Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:44:53 (3335196): wrapper (7.7.26015): starting
05:44:53 (3335196): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 05:44:53] Arguments: --nthreads 12
[2026-02-08 05:44:53] Threads: 12
[2026-02-08 05:44:53] Checking for CVMFS
[2026-02-08 05:44:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 05:44:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 05:44:53] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 05:44:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 05:44:54] 2.11.5.0 4128724 35339 170040 156021 0 506 44262041 45568001 29241 130560 0 382609368 99.840 178040748 19440 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-08 05:44:54] CVMFS is ok
[2026-02-08 05:44:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 05:44:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 05:44:54] Further information can be found at the LHC@home message board.
[2026-02-08 05:44:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 05:44:54] Checking for apptainer binary...
[2026-02-08 05:44:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 05:44:54] Running /usr/bin/apptainer --version
[2026-02-08 05:44:54] apptainer version 1.4.1-1.el9
[2026-02-08 05:44:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 05:44:54] wns0032.triumf.lcg
[2026-02-08 05:44:54] apptainer works
[2026-02-08 05:44:54] Set ATHENA_PROC_NUMBER=12
[2026-02-08 05:44:54] Set ATHENA_CORE_NUMBER=12
[2026-02-08 05:44:54] Starting ATLAS job with PandaID=7004480566
[2026-02-08 05:44:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 05:49:34]  *** The last 200 lines of the pilot log: ***
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | WARNING  | wrong length of table data, x=[1770558364.0], y=[2134.0] (must be same and length>=4)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | could have reported an average CPU frequency of 2697 MHz (4 samples)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | ..............................
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . Timing measurements:
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . get job = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . initial setup = 14 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . payload setup = 17 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . stage-in = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . payload execution = 47 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . stage-out = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . log creation = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,680 | INFO     | ..............................
[2026-02-08 05:49:34] 2026-02-08 13:48:39,680 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 05:49:34] 2026-02-08 13:48:39,680 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004480566/pilotlog.txt
[2026-02-08 05:49:34] 2026-02-08 13:48:39,717 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-08 05:49:34] - Log from pilotlog.txt -
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7004480566/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | INFO     | extracted standard info from prmon json
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | WARNING  | wrong length of table data, x=[1770558364.0], y=[2134.0] (must be same and length>=4)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | could have reported an average CPU frequency of 2697 MHz (4 samples)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | ..............................
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . Timing measurements:
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . get job = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . initial setup = 14 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . payload setup = 17 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . stage-in = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . payload execution = 47 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . stage-out = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . log creation = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,680 | INFO     | ..............................
[2026-02-08 05:49:34] 2026-02-08 13:48:39,680 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 05:49:34] 2026-02-08 13:48:39,680 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004480566/pilotlog.txt
[2026-02-08 05:49:34] 2026-02-08 13:48:39,718 | WARNING  | 
[2026-02-08 05:49:34] [begin log extracts]
[2026-02-08 05:49:34] - Log from pilotlog.txt -
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7004480566/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | INFO     | extracted standard info from prmon json
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 05:49:34] 2026-02-08 13:48:39,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | WARNING  | wrong length of table data, x=[1770558364.0], y=[2134.0] (must be same and length>=4)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | could have reported an average CPU frequency of 2697 MHz (4 samples)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | ..............................
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . Timing measurements:
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . get job = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . initial setup = 14 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . payload setup = 17 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . stage-in = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . payload execution = 47 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . stage-out = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,679 | INFO     | . log creation = 0 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,680 | INFO     | ..............................
[2026-02-08 05:49:34] 2026-02-08 13:48:39,680 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 05:49:34] 2026-02-08 13:48:39,680 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004480566/pilotlog.txt
[2026-02-08 05:49:34] [end log extracts]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,718 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,718 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | 
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | job summary report
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | --------------------------------------------------
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | PanDA job id: 7004480566
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | task id: 48442031
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-08 05:46:30,332 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | pilot state: failed 
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | transexitcode: 65
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | exeerrorcode: 65
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | exitcode: 65
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | cpuconsumptiontime: 14 s
[2026-02-08 05:49:34] 2026-02-08 13:48:39,774 | INFO     | nevents: 0
[2026-02-08 05:49:34] 2026-02-08 13:48:39,775 | INFO     | neventsw: 0
[2026-02-08 05:49:34] 2026-02-08 13:48:39,775 | INFO     | pid: 3356313
[2026-02-08 05:49:34] 2026-02-08 13:48:39,775 | INFO     | pgrp: 3356313
[2026-02-08 05:49:34] 2026-02-08 13:48:39,775 | INFO     | corecount: 12
[2026-02-08 05:49:34] 2026-02-08 13:48:39,775 | INFO     | event service: False
[2026-02-08 05:49:34] 2026-02-08 13:48:39,775 | INFO     | sizes: {0: 2282609, 1: 2283070, 69: 2306293, 71: 2310585, 73: 2310673, 190: 2310839}
[2026-02-08 05:49:34] 2026-02-08 13:48:39,775 | INFO     | --------------------------------------------------
[2026-02-08 05:49:34] 2026-02-08 13:48:39,775 | INFO     | 
[2026-02-08 05:49:34] 2026-02-08 13:48:39,775 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-08 05:49:34] 2026-02-08 13:48:39,798 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,799 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,800 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 05:49:34] 2026-02-08 13:48:39,800 | INFO     | job 7004480566 has completed (purged errors)
[2026-02-08 05:49:34] 2026-02-08 13:48:39,800 | INFO     | overall cleanup function is called
[2026-02-08 05:49:34] 2026-02-08 13:48:40,807 | INFO     | --- collectZombieJob: --- 10, [3356313]
[2026-02-08 05:49:34] 2026-02-08 13:48:40,807 | INFO     | zombie collector waiting for pid 3356313
[2026-02-08 05:49:34] 2026-02-08 13:48:40,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 05:49:34] 2026-02-08 13:48:40,807 | INFO     | collected zombie processes
[2026-02-08 05:49:34] 2026-02-08 13:48:40,807 | INFO     | will attempt to kill all subprocesses of pid=3356313
[2026-02-08 05:49:34] 2026-02-08 13:48:41,016 | INFO     | process IDs to be killed: [3356313] (in reverse order)
[2026-02-08 05:49:34] 2026-02-08 13:48:41,412 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 05:49:34] 2026-02-08 13:48:41,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 05:49:34] 2026-02-08 13:48:41,422 | INFO     | did not find any defunct processes belonging to 3356313
[2026-02-08 05:49:34] 2026-02-08 13:48:41,430 | INFO     | did not find any defunct processes belonging to 3356313
[2026-02-08 05:49:34] 2026-02-08 13:48:41,430 | INFO     | ready for new job
[2026-02-08 05:49:34] 2026-02-08 13:48:41,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 05:49:34] 2026-02-08 13:48:41,432 | INFO     | **************************************
[2026-02-08 05:49:34] 2026-02-08 13:48:41,432 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 05:49:34] 2026-02-08 13:48:41,432 | INFO     | **************************************
[2026-02-08 05:49:34] 2026-02-08 13:48:41,432 | INFO     | 
[2026-02-08 05:49:34] 2026-02-08 13:48:41,434 | INFO     | architecture information:
[2026-02-08 05:49:34] 2026-02-08 13:48:41,434 | INFO     | executing command: cat /etc/os-release
[2026-02-08 05:49:34] 2026-02-08 13:48:41,446 | INFO     | cat /etc/os-release:
[2026-02-08 05:49:34] NAME="CentOS Linux"
[2026-02-08 05:49:34] VERSION="7 (Core)"
[2026-02-08 05:49:34] ID="centos"
[2026-02-08 05:49:34] ID_LIKE="rhel fedora"
[2026-02-08 05:49:34] VERSION_ID="7"
[2026-02-08 05:49:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 05:49:34] ANSI_COLOR="0;31"
[2026-02-08 05:49:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 05:49:34] HOME_URL="https://www.centos.org/"
[2026-02-08 05:49:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 05:49:34] 
[2026-02-08 05:49:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 05:49:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 05:49:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 05:49:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 05:49:34] 
[2026-02-08 05:49:34] 2026-02-08 13:48:41,447 | INFO     | **************************************
[2026-02-08 05:49:34] 2026-02-08 13:48:41,950 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-08 05:49:34] 2026-02-08 13:48:41,975 | INFO     | sufficient remaining disk space (2011400503296 B)
[2026-02-08 05:49:34] 2026-02-08 13:48:41,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 05:49:34] 2026-02-08 13:48:41,976 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 05:49:34] 2026-02-08 13:48:41,976 | INFO     | update_server=False
[2026-02-08 05:49:34] 2026-02-08 13:48:41,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 05:49:34] 2026-02-08 13:48:41,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 05:49:34] 2026-02-08 13:48:41,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 05:49:34] 2026-02-08 13:48:41,984 | INFO     | all payload control threads have been joined
[2026-02-08 05:49:34] 2026-02-08 13:48:42,449 | INFO     | all data control threads have been joined
[2026-02-08 05:49:34] 2026-02-08 13:48:42,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 05:49:34] 2026-02-08 13:48:42,907 | INFO     | aborting loop
[2026-02-08 05:49:34] 2026-02-08 13:48:42,999 | INFO     | [job] retrieve thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:42,999 | INFO     | [payload] control thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:43,018 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:43,099 | INFO     | [payload] failed_post thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:43,184 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:43,253 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:43,455 | INFO     | [data] control thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:43,627 | INFO     | all job control threads have been joined
[2026-02-08 05:49:34] 2026-02-08 13:48:43,630 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:43,764 | INFO     | [payload] validate_post thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:43,828 | INFO     | [data] copytool_in thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:43,919 | INFO     | [job] job monitor thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:43,983 | INFO     | [data] copytool_out thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:44,291 | INFO     | [job] validate thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:44,638 | INFO     | [job] control thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:44,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 05:49:34] 2026-02-08 13:48:45,801 | INFO     | [job] queue monitor thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:48:45,984 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 05:49:34] 2026-02-08 13:49:12,454 | INFO     | PID=3342182 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 05:49:34] 2026-02-08 13:49:12,455 | INFO     | .. there are 42 such processes running
[2026-02-08 05:49:34] 2026-02-08 13:49:12,455 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 05:49:34] 2026-02-08 13:49:12,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 05:49:34] 2026-02-08 13:49:12,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 05:49:34] 2026-02-08 13:49:28,279 | INFO     | [monitor] cgroup control has ended
[2026-02-08 05:49:34] 2026-02-08 13:49:28,824 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140532936726336)>', '<ExcThread(monitor, started 140532252661504)>']
[2026-02-08 05:49:34] 2026-02-08 13:49:29,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 05:49:34] 2026-02-08 13:49:29,555 | INFO     | [monitor] control thread has ended
[2026-02-08 05:49:34] 2026-02-08 13:49:33,850 | INFO     | all workflow threads have been joined
[2026-02-08 05:49:34] 2026-02-08 13:49:33,850 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 05:49:34] 2026-02-08 13:49:33,850 | INFO     | traces error code: 0
[2026-02-08 05:49:34] 2026-02-08 13:49:33,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 05:49:34] 2026-02-08 13:49:33,961 [wrapper] ==== pilot stdout END ====
[2026-02-08 05:49:34] 2026-02-08 13:49:33,963 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 05:49:34] 2026-02-08 13:49:33,965 [wrapper] pilotpid: 3342182
[2026-02-08 05:49:34] 2026-02-08 13:49:33,966 [wrapper] Pilot exit status: 0
[2026-02-08 05:49:34] 2026-02-08 13:49:33,999 [wrapper] pandaids: 7004480566
[2026-02-08 05:49:34] 2026-02-08 13:49:34,130 [wrapper] cleanup supervisor_pilot 3342192 3342183
[2026-02-08 05:49:34] 2026-02-08 13:49:34,133 [wrapper] Test setup, not cleaning
[2026-02-08 05:49:34] 2026-02-08 13:49:34,134 [wrapper] apfmon messages muted
[2026-02-08 05:49:34] 2026-02-08 13:49:34,136 [wrapper] ==== wrapper stdout END ====
[2026-02-08 05:49:34] 2026-02-08 13:49:34,138 [wrapper] ==== wrapper stderr END ====
[2026-02-08 05:49:34]  *** Error codes and diagnostics ***
[2026-02-08 05:49:34]     "exeErrorCode": 65,
[2026-02-08 05:49:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-08 05:49:34]     "pilotErrorCode": 1305,
[2026-02-08 05:49:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-08 05:49:34]  *** Listing of results directory ***
[2026-02-08 05:49:34] total 484912
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc    584627 Feb  8 01:40 pilot3.tar.gz
[2026-02-08 05:49:34] -rwx------. 1 boinc boinc     36322 Feb  8 01:40 runpilot2-wrapper.sh
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc      5111 Feb  8 01:40 queuedata.json
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc       100 Feb  8 05:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 05:49:34] -rwxr-xr-x. 1 boinc boinc      7986 Feb  8 05:44 run_atlas
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc       105 Feb  8 05:44 job.xml
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc      6593 Feb  8 05:44 init_data.xml
[2026-02-08 05:49:34] -rw-r--r--. 2 boinc boinc 492404138 Feb  8 05:44 EVNT.48442027._000183.pool.root.1
[2026-02-08 05:49:34] -rw-r--r--. 2 boinc boinc     15845 Feb  8 05:44 start_atlas.sh
[2026-02-08 05:49:34] drwxrwx--x. 2 boinc boinc      4096 Feb  8 05:44 shared
[2026-02-08 05:49:34] -rw-r--r--. 2 boinc boinc    597953 Feb  8 05:44 input.tar.gz
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc         0 Feb  8 05:44 boinc_lockfile
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc      2529 Feb  8 05:44 pandaJob.out
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc   1009526 Feb  8 05:45 agis_schedconf.cvmfs.json
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc   1513088 Feb  8 05:45 agis_ddmendpoints.agis.ALL.json
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc       444 Feb  8 05:45 workernode_map.json
[2026-02-08 05:49:34] drwx------. 5 boinc boinc      4096 Feb  8 05:45 pilot3
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc       522 Feb  8 05:46 boinc_task_state.xml
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc       973 Feb  8 05:46 memory_monitor_summary.json
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc     21385 Feb  8 05:46 log.48442031._006225.job.log.tgz.1
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc        95 Feb  8 05:48 pilot_heartbeat.json
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc      7056 Feb  8 05:48 heartbeat.json
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc      8192 Feb  8 05:49 boinc_mmap_file
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc        22 Feb  8 05:49 wrapper_checkpoint.txt
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc      4819 Feb  8 05:49 pilotlog.txt
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc     85413 Feb  8 05:49 log.48442031._006225.job.log.1
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc       188 Feb  8 05:49 output.list
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc       620 Feb  8 05:49 runtime_log
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc    122880 Feb  8 05:49 result.tar.gz
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc       646 Feb  8 05:49 TwNMDm5RG98n9Rq4apOajLDm4fhM0noT9bVooX4SDm9ocKDmpIiX9n.diag
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc      8635 Feb  8 05:49 runtime_log.err
[2026-02-08 05:49:34] -rw-r--r--. 1 boinc boinc     21767 Feb  8 05:49 stderr.txt
[2026-02-08 05:49:34] No HITS result produced
[2026-02-08 05:49:34]  *** Contents of shared directory: ***
[2026-02-08 05:49:34] total 481588
[2026-02-08 05:49:34] -rw-r--r--. 2 boinc boinc 492404138 Feb  8 05:44 ATLAS.root_0
[2026-02-08 05:49:34] -rw-r--r--. 2 boinc boinc     15845 Feb  8 05:44 start_atlas.sh
[2026-02-08 05:49:34] -rw-r--r--. 2 boinc boinc    597953 Feb  8 05:44 input.tar.gz
[2026-02-08 05:49:34] -rw-------. 1 boinc boinc    122880 Feb  8 05:49 result.tar.gz
05:49:36 (3335196): run_atlas exited; CPU time 19.895428
05:49:36 (3335196): called boinc_finish(0)

</stderr_txt>
]]>

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