Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:23:02 (706180): wrapper (7.7.26015): starting
00:23:02 (706180): wrapper: running run_atlas (--nthreads 3)
[2026-02-09 00:23:02] Arguments: --nthreads 3
[2026-02-09 00:23:02] Threads: 3
[2026-02-09 00:23:02] Checking for CVMFS
[2026-02-09 00:23:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 00:23:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 00:23:02] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 00:23:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 00:23:02] 2.9.2.0 138169 3878 83644 156037 1 50 24246649 36864000 0 130560 0 1567745 99.983 145304 13273 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 00:23:02] CVMFS is ok
[2026-02-09 00:23:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 00:23:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 00:23:02] Further information can be found at the LHC@home message board.
[2026-02-09 00:23:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 00:23:02] Checking for apptainer binary...
[2026-02-09 00:23:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 00:23:02] Running /usr/bin/apptainer --version
[2026-02-09 00:23:02] apptainer version 1.4.1-1.1
[2026-02-09 00:23:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 00:23:02] atlasA223b
[2026-02-09 00:23:02] apptainer works
[2026-02-09 00:23:02] Set ATHENA_PROC_NUMBER=3
[2026-02-09 00:23:02] Set ATHENA_CORE_NUMBER=3
[2026-02-09 00:23:02] Starting ATLAS job with PandaID=6995416193
[2026-02-09 00:23:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 01:49:32]  *** The last 200 lines of the pilot log: ***
[2026-02-09 01:49:32] 2026-02-09 00:48:59,839 | INFO     | aborting loop
[2026-02-09 01:49:32] 2026-02-09 00:48:59,968 | INFO     | all job control threads have been joined
[2026-02-09 01:49:32] 2026-02-09 00:49:00,657 | INFO     | all data control threads have been joined
[2026-02-09 01:49:32] 2026-02-09 00:49:00,844 | INFO     | [job] retrieve thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:00,844 | INFO     | [job] queue monitor thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:00,844 | INFO     | [job] job monitor thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:00,973 | INFO     | [job] control thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:01,225 | INFO     | [job] validate thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:01,336 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:01,337 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:01,342 | INFO     | all payload control threads have been joined
[2026-02-09 01:49:32] 2026-02-09 00:49:01,343 | INFO     | [payload] failed_post thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:01,518 | INFO     | [data] copytool_in thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:01,663 | INFO     | [data] control thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:01,823 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:01,844 | INFO     | [data] copytool_out thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:02,348 | INFO     | [payload] control thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:02,353 | INFO     | [payload] validate_post thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:02,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 01:49:32] 2026-02-09 00:49:06,722 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:10,344 | INFO     | job.realtimelogging is not enabled
[2026-02-09 01:49:32] 2026-02-09 00:49:11,349 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 01:49:32] 2026-02-09 00:49:27,098 | INFO     | [monitor] cgroup control has ended
[2026-02-09 01:49:32] 2026-02-09 00:49:27,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140162895951680)>', '<ExcThread(monitor, started 140161887233792)>']
[2026-02-09 01:49:32] 2026-02-09 00:49:30,796 | INFO     | PID=710231 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 01:49:32] 2026-02-09 00:49:30,797 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 01:49:32] 2026-02-09 00:49:30,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 01:49:32] 2026-02-09 00:49:30,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 01:49:32] 2026-02-09 00:49:30,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 01:49:32] 2026-02-09 00:49:30,797 | INFO     | [monitor] control thread has ended
[2026-02-09 01:49:32] 2026-02-09 00:49:32,397 | INFO     | all workflow threads have been joined
[2026-02-09 01:49:32] 2026-02-09 00:49:32,398 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 01:49:32] 2026-02-09 00:49:32,398 | INFO     | traces error code: 0
[2026-02-09 01:49:32] 2026-02-09 00:49:32,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 01:49:32] 2026-02-09 00:49:32,446 [wrapper] ==== pilot stdout END ====
[2026-02-09 01:49:32] 2026-02-09 00:49:32,448 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 01:49:32] 2026-02-09 00:49:32,451 [wrapper] pilotpid: 710231
[2026-02-09 01:49:32] 2026-02-09 00:49:32,453 [wrapper] Pilot exit status: 0
[2026-02-09 01:49:32] 2026-02-09 00:49:32,461 [wrapper] pandaids: 6995416193
[2026-02-09 01:49:32] 2026-02-09 00:49:32,481 [wrapper] cleanup supervisor_pilot  720128 710232
[2026-02-09 01:49:32] 2026-02-09 00:49:32,483 [wrapper] Test setup, not cleaning
[2026-02-09 01:49:32] 2026-02-09 00:49:32,486 [wrapper] apfmon messages muted
[2026-02-09 01:49:32] 2026-02-09 00:49:32,488 [wrapper] ==== wrapper stdout END ====
[2026-02-09 01:49:32] 2026-02-09 00:49:32,491 [wrapper] ==== wrapper stderr END ====
[2026-02-09 01:49:32]  *** Error codes and diagnostics ***
[2026-02-09 01:49:32]     "exeErrorCode": 0,
[2026-02-09 01:49:32]     "exeErrorDiag": "",
[2026-02-09 01:49:32]     "pilotErrorCode": 0,
[2026-02-09 01:49:32]     "pilotErrorDiag": "",
[2026-02-09 01:49:32]  *** Listing of results directory ***
[2026-02-09 01:49:32] total 671560
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc    584422 Feb  1 05:35 pilot3.tar.gz
[2026-02-09 01:49:32] -rwx------ 1 boinc boinc     36322 Feb  1 05:38 runpilot2-wrapper.sh
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc      5111 Feb  1 05:41 queuedata.json
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc       100 Feb  9 00:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 01:49:32] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 00:23 run_atlas
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc       105 Feb  9 00:23 job.xml
[2026-02-09 01:49:32] -rw-r--r-- 2 boinc boinc 496254820 Feb  9 00:23 EVNT.48317929._000191.pool.root.1
[2026-02-09 01:49:32] -rw-r--r-- 2 boinc boinc    597767 Feb  9 00:23 input.tar.gz
[2026-02-09 01:49:32] -rw-r--r-- 2 boinc boinc     15845 Feb  9 00:23 start_atlas.sh
[2026-02-09 01:49:32] drwxrwx--x 2 boinc boinc      4096 Feb  9 00:23 shared
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc         0 Feb  9 00:23 boinc_setup_complete
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc      6449 Feb  9 00:23 init_data.xml
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc         0 Feb  9 00:23 boinc_lockfile
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc      2511 Feb  9 00:23 pandaJob.out
[2026-02-09 01:49:32] -rw------- 1 boinc boinc   1009496 Feb  9 00:23 agis_schedconf.cvmfs.json
[2026-02-09 01:49:32] -rw------- 1 boinc boinc   1513088 Feb  9 00:23 agis_ddmendpoints.agis.ALL.json
[2026-02-09 01:49:32] -rw------- 1 boinc boinc       427 Feb  9 00:23 workernode_map.json
[2026-02-09 01:49:32] drwx------ 5 boinc boinc      4096 Feb  9 00:23 pilot3
[2026-02-09 01:49:32] -rw------- 1 boinc boinc 185484089 Feb  9 01:48 HITS.48317931._010632.pool.root.1
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc       530 Feb  9 01:48 boinc_task_state.xml
[2026-02-09 01:49:32] -rw------- 1 boinc boinc        95 Feb  9 01:48 pilot_heartbeat.json
[2026-02-09 01:49:32] -rw------- 1 boinc boinc      1031 Feb  9 01:48 memory_monitor_summary.json
[2026-02-09 01:49:32] -rw------- 1 boinc boinc    261945 Feb  9 01:48 log.48317931._010632.job.log.tgz.1
[2026-02-09 01:49:32] -rw------- 1 boinc boinc      6304 Feb  9 01:48 heartbeat.json
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc        27 Feb  9 01:49 wrapper_checkpoint.txt
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc      8192 Feb  9 01:49 boinc_mmap_file
[2026-02-09 01:49:32] -rw------- 1 boinc boinc      4819 Feb  9 01:49 pilotlog.txt
[2026-02-09 01:49:32] -rw------- 1 boinc boinc    749057 Feb  9 01:49 log.48317931._010632.job.log.1
[2026-02-09 01:49:32] -rw------- 1 boinc boinc       357 Feb  9 01:49 output.list
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc       620 Feb  9 01:49 runtime_log
[2026-02-09 01:49:32] -rw------- 1 boinc boinc   1024000 Feb  9 01:49 result.tar.gz
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc      8916 Feb  9 01:49 runtime_log.err
[2026-02-09 01:49:32] -rw------- 1 boinc boinc       661 Feb  9 01:49 XDxMDm0Oe68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrYPKDm9072Qm.diag
[2026-02-09 01:49:32] -rw-r--r-- 1 boinc boinc      6904 Feb  9 01:49 stderr.txt
[2026-02-09 01:49:32] HITS file was successfully produced:
[2026-02-09 01:49:32] -rw------- 1 boinc boinc 185484089 Feb  9 01:48 shared/HITS.pool.root.1
[2026-02-09 01:49:32]  *** Contents of shared directory: ***
[2026-02-09 01:49:32] total 667372
[2026-02-09 01:49:32] -rw-r--r-- 2 boinc boinc 496254820 Feb  9 00:23 ATLAS.root_0
[2026-02-09 01:49:32] -rw-r--r-- 2 boinc boinc    597767 Feb  9 00:23 input.tar.gz
[2026-02-09 01:49:32] -rw-r--r-- 2 boinc boinc     15845 Feb  9 00:23 start_atlas.sh
[2026-02-09 01:49:32] -rw------- 1 boinc boinc 185484089 Feb  9 01:48 HITS.pool.root.1
[2026-02-09 01:49:32] -rw------- 1 boinc boinc   1024000 Feb  9 01:49 result.tar.gz
01:49:34 (706180): run_atlas exited; CPU time 14742.812731
01:49:34 (706180): called boinc_finish(0)

</stderr_txt>
]]>

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