Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:07:39 (727): wrapper (7.7.26015): starting
05:07:39 (727): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 05:07:39] Arguments: --nthreads 8
[2026-02-08 05:07:39] Threads: 8
[2026-02-08 05:07:39] Checking for CVMFS
[2026-02-08 05:07:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 05:07:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 05:07:39] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 05:07:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 05:07:39] 2.11.2.0 10718 224130 148212 156014 0 52 12601584 18432001 1833 130560 0 146883908 99.981 8349717 30075 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-08 05:07:39] CVMFS is ok
[2026-02-08 05:07:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 05:07:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 05:07:39] Further information can be found at the LHC@home message board.
[2026-02-08 05:07:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 05:07:39] Checking for apptainer binary...
[2026-02-08 05:07:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 05:07:39] Running /usr/bin/apptainer --version
[2026-02-08 05:07:39] apptainer version 1.3.2-1.el7
[2026-02-08 05:07:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 05:07:40] c-206-2.aglt2.org
[2026-02-08 05:07:40] apptainer works
[2026-02-08 05:07:40] Set ATHENA_PROC_NUMBER=8
[2026-02-08 05:07:40] Set ATHENA_CORE_NUMBER=8
[2026-02-08 05:07:40] Starting ATLAS job with PandaID=7007433442
[2026-02-08 05:07:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 09:48:28]  *** The last 200 lines of the pilot log: ***
[2026-02-08 09:48:28] 2026-02-08 14:47:45,076 | INFO     | right removable region: 269
[2026-02-08 09:48:28] 2026-02-08 14:47:45,076 | INFO     | sum of square deviations: 6103286527.5
[2026-02-08 09:48:28] 2026-02-08 14:47:45,079 | INFO     | sum of deviations: 21758742547.5
[2026-02-08 09:48:28] 2026-02-08 14:47:45,079 | INFO     | mean x: 1770553794.5
[2026-02-08 09:48:28] 2026-02-08 14:47:45,079 | INFO     | mean y: 2554396.248148148
[2026-02-08 09:48:28] 2026-02-08 14:47:45,079 | INFO     | intersect: -6309622495.241356
[2026-02-08 09:48:28] 2026-02-08 14:47:45,080 | INFO     | chi2: 0.027639467773411693
[2026-02-08 09:48:28] 2026-02-08 14:47:45,080 | INFO     | current chi2=0.027639467773411693 (change=97.94879207078304 %)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,081 | INFO     | sum of square deviations: 5770452380.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,083 | INFO     | sum of deviations: 16166375733.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,084 | INFO     | mean x: 1770553947.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,084 | INFO     | mean y: 2556958.2981132073
[2026-02-08 09:48:28] 2026-02-08 14:47:45,084 | INFO     | intersect: -4957789038.482848
[2026-02-08 09:48:28] 2026-02-08 14:47:45,084 | INFO     | chi2: 0.017885856324629006
[2026-02-08 09:48:28] 2026-02-08 14:47:45,085 | INFO     | current chi2=0.017885856324629006 (change=35.28870935121753 %)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,085 | INFO     | sum of square deviations: 5449944045.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,088 | INFO     | sum of deviations: 16868142638.5
[2026-02-08 09:48:28] 2026-02-08 14:47:45,088 | INFO     | mean x: 1770554099.5
[2026-02-08 09:48:28] 2026-02-08 14:47:45,088 | INFO     | mean y: 2556646.6038461537
[2026-02-08 09:48:28] 2026-02-08 14:47:45,088 | INFO     | intersect: -5477492112.235643
[2026-02-08 09:48:28] 2026-02-08 14:47:45,089 | INFO     | chi2: 0.0032335180633791265
[2026-02-08 09:48:28] 2026-02-08 14:47:45,089 | INFO     | current chi2=0.0032335180633791265 (change=81.92136845622237 %)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,090 | INFO     | sum of square deviations: 5141528960.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,092 | INFO     | sum of deviations: 14410454865.000002
[2026-02-08 09:48:28] 2026-02-08 14:47:45,092 | INFO     | mean x: 1770554252.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,092 | INFO     | mean y: 2557860.8352941177
[2026-02-08 09:48:28] 2026-02-08 14:47:45,093 | INFO     | intersect: -4959874974.412189
[2026-02-08 09:48:28] 2026-02-08 14:47:45,093 | INFO     | chi2: 0.002005416043376853
[2026-02-08 09:48:28] 2026-02-08 14:47:45,093 | INFO     | current chi2=0.002005416043376853 (change=37.98036676866028 %)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,094 | INFO     | sum of square deviations: 4844974562.5
[2026-02-08 09:48:28] 2026-02-08 14:47:45,096 | INFO     | sum of deviations: 12631926421.000004
[2026-02-08 09:48:28] 2026-02-08 14:47:45,096 | INFO     | mean x: 1770554404.5
[2026-02-08 09:48:28] 2026-02-08 14:47:45,097 | INFO     | mean y: 2558774.32
[2026-02-08 09:48:28] 2026-02-08 14:47:45,097 | INFO     | intersect: -4613670407.795852
[2026-02-08 09:48:28] 2026-02-08 14:47:45,097 | INFO     | chi2: 0.0014854710439665341
[2026-02-08 09:48:28] 2026-02-08 14:47:45,098 | INFO     | current chi2=0.0014854710439665341 (change=25.927038986623497 %)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,098 | INFO     | sum of square deviations: 4560048290.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,100 | INFO     | sum of deviations: 11169307034.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,101 | INFO     | mean x: 1770554557.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,101 | INFO     | mean y: 2559557.118367347
[2026-02-08 09:48:28] 2026-02-08 14:47:45,101 | INFO     | intersect: -4334207558.034453
[2026-02-08 09:48:28] 2026-02-08 14:47:45,101 | INFO     | chi2: 0.0011873697274325465
[2026-02-08 09:48:28] 2026-02-08 14:47:45,102 | INFO     | current chi2=0.0011873697274325465 (change=20.067797197715254 %)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,102 | INFO     | left removable region: 60
[2026-02-08 09:48:28] 2026-02-08 14:47:45,102 | INFO     | sum of square deviations: 2830787960.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,104 | INFO     | sum of deviations: 5244741082.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,104 | INFO     | mean x: 1770555289.0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,104 | INFO     | mean y: 2562858.5837320574
[2026-02-08 09:48:28] 2026-02-08 14:47:45,105 | INFO     | intersect: -3277832633.196826
[2026-02-08 09:48:28] 2026-02-08 14:47:45,105 | INFO     | chi2: 0.0003682682713000175
[2026-02-08 09:48:28] 2026-02-08 14:47:45,105 | INFO     | current memory leak: 1.85 B/s (using 209 data points, chi2=0.00)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,106 | INFO     | could have reported an average CPU frequency of 2455 MHz (13 samples)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,106 | INFO     | ..............................
[2026-02-08 09:48:28] 2026-02-08 14:47:45,106 | INFO     | . Timing measurements:
[2026-02-08 09:48:28] 2026-02-08 14:47:45,107 | INFO     | . get job = 0 s
[2026-02-08 09:48:28] 2026-02-08 14:47:45,107 | INFO     | . initial setup = 5 s
[2026-02-08 09:48:28] 2026-02-08 14:47:45,107 | INFO     | . payload setup = 4 s
[2026-02-08 09:48:28] 2026-02-08 14:47:45,107 | INFO     | . stage-in = 0 s
[2026-02-08 09:48:28] 2026-02-08 14:47:45,107 | INFO     | . payload execution = 16776 s
[2026-02-08 09:48:28] 2026-02-08 14:47:45,107 | INFO     | . stage-out = 2 s
[2026-02-08 09:48:28] 2026-02-08 14:47:45,108 | INFO     | . log creation = 0 s
[2026-02-08 09:48:28] 2026-02-08 14:47:45,108 | INFO     | ..............................
[2026-02-08 09:48:28] 2026-02-08 14:47:45,245 | INFO     | 
[2026-02-08 09:48:28] 2026-02-08 14:47:45,245 | INFO     | job summary report
[2026-02-08 09:48:28] 2026-02-08 14:47:45,245 | INFO     | --------------------------------------------------
[2026-02-08 09:48:28] 2026-02-08 14:47:45,245 | INFO     | PanDA job id: 7007433442
[2026-02-08 09:48:28] 2026-02-08 14:47:45,245 | INFO     | task id: 48431096
[2026-02-08 09:48:28] 2026-02-08 14:47:45,245 | INFO     | errors: (none)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,246 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 09:48:28] 2026-02-08 14:47:45,246 | INFO     | pilot state: finished 
[2026-02-08 09:48:28] 2026-02-08 14:47:45,246 | INFO     | transexitcode: 0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,246 | INFO     | exeerrorcode: 0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,246 | INFO     | exeerrordiag: 
[2026-02-08 09:48:28] 2026-02-08 14:47:45,246 | INFO     | exitcode: 0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,246 | INFO     | exitmsg: OK
[2026-02-08 09:48:28] 2026-02-08 14:47:45,246 | INFO     | cpuconsumptiontime: 127171 s
[2026-02-08 09:48:28] 2026-02-08 14:47:45,246 | INFO     | nevents: 400
[2026-02-08 09:48:28] 2026-02-08 14:47:45,246 | INFO     | neventsw: 0
[2026-02-08 09:48:28] 2026-02-08 14:47:45,247 | INFO     | pid: 8922
[2026-02-08 09:48:28] 2026-02-08 14:47:45,247 | INFO     | pgrp: 8922
[2026-02-08 09:48:28] 2026-02-08 14:47:45,247 | INFO     | corecount: 8
[2026-02-08 09:48:28] 2026-02-08 14:47:45,247 | INFO     | event service: False
[2026-02-08 09:48:28] 2026-02-08 14:47:45,247 | INFO     | sizes: {0: 2282653, 1: 2283114, 16785: 2315059, 16788: 2324057, 16789: 2324307}
[2026-02-08 09:48:28] 2026-02-08 14:47:45,247 | INFO     | --------------------------------------------------
[2026-02-08 09:48:28] 2026-02-08 14:47:45,247 | INFO     | 
[2026-02-08 09:48:28] 2026-02-08 14:47:45,247 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-08 09:48:28] 2026-02-08 14:47:45,260 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,261 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,261 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,261 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,262 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,262 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 09:48:28] 2026-02-08 14:47:45,263 | INFO     | job 7007433442 has completed (purged errors)
[2026-02-08 09:48:28] 2026-02-08 14:47:45,263 | INFO     | overall cleanup function is called
[2026-02-08 09:48:28] 2026-02-08 14:47:46,271 | INFO     | --- collectZombieJob: --- 10, [8922]
[2026-02-08 09:48:28] 2026-02-08 14:47:46,271 | INFO     | zombie collector waiting for pid 8922
[2026-02-08 09:48:28] 2026-02-08 14:47:46,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 09:48:28] 2026-02-08 14:47:46,271 | INFO     | collected zombie processes
[2026-02-08 09:48:28] 2026-02-08 14:47:46,271 | INFO     | will attempt to kill all subprocesses of pid=8922
[2026-02-08 09:48:28] 2026-02-08 14:47:46,391 | INFO     | process IDs to be killed: [8922] (in reverse order)
[2026-02-08 09:48:28] 2026-02-08 14:47:46,434 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 09:48:28] 2026-02-08 14:47:46,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 09:48:28] 2026-02-08 14:47:46,440 | INFO     | did not find any defunct processes belonging to 8922
[2026-02-08 09:48:28] 2026-02-08 14:47:46,444 | INFO     | did not find any defunct processes belonging to 8922
[2026-02-08 09:48:28] 2026-02-08 14:47:46,445 | INFO     | ready for new job
[2026-02-08 09:48:28] 2026-02-08 14:47:46,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 09:48:28] 2026-02-08 14:47:46,447 | INFO     | **************************************
[2026-02-08 09:48:28] 2026-02-08 14:47:46,447 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 09:48:28] 2026-02-08 14:47:46,447 | INFO     | **************************************
[2026-02-08 09:48:28] 2026-02-08 14:47:46,447 | INFO     | 
[2026-02-08 09:48:28] 2026-02-08 14:47:46,449 | INFO     | architecture information:
[2026-02-08 09:48:28] 2026-02-08 14:47:46,449 | INFO     | executing command: cat /etc/os-release
[2026-02-08 09:48:28] 2026-02-08 14:47:46,461 | INFO     | cat /etc/os-release:
[2026-02-08 09:48:28] NAME="CentOS Linux"
[2026-02-08 09:48:28] VERSION="7 (Core)"
[2026-02-08 09:48:28] ID="centos"
[2026-02-08 09:48:28] ID_LIKE="rhel fedora"
[2026-02-08 09:48:28] VERSION_ID="7"
[2026-02-08 09:48:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 09:48:28] ANSI_COLOR="0;31"
[2026-02-08 09:48:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 09:48:28] HOME_URL="https://www.centos.org/"
[2026-02-08 09:48:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 09:48:28] 
[2026-02-08 09:48:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 09:48:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 09:48:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 09:48:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 09:48:28] 
[2026-02-08 09:48:28] 2026-02-08 14:47:46,462 | INFO     | **************************************
[2026-02-08 09:48:28] 2026-02-08 14:47:46,964 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-08 09:48:28] 2026-02-08 14:47:46,977 | INFO     | sufficient remaining disk space (25389170688 B)
[2026-02-08 09:48:28] 2026-02-08 14:47:46,977 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 09:48:28] 2026-02-08 14:47:46,978 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 09:48:28] 2026-02-08 14:47:46,978 | INFO     | update_server=False
[2026-02-08 09:48:28] 2026-02-08 14:47:46,978 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 09:48:28] 2026-02-08 14:47:46,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 09:48:28] 2026-02-08 14:47:46,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 09:48:28] 2026-02-08 14:47:46,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 09:48:28] 2026-02-08 14:47:47,438 | INFO     | all data control threads have been joined
[2026-02-08 09:48:28] 2026-02-08 14:47:47,463 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 09:48:28] 2026-02-08 14:47:47,464 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 09:48:28] 2026-02-08 14:47:47,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 09:48:28] 2026-02-08 14:47:47,464 | INFO     | will abort loop
[2026-02-08 09:48:28] 2026-02-08 14:47:47,979 | INFO     | [job] retrieve thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:47,980 | INFO     | [job] queue monitor thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:48,327 | INFO     | all payload control threads have been joined
[2026-02-08 09:48:28] 2026-02-08 14:47:48,353 | INFO     | [payload] validate_post thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:48,443 | INFO     | [data] control thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:48,457 | INFO     | all job control threads have been joined
[2026-02-08 09:48:28] 2026-02-08 14:47:48,470 | INFO     | [job] job monitor thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:48,639 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:48,984 | INFO     | [data] copytool_out thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:49,001 | INFO     | [job] validate thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:49,218 | INFO     | [payload] failed_post thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:49,306 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:49,332 | INFO     | [payload] control thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:49,438 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:49,448 | INFO     | [data] copytool_in thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:49,462 | INFO     | [job] control thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:50,987 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:47:57,483 | INFO     | job.realtimelogging is not enabled
[2026-02-08 09:48:28] 2026-02-08 14:47:58,489 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 09:48:28] 2026-02-08 14:48:16,678 | INFO     | PID=4559 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-08 09:48:28] 2026-02-08 14:48:16,678 | INFO     | .. there are 3 such processes running
[2026-02-08 09:48:28] 2026-02-08 14:48:16,678 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 09:48:28] 2026-02-08 14:48:16,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 09:48:28] 2026-02-08 14:48:16,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 09:48:28] 2026-02-08 14:48:21,443 | INFO     | [monitor] cgroup control has ended
[2026-02-08 09:48:28] 2026-02-08 14:48:23,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216106731328)>', '<ExcThread(monitor, started 140215800796928)>']
[2026-02-08 09:48:28] 2026-02-08 14:48:23,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 09:48:28] 2026-02-08 14:48:23,710 | INFO     | [monitor] control thread has ended
[2026-02-08 09:48:28] 2026-02-08 14:48:28,526 | INFO     | all workflow threads have been joined
[2026-02-08 09:48:28] 2026-02-08 14:48:28,526 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 09:48:28] 2026-02-08 14:48:28,526 | INFO     | traces error code: 0
[2026-02-08 09:48:28] 2026-02-08 14:48:28,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 09:48:28] 2026-02-08 14:48:28,655 [wrapper] ==== pilot stdout END ====
[2026-02-08 09:48:28] 2026-02-08 14:48:28,658 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 09:48:28] 2026-02-08 14:48:28,660 [wrapper] pilotpid: 4559
[2026-02-08 09:48:28] 2026-02-08 14:48:28,662 [wrapper] Pilot exit status: 0
[2026-02-08 09:48:28] 2026-02-08 14:48:28,671 [wrapper] pandaids: 7007433442
[2026-02-08 09:48:28] 2026-02-08 14:48:28,698 [wrapper] cleanup supervisor_pilot  3556 4560
[2026-02-08 09:48:28] 2026-02-08 14:48:28,701 [wrapper] Test setup, not cleaning
[2026-02-08 09:48:28] 2026-02-08 14:48:28,704 [wrapper] apfmon messages muted
[2026-02-08 09:48:28] 2026-02-08 14:48:28,706 [wrapper] ==== wrapper stdout END ====
[2026-02-08 09:48:28] 2026-02-08 14:48:28,709 [wrapper] ==== wrapper stderr END ====
[2026-02-08 09:48:28]  *** Error codes and diagnostics ***
[2026-02-08 09:48:28]     "exeErrorCode": 0,
[2026-02-08 09:48:28]     "exeErrorDiag": "",
[2026-02-08 09:48:28]     "pilotErrorCode": 0,
[2026-02-08 09:48:28]     "pilotErrorDiag": "",
[2026-02-08 09:48:28]  *** Listing of results directory ***
[2026-02-08 09:48:28] total 958372
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas    584627 Feb  8 00:10 pilot3.tar.gz
[2026-02-08 09:48:28] -rwx------ 1 boincer umatlas     36322 Feb  8 00:11 runpilot2-wrapper.sh
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas      5111 Feb  8 00:12 queuedata.json
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas       100 Feb  8 05:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 09:48:28] -rwxr-xr-x 1 boincer umatlas      7986 Feb  8 05:07 run_atlas
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas       105 Feb  8 05:07 job.xml
[2026-02-08 09:48:28] -rw-r--r-- 2 boincer umatlas 683478820 Feb  8 05:07 EVNT.48431094._000433.pool.root.1
[2026-02-08 09:48:28] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 05:07 start_atlas.sh
[2026-02-08 09:48:28] drwxrwx--x 2 boincer umatlas      4096 Feb  8 05:07 shared
[2026-02-08 09:48:28] -rw-r--r-- 2 boincer umatlas    597956 Feb  8 05:07 input.tar.gz
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas         0 Feb  8 05:07 boinc_lockfile
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas      2556 Feb  8 05:07 pandaJob.out
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas        57 Feb  8 05:07 setup.sh.local
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas   1009518 Feb  8 05:07 agis_schedconf.cvmfs.json
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas       433 Feb  8 05:07 workernode_map.json
[2026-02-08 09:48:28] drwx------ 5 boincer umatlas      4096 Feb  8 05:07 pilot3
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas      5952 Feb  8 09:38 init_data.xml
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas 288142982 Feb  8 09:46 HITS.48431096._010616.pool.root.1
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas       532 Feb  8 09:47 boinc_task_state.xml
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas      1054 Feb  8 09:47 memory_monitor_summary.json
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas        95 Feb  8 09:47 pilot_heartbeat.json
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas   1513088 Feb  8 09:47 agis_ddmendpoints.agis.ALL.json
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas    544034 Feb  8 09:47 log.48431096._010616.job.log.tgz.1
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas      6417 Feb  8 09:47 heartbeat.json
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas      8192 Feb  8 09:48 boinc_mmap_file
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas        29 Feb  8 09:48 wrapper_checkpoint.txt
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas      5074 Feb  8 09:48 pilotlog.txt
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas   2359596 Feb  8 09:48 log.48431096._010616.job.log.1
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas       357 Feb  8 09:48 output.list
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas       620 Feb  8 09:48 runtime_log
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas   2918400 Feb  8 09:48 result.tar.gz
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas       662 Feb  8 09:48 Vi2KDm6FC98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmdwcKDmsY4WZm.diag
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas      9337 Feb  8 09:48 runtime_log.err
[2026-02-08 09:48:28] -rw-r--r-- 1 boincer umatlas     20899 Feb  8 09:48 stderr.txt
[2026-02-08 09:48:28] HITS file was successfully produced:
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas 288142982 Feb  8 09:46 shared/HITS.pool.root.1
[2026-02-08 09:48:28]  *** Contents of shared directory: ***
[2026-02-08 09:48:28] total 952312
[2026-02-08 09:48:28] -rw-r--r-- 2 boincer umatlas 683478820 Feb  8 05:07 ATLAS.root_0
[2026-02-08 09:48:28] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 05:07 start_atlas.sh
[2026-02-08 09:48:28] -rw-r--r-- 2 boincer umatlas    597956 Feb  8 05:07 input.tar.gz
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas 288142982 Feb  8 09:46 HITS.pool.root.1
[2026-02-08 09:48:28] -rw------- 1 boincer umatlas   2918400 Feb  8 09:48 result.tar.gz
09:48:30 (727): run_atlas exited; CPU time 127407.013414
09:48:30 (727): called boinc_finish(0)

</stderr_txt>
]]>

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