Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-08 13:45:26 (86495): vboxwrapper version 26210
2026-02-08 13:45:26 (86495): BOINC client version: 8.2.8
2026-02-08 13:45:26 (86495): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-08 13:45:26 (86495): Successfully copied 'init_data.xml' to the shared directory.
2026-02-08 13:45:27 (86495): Create VM. (boinc_6ca2e1537d4f31c8, slot#3)
2026-02-08 13:45:27 (86495): Setting Memory Size for VM. (4100MB)
2026-02-08 13:45:27 (86495): Setting CPU Count for VM. (1)
2026-02-08 13:45:27 (86495): Setting Chipset Options for VM.
2026-02-08 13:45:27 (86495): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-08 13:45:27 (86495): Setting Boot Options for VM.
2026-02-08 13:45:27 (86495): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-08 13:45:27 (86495): Enabling VM Network Access.
2026-02-08 13:45:27 (86495): Disabling USB Support for VM.
2026-02-08 13:45:27 (86495): Disabling COM Port Support for VM.
2026-02-08 13:45:27 (86495): Disabling LPT Port Support for VM.
2026-02-08 13:45:27 (86495): Disabling Audio Support for VM.
2026-02-08 13:45:27 (86495): Disabling Clipboard Support for VM.
2026-02-08 13:45:27 (86495): Disabling Drag and Drop Support for VM.
2026-02-08 13:45:27 (86495): Adding storage controller(s) to VM.
2026-02-08 13:45:27 (86495): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-08 13:45:28 (86495): Adding VirtualBox Guest Additions to VM.
2026-02-08 13:45:28 (86495): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-08 13:45:28 (86495): forwarding host port 55023 to guest port 80
2026-02-08 13:45:28 (86495): Enabling remote desktop for VM.
2026-02-08 13:45:28 (86495): Required extension pack not installed, remote desktop not enabled.
2026-02-08 13:45:28 (86495): Enabling shared directory for VM.
2026-02-08 13:45:28 (86495): Starting VM using VBoxManage interface. (boinc_6ca2e1537d4f31c8, slot#3)
2026-02-08 13:45:29 (86495): Successfully started VM. (PID = '87104')
2026-02-08 13:45:29 (86495): Reporting VM Process ID to BOINC.
2026-02-08 13:45:29 (86495): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-08 13:45:29 (86495): Guest Log: CPUID EDX: 0x178bfbff
2026-02-08 13:45:29 (86495): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-08 13:45:29 (86495): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-08 13:45:29 (86495): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-08 13:45:29 (86495): Detected: Web Application Enabled (http://localhost:55023)
2026-02-08 13:45:29 (86495): Preference change detected
2026-02-08 13:45:29 (86495): Setting CPU throttle for VM. (100%)
2026-02-08 13:45:29 (86495): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-08 13:45:31 (86495): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-08 13:45:31 (86495): Guest Log: BIOS: Booting from Hard Disk...
2026-02-08 13:45:34 (86495): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-08 13:45:34 (86495): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-08 13:45:34 (86495): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-08 13:45:37 (86495): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-08 13:45:37 (86495): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-08 13:45:45 (86495): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-08 13:45:45 (86495): Guest Log: 00:00:00.000149 main     Log opened 2026-02-08T13:45:42.875454000Z
2026-02-08 13:45:45 (86495): Guest Log: 00:00:00.000268 main     OS Product: Linux
2026-02-08 13:45:45 (86495): Guest Log: 00:00:00.000300 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-08 13:45:45 (86495): Guest Log: 00:00:00.000321 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-08 13:45:45 (86495): Guest Log: 00:00:00.000342 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-08 13:45:45 (86495): Guest Log: 00:00:00.000343 main     Process ID: 1251
2026-02-08 13:45:45 (86495): Guest Log: 00:00:00.000343 main     Package type: LINUX_64BITS_GENERIC
2026-02-08 13:45:45 (86495): Guest Log: 00:00:00.001606 main     5.2.32 r132073 started. Verbose level = 0
2026-02-08 13:45:45 (86495): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-08 13:45:45 (86495): Guest Log: [INFO] Mounting shared directory
2026-02-08 13:45:45 (86495): Guest Log: [INFO] Checking for init_data.xml
2026-02-08 13:46:18 (86495): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-08 13:46:18 (86495): Guest Log: [INFO] Detected branch: prod
2026-02-08 13:46:19 (86495): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-08 13:46:19 (86495): Guest Log: Copying input files
2026-02-08 13:46:39 (86495): Guest Log: Copied input files into RunAtlas.
2026-02-08 13:46:39 (86495): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-08 13:46:39 (86495): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-08 13:46:39 (86495): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-08 13:46:39 (86495): Guest Log: Further information can be found at the LHC@home message board.
2026-02-08 13:47:23 (86495): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-08 13:47:23 (86495): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-08 13:47:23 (86495): Guest Log: 2.6.3.0 1544 1 30072 156021 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-08 13:47:24 (86495): Guest Log: copied the webapp to /var/www
2026-02-08 13:47:24 (86495): Guest Log: core_number=1
2026-02-08 13:47:24 (86495): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-08 13:47:24 (86495): Guest Log:  *** Starting ATLAS job. (PandaID=7004480574 taskID=48442031) ***
2026-02-08 15:24:30 (86495): Status Report: Elapsed Time: '6000.087318'
2026-02-08 15:24:30 (86495): Status Report: CPU Time: '5617.710000'
2026-02-08 17:03:30 (86495): Status Report: Elapsed Time: '12000.184281'
2026-02-08 17:03:30 (86495): Status Report: CPU Time: '11557.130000'
2026-02-08 18:42:31 (86495): Status Report: Elapsed Time: '18000.423886'
2026-02-08 18:42:31 (86495): Status Report: CPU Time: '17505.950000'
2026-02-08 20:13:04 (86495): Guest Log:  *** Job finished ***
2026-02-08 20:13:04 (86495): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:09:53,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:07,082 | INFO     | [monitor] cgroup control has ended
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:08,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945444902720)>', '<ExcThread(monitor, started 139944790058752)>']
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:08,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:08,783 | INFO     | [monitor] control thread has ended
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:13,345 | INFO     | all workflow threads have been joined
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:13,345 | INFO     | end of generic workflow (traces error code: 0)
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:13,346 | INFO     | traces error code: 0
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:13,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:13,507 [wrapper] ==== pilot stdout END ====
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:13,511 [wrapper] ==== wrapper stdout RESUME ====
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:13,514 [wrapper] pilotpid: 5888
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:10:13,517 [wrapper] Pilot exit status: 0
2026-02-08 20:13:04 (86495): Guest Log: ./runpilot2-wrapper.sh: line 1019: /usr/bin/xargs: Input/output error
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:13:04,188 [wrapper] pandaids: 
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:13:04,213 [wrapper] cleanup supervisor_pilot 30519 5889
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:13:04,217 [wrapper] Test setup, not cleaning
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:13:04,220 [wrapper] apfmon messages muted
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:13:04,223 [wrapper] ==== wrapper stdout END ====
2026-02-08 20:13:04 (86495): Guest Log: 2026-02-08 20:13:04,226 [wrapper] ==== wrapper stderr END ====
2026-02-08 20:13:04 (86495): Guest Log:  *** Error codes and diagnostics ***
2026-02-08 20:13:04 (86495): Guest Log:     "exeErrorCode": 68,
2026-02-08 20:13:04 (86495): Guest Log:     "exeErrorDiag": "Fatal error in athena logfile: \"Logfile error in log.EVNTtoHITS: \"AthenaPoolCnvSvc                                                 FATAL AthenaPoolCnvSvc::::ExcNoDictForClass: Can't find dictionary information for class: EventStreamInfo_p1\"\"",
2026-02-08 20:13:04 (86495): Guest Log:     "pilotErrorCode": 1305,
2026-02-08 20:13:04 (86495): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformLogfileErrorException: Fatal error in athena logfile: \"Logfile error in log.EVNTtoHITS: \"AthenaPoolCnvSvc                                                 FATAL AthenaPoolCnvSvc:",
2026-02-08 20:13:04 (86495): Guest Log:  *** Listing of results directory ***
2026-02-08 20:13:04 (86495): Guest Log: total 11024
2026-02-08 20:13:04 (86495): Guest Log: -rw-r--r--. 1 atlas atlas  584627 Feb  8 09:40 pilot3.tar.gz
2026-02-08 20:13:04 (86495): Guest Log: -rwx------. 1 atlas atlas   36322 Feb  8 09:40 runpilot2-wrapper.sh
2026-02-08 20:13:04 (86495): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Feb  8 09:40 queuedata.json
2026-02-08 20:13:04 (86495): Guest Log: -rw-r--r--. 1 atlas atlas   15845 Feb  8 13:46 start_atlas.sh
2026-02-08 20:13:04 (86495): Guest Log: -rw-r--r--. 1 atlas atlas    9201 Feb  8 13:46 init_data.xml
2026-02-08 20:13:04 (86495): Guest Log: -rw-r--r--. 1 atlas atlas  597956 Feb  8 13:46 input.tar.gz
2026-02-08 20:13:04 (86495): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb  8 13:46 EVNT.48442027._000183.pool.root.1 -> /data/./ATLAS.root_0
2026-02-08 20:13:04 (86495): Guest Log: -rw-r--r--. 1 atlas atlas    2529 Feb  8 13:47 pandaJob.out
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas 1009526 Feb  8 13:48 agis_schedconf.cvmfs.json
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas     428 Feb  8 13:48 workernode_map.json
2026-02-08 20:13:04 (86495): Guest Log: drwx------. 5 atlas atlas    4096 Feb  8 13:48 pilot3
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas    1028 Feb  8 20:04 memory_monitor_summary.json
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas  514502 Feb  8 20:07 log.48442031._006233.job.log.tgz.1
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas 1513088 Feb  8 20:07 agis_ddmendpoints.agis.ALL.json
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas    8851 Feb  8 20:09 heartbeat.json
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas      95 Feb  8 20:09 pilot_heartbeat.json
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas    4801 Feb  8 20:10 pilotlog.txt
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas 3191934 Feb  8 20:13 log.48442031._006233.job.log.1
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas     188 Feb  8 20:13 output.list
2026-02-08 20:13:04 (86495): Guest Log: -rw-r--r--. 1 atlas atlas    8485 Feb  8 20:13 runtime_log.err
2026-02-08 20:13:04 (86495): Guest Log: -rw-r--r--. 1 atlas atlas     620 Feb  8 20:13 runtime_log
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas 3727360 Feb  8 20:13 result.tar.gz
2026-02-08 20:13:04 (86495): Guest Log: -rw-------. 1 atlas atlas     659 Feb  8 20:13 1VYMDm5RG98n9Rq4apOajLDm4fhM0noT9bVooX4SDmDpcKDmXNCUmn.diag
2026-02-08 20:13:04 (86495): Guest Log: Looking for outputfile HITS.48442031._006233.pool.root.1
2026-02-08 20:13:04 (86495): Guest Log: No HITS file was produced
2026-02-08 20:13:04 (86495): Guest Log: Successfully finished the ATLAS job!
2026-02-08 20:13:04 (86495): Guest Log: Copying the results back to the shared directory!
2026-02-08 20:13:05 (86495): Guest Log:  *** Contents of shared directory: ***
2026-02-08 20:13:05 (86495): Guest Log: total 485120
2026-02-08 20:13:05 (86495): Guest Log: -rw-r--r--. 1 root root 492404138 Feb  8 13:45 ATLAS.root_0
2026-02-08 20:13:05 (86495): Guest Log: -rw-r--r--. 1 root root      9201 Feb  8 13:45 init_data.xml
2026-02-08 20:13:05 (86495): Guest Log: -rw-r--r--. 1 root root    597956 Feb  8 13:45 input.tar.gz
2026-02-08 20:13:05 (86495): Guest Log: -rw-r--r--. 1 root root   3727360 Feb  8 20:13 result.tar.gz
2026-02-08 20:13:05 (86495): Guest Log: -rw-r--r--. 1 root root     15845 Feb  8 13:45 start_atlas.sh
2026-02-08 20:13:05 (86495): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-08 20:13:05 (86495): VM Completion File Detected.
2026-02-08 20:13:05 (86495): Powering off VM.
2026-02-08 20:13:05 (86495): Successfully stopped VM.
2026-02-08 20:13:05 (86495): Deregistering VM. (boinc_6ca2e1537d4f31c8, slot#3)
2026-02-08 20:13:05 (86495): Removing network bandwidth throttle group from VM.
2026-02-08 20:13:05 (86495): Removing VM from VirtualBox.
2026-02-08 20:13:10 (86495): called boinc_finish(0)

</stderr_txt>
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