***
[2026-02-09 06:45:43] total 667136
[2026-02-09 06:45:43] -rw-r--r--. 2 boinc boinc 494726479 Feb  9 02:24 ATLAS.root_0
[2026-02-09 06:45:43] -rw-r--r--. 2 boinc boinc    597974 Feb  9 02:24 input.tar.gz
[2026-02-09 06:45:43] -rw-r--r--. 2 boinc boinc     15845 Feb  9 02:24 start_atlas.sh
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc 185150477 Feb  9 06:43 HITS.pool.root.1
[2026-02-09 06:45:43] -rw-------. 1 boinc boinc   2652160 Feb  9 06:45 result.tar.gz
06:45:44 (10200): run_atlas exited; CPU time 58426.657411
06:45:44 (10200): called boinc_finish(0)

</stderr_txt>
]]>

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