Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
02:35:57 (153479): wrapper (7.7.26015): starting
02:35:57 (153479): wrapper: running run_atlas (--nthreads 6)
[2026-02-09 02:35:57] Arguments: --nthreads 6
[2026-02-09 02:35:57] Threads: 6
[2026-02-09 02:35:57] Checking for CVMFS
[2026-02-09 02:35:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 02:35:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 02:35:57] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 02:35:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 02:35:57] 2.11.5.0 51193 108 47696 156039 3 60 2554164 4194305 1010 130560 0 197966 99.990 5637 954 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2026-02-09 02:35:57] CVMFS is ok
[2026-02-09 02:35:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 02:35:57] Checking for apptainer binary...
[2026-02-09 02:35:57] apptainer is not installed, using version from CVMFS
[2026-02-09 02:35:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 02:35:57] boinc-b450f
[2026-02-09 02:35:57] apptainer works
[2026-02-09 02:35:57] Set ATHENA_PROC_NUMBER=6
[2026-02-09 02:35:57] Set ATHENA_CORE_NUMBER=6
[2026-02-09 02:35:57] Starting ATLAS job with PandaID=7007172572
[2026-02-09 02:35:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 04:22:21]  *** The last 200 lines of the pilot log: ***
[2026-02-09 04:22:21] 2026-02-09 03:21:39,944 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 04:22:21] 2026-02-09 03:21:39,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 04:22:21] 2026-02-09 03:21:39,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 04:22:21] 2026-02-09 03:21:39,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 04:22:21] 2026-02-09 03:21:39,946 | INFO     | fitting pss+swap vs Time
[2026-02-09 04:22:21] 2026-02-09 03:21:39,946 | INFO     | sum of square deviations: 348769330.0
[2026-02-09 04:22:21] 2026-02-09 03:21:39,947 | INFO     | sum of deviations: 2086390960.499999
[2026-02-09 04:22:21] 2026-02-09 03:21:39,947 | INFO     | mean x: 1770604122.5
[2026-02-09 04:22:21] 2026-02-09 03:21:39,947 | INFO     | mean y: 2505287.548076923
[2026-02-09 04:22:21] 2026-02-09 03:21:39,947 | INFO     | intersect: -10589516768.428099
[2026-02-09 04:22:21] 2026-02-09 03:21:39,947 | INFO     | chi2: 1.4196656629123399
[2026-02-09 04:22:21] 2026-02-09 03:21:39,947 | INFO     | sum of square deviations: 300842850.0
[2026-02-09 04:22:21] 2026-02-09 03:21:39,947 | INFO     | sum of deviations: 2052879298.9999974
[2026-02-09 04:22:21] 2026-02-09 03:21:39,947 | INFO     | mean x: 1770603970.0
[2026-02-09 04:22:21] 2026-02-09 03:21:39,948 | INFO     | mean y: 2505184.0404040404
[2026-02-09 04:22:21] 2026-02-09 03:21:39,948 | INFO     | intersect: -12079670731.857922
[2026-02-09 04:22:21] 2026-02-09 03:21:39,948 | INFO     | chi2: 1.4211563336329105
[2026-02-09 04:22:21] 2026-02-09 03:21:39,948 | INFO     | current chi2=1.4211563336329105 (change=-0.10500153377751131 %)
[2026-02-09 04:22:21] 2026-02-09 03:21:39,948 | INFO     | right removable region: 98
[2026-02-09 04:22:21] 2026-02-09 03:21:39,948 | INFO     | sum of square deviations: 300842850.0
[2026-02-09 04:22:21] 2026-02-09 03:21:39,948 | INFO     | sum of deviations: -10532317583.999998
[2026-02-09 04:22:21] 2026-02-09 03:21:39,948 | INFO     | mean x: 1770604275.0
[2026-02-09 04:22:21] 2026-02-09 03:21:39,948 | INFO     | mean y: 2544212.414141414
[2026-02-09 04:22:21] 2026-02-09 03:21:39,948 | INFO     | intersect: 61990278140.23748
[2026-02-09 04:22:21] 2026-02-09 03:21:39,949 | INFO     | chi2: 0.05838602886463219
[2026-02-09 04:22:21] 2026-02-09 03:21:39,949 | INFO     | current chi2=0.05838602886463219 (change=95.88733950605965 %)
[2026-02-09 04:22:21] 2026-02-09 03:21:39,949 | INFO     | sum of square deviations: 257521107.5
[2026-02-09 04:22:21] 2026-02-09 03:21:39,949 | INFO     | sum of deviations: -9238609210.0
[2026-02-09 04:22:21] 2026-02-09 03:21:39,949 | INFO     | mean x: 1770604427.5
[2026-02-09 04:22:21] 2026-02-09 03:21:39,949 | INFO     | mean y: 2539633.0
[2026-02-09 04:22:21] 2026-02-09 03:21:39,949 | INFO     | intersect: 63523244906.32707
[2026-02-09 04:22:21] 2026-02-09 03:21:39,949 | INFO     | chi2: 0.05800930315472049
[2026-02-09 04:22:21] 2026-02-09 03:21:39,949 | INFO     | current chi2=0.05800930315472049 (change=0.6452326305410109 %)
[2026-02-09 04:22:21] 2026-02-09 03:21:39,950 | INFO     | left removable region: 20
[2026-02-09 04:22:21] 2026-02-09 03:21:39,950 | INFO     | sum of square deviations: 147126479.5
[2026-02-09 04:22:21] 2026-02-09 03:21:39,950 | INFO     | sum of deviations: -5602482780.000003
[2026-02-09 04:22:21] 2026-02-09 03:21:39,950 | INFO     | mean x: 1770604549.5
[2026-02-09 04:22:21] 2026-02-09 03:21:39,950 | INFO     | mean y: 2527118.282051282
[2026-02-09 04:22:21] 2026-02-09 03:21:39,950 | INFO     | intersect: 67426022416.17241
[2026-02-09 04:22:21] 2026-02-09 03:21:39,950 | INFO     | chi2: 0.05213324634065189
[2026-02-09 04:22:21] 2026-02-09 03:21:39,950 | INFO     | current memory leak: -38.08 B/s (using 78 data points, chi2=0.05)
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | could have reported an average CPU frequency of 4024 MHz (7 samples)
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | ..............................
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | . Timing measurements:
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | . get job = 0 s
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | . initial setup = 5 s
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | . payload setup = 1 s
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | . stage-in = 0 s
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | . payload execution = 6314 s
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | . stage-out = 0 s
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | . log creation = 0 s
[2026-02-09 04:22:21] 2026-02-09 03:21:39,951 | INFO     | ..............................
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | 
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | job summary report
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | --------------------------------------------------
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | PanDA job id: 7007172572
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | task id: 48431096
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | errors: (none)
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | pilot state: finished 
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | transexitcode: 0
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | exeerrorcode: 0
[2026-02-09 04:22:21] 2026-02-09 03:21:40,348 | INFO     | exeerrordiag: 
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | exitcode: 0
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | exitmsg: OK
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | cpuconsumptiontime: 36605 s
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | nevents: 400
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | neventsw: 0
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | pid: 169020
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | pgrp: 169020
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | corecount: 6
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | event service: False
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | sizes: {0: 2282593, 1: 2283110, 11: 2283110, 6320: 2310255, 6322: 2319325, 6324: 2319463}
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | --------------------------------------------------
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | 
[2026-02-09 04:22:21] 2026-02-09 03:21:40,349 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/10
[2026-02-09 04:22:21] 2026-02-09 03:21:40,358 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,358 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,358 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,358 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | job 7007172572 has completed (purged errors)
[2026-02-09 04:22:21] 2026-02-09 03:21:40,359 | INFO     | overall cleanup function is called
[2026-02-09 04:22:21] 2026-02-09 03:21:41,364 | INFO     | --- collectZombieJob: --- 10, [169020]
[2026-02-09 04:22:21] 2026-02-09 03:21:41,365 | INFO     | zombie collector waiting for pid 169020
[2026-02-09 04:22:21] 2026-02-09 03:21:41,365 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 04:22:21] 2026-02-09 03:21:41,365 | INFO     | collected zombie processes
[2026-02-09 04:22:21] 2026-02-09 03:21:41,365 | INFO     | will attempt to kill all subprocesses of pid=169020
[2026-02-09 04:22:21] 2026-02-09 03:21:41,427 | INFO     | process IDs to be killed: [169020] (in reverse order)
[2026-02-09 04:22:21] 2026-02-09 03:21:41,448 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 04:22:21] 2026-02-09 03:21:41,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 04:22:21] 2026-02-09 03:21:41,450 | INFO     | did not find any defunct processes belonging to 169020
[2026-02-09 04:22:21] 2026-02-09 03:21:41,452 | INFO     | did not find any defunct processes belonging to 169020
[2026-02-09 04:22:21] 2026-02-09 03:21:41,452 | INFO     | ready for new job
[2026-02-09 04:22:21] 2026-02-09 03:21:41,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 04:22:21] 2026-02-09 03:21:41,453 | INFO     | **************************************
[2026-02-09 04:22:21] 2026-02-09 03:21:41,453 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 04:22:21] 2026-02-09 03:21:41,453 | INFO     | **************************************
[2026-02-09 04:22:21] 2026-02-09 03:21:41,453 | INFO     | 
[2026-02-09 04:22:21] 2026-02-09 03:21:41,454 | INFO     | architecture information:
[2026-02-09 04:22:21] 2026-02-09 03:21:41,454 | INFO     | executing command: cat /etc/os-release
[2026-02-09 04:22:21] 2026-02-09 03:21:41,460 | INFO     | cat /etc/os-release:
[2026-02-09 04:22:21] NAME="CentOS Linux"
[2026-02-09 04:22:21] VERSION="7 (Core)"
[2026-02-09 04:22:21] ID="centos"
[2026-02-09 04:22:21] ID_LIKE="rhel fedora"
[2026-02-09 04:22:21] VERSION_ID="7"
[2026-02-09 04:22:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 04:22:21] ANSI_COLOR="0;31"
[2026-02-09 04:22:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 04:22:21] HOME_URL="https://www.centos.org/"
[2026-02-09 04:22:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 04:22:21] 
[2026-02-09 04:22:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 04:22:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 04:22:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 04:22:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 04:22:21] 
[2026-02-09 04:22:21] 2026-02-09 03:21:41,460 | INFO     | **************************************
[2026-02-09 04:22:21] 2026-02-09 03:21:41,963 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/10
[2026-02-09 04:22:21] 2026-02-09 03:21:41,970 | INFO     | sufficient remaining disk space (19932381184 B)
[2026-02-09 04:22:21] 2026-02-09 03:21:41,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 04:22:21] 2026-02-09 03:21:41,970 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 04:22:21] 2026-02-09 03:21:41,971 | INFO     | update_server=False
[2026-02-09 04:22:21] 2026-02-09 03:21:41,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 04:22:21] 2026-02-09 03:21:41,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 04:22:21] 2026-02-09 03:21:41,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 04:22:21] 2026-02-09 03:21:42,557 | INFO     | all job control threads have been joined
[2026-02-09 04:22:21] 2026-02-09 03:21:42,654 | INFO     | all data control threads have been joined
[2026-02-09 04:22:21] 2026-02-09 03:21:42,975 | INFO     | [job] retrieve thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:42,993 | INFO     | [job] queue monitor thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:43,028 | WARNING  | process 169020 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 04:22:21] 2026-02-09 03:21:43,078 | INFO     | using path: /var/lib/boinc-client/slots/10/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 04:22:21] 2026-02-09 03:21:43,078 | INFO     | using path: /var/lib/boinc-client/slots/10/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 04:22:21] 2026-02-09 03:21:43,078 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-09 04:22:21] 2026-02-09 03:21:43,078 | WARNING  | maxPSS not found in memory monitor output
[2026-02-09 04:22:21] 2026-02-09 03:21:43,079 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/10/PanDA_Pilot-7007172572/payload.stdout) since it has not been created yet
[2026-02-09 04:22:21] 2026-02-09 03:21:43,079 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/10
[2026-02-09 04:22:21] 2026-02-09 03:21:43,086 | INFO     | sufficient remaining disk space (19932381184 B)
[2026-02-09 04:22:21] 2026-02-09 03:21:43,086 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-09 04:22:21] 2026-02-09 03:21:43,086 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/10/PanDA_Pilot-7007172572/HITS.48431096._009961.pool.root.1 since it does not exist
[2026-02-09 04:22:21] 2026-02-09 03:21:43,148 | INFO     | number of running child processes to parent process 169020: 1
[2026-02-09 04:22:21] 2026-02-09 03:21:43,148 | INFO     | maximum number of monitored processes: 6
[2026-02-09 04:22:21] 2026-02-09 03:21:43,149 | INFO     | aborting job monitoring since job object (job id=7007172572) has expired
[2026-02-09 04:22:21] 2026-02-09 03:21:43,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 04:22:21] 2026-02-09 03:21:43,149 | INFO     | will abort loop
[2026-02-09 04:22:21] 2026-02-09 03:21:43,234 | INFO     | all payload control threads have been joined
[2026-02-09 04:22:21] 2026-02-09 03:21:43,562 | INFO     | [job] control thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:43,575 | INFO     | [job] validate thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:43,592 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:43,604 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:43,644 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:43,660 | INFO     | [data] control thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:43,862 | INFO     | [payload] failed_post thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:43,976 | INFO     | [data] copytool_out thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:44,049 | INFO     | [payload] validate_post thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:44,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 04:22:21] 2026-02-09 03:21:44,154 | INFO     | [job] job monitor thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:44,154 | INFO     | [data] copytool_in thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:44,234 | INFO     | [payload] control thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:48,144 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:21:52,674 | INFO     | job.realtimelogging is not enabled
[2026-02-09 04:22:21] 2026-02-09 03:21:53,680 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 04:22:21] 2026-02-09 03:22:12,858 | INFO     | PID=157283 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 04:22:21] 2026-02-09 03:22:12,858 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 04:22:21] 2026-02-09 03:22:12,858 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 04:22:21] 2026-02-09 03:22:12,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 04:22:21] 2026-02-09 03:22:15,804 | INFO     | [monitor] cgroup control has ended
[2026-02-09 04:22:21] 2026-02-09 03:22:16,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731946342208)>', '<ExcThread(monitor, started 139731182544640)>']
[2026-02-09 04:22:21] 2026-02-09 03:22:16,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 04:22:21] 2026-02-09 03:22:16,878 | INFO     | [monitor] control thread has ended
[2026-02-09 04:22:21] 2026-02-09 03:22:21,404 | INFO     | all workflow threads have been joined
[2026-02-09 04:22:21] 2026-02-09 03:22:21,405 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 04:22:21] 2026-02-09 03:22:21,405 | INFO     | traces error code: 0
[2026-02-09 04:22:21] 2026-02-09 03:22:21,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 04:22:21] 2026-02-09 03:22:21,473 [wrapper] ==== pilot stdout END ====
[2026-02-09 04:22:21] 2026-02-09 03:22:21,474 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 04:22:21] 2026-02-09 03:22:21,476 [wrapper] pilotpid: 157283
[2026-02-09 04:22:21] 2026-02-09 03:22:21,477 [wrapper] Pilot exit status: 0
[2026-02-09 04:22:21] 2026-02-09 03:22:21,483 [wrapper] pandaids: 7007172572
[2026-02-09 04:22:21] 2026-02-09 03:22:21,496 [wrapper] cleanup supervisor_pilot  205606 157284
[2026-02-09 04:22:21] 2026-02-09 03:22:21,497 [wrapper] Test setup, not cleaning
[2026-02-09 04:22:21] 2026-02-09 03:22:21,498 [wrapper] apfmon messages muted
[2026-02-09 04:22:21] 2026-02-09 03:22:21,499 [wrapper] ==== wrapper stdout END ====
[2026-02-09 04:22:21] 2026-02-09 03:22:21,500 [wrapper] ==== wrapper stderr END ====
[2026-02-09 04:22:21]  *** Error codes and diagnostics ***
[2026-02-09 04:22:21]     "exeErrorCode": 0,
[2026-02-09 04:22:21]     "exeErrorDiag": "",
[2026-02-09 04:22:21]     "pilotErrorCode": 0,
[2026-02-09 04:22:21]     "pilotErrorDiag": "",
[2026-02-09 04:22:21]  *** Listing of results directory ***
[2026-02-09 04:22:21] total 935776
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc    584627 Feb  8 04:10 pilot3.tar.gz
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc      5111 Feb  8 04:10 queuedata.json
[2026-02-09 04:22:21] -rwx------ 1 boinc boinc     36322 Feb  8 04:11 runpilot2-wrapper.sh
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc       100 Feb  9 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 04:22:21] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 02:35 run_atlas
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc       105 Feb  9 02:35 job.xml
[2026-02-09 04:22:21] -rw-r--r-- 2 boinc boinc     15845 Feb  9 02:35 start_atlas.sh
[2026-02-09 04:22:21] drwxrwx--x 2 boinc boinc         5 Feb  9 02:35 shared
[2026-02-09 04:22:21] -rw-r--r-- 2 boinc boinc    597945 Feb  9 02:35 input.tar.gz
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc      6796 Feb  9 02:35 init_data.xml
[2026-02-09 04:22:21] -rw-r--r-- 2 boinc boinc 679455216 Feb  9 02:35 EVNT.48431094._000421.pool.root.1
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc         0 Feb  9 02:35 boinc_lockfile
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc      2550 Feb  9 02:35 pandaJob.out
[2026-02-09 04:22:21] -rw------- 1 boinc boinc        56 Feb  9 02:35 setup.sh.local
[2026-02-09 04:22:21] -rw------- 1 boinc boinc   1009504 Feb  9 02:36 agis_schedconf.cvmfs.json
[2026-02-09 04:22:21] -rw------- 1 boinc boinc   1513088 Feb  9 02:36 agis_ddmendpoints.agis.ALL.json
[2026-02-09 04:22:21] -rw------- 1 boinc boinc       418 Feb  9 02:36 workernode_map.json
[2026-02-09 04:22:21] drwx------ 5 boinc boinc        22 Feb  9 02:36 pilot3
[2026-02-09 04:22:21] -rw------- 1 boinc boinc 276411066 Feb  9 04:21 HITS.48431096._009961.pool.root.1
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc       530 Feb  9 04:21 boinc_task_state.xml
[2026-02-09 04:22:21] -rw------- 1 boinc boinc      1029 Feb  9 04:21 memory_monitor_summary.json
[2026-02-09 04:22:21] -rw------- 1 boinc boinc    306110 Feb  9 04:21 log.48431096._009961.job.log.tgz.1
[2026-02-09 04:22:21] -rw------- 1 boinc boinc      6292 Feb  9 04:21 heartbeat.json
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc      8192 Feb  9 04:21 boinc_mmap_file
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc        27 Feb  9 04:21 wrapper_checkpoint.txt
[2026-02-09 04:22:21] -rw------- 1 boinc boinc        95 Feb  9 04:22 pilot_heartbeat.json
[2026-02-09 04:22:21] -rw------- 1 boinc boinc      6346 Feb  9 04:22 pilotlog.txt
[2026-02-09 04:22:21] -rw------- 1 boinc boinc    936493 Feb  9 04:22 log.48431096._009961.job.log.1
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc       620 Feb  9 04:22 runtime_log
[2026-02-09 04:22:21] -rw------- 1 boinc boinc   1259520 Feb  9 04:22 result.tar.gz
[2026-02-09 04:22:21] -rw------- 1 boinc boinc       357 Feb  9 04:22 output.list
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc      9481 Feb  9 04:22 runtime_log.err
[2026-02-09 04:22:21] -rw------- 1 boinc boinc       658 Feb  9 04:22 puDLDmBOA98n9Rq4apOajLDm4fhM0noT9bVooX4SDmmEcKDmCAmImm.diag
[2026-02-09 04:22:21] -rw-r--r-- 1 boinc boinc     21187 Feb  9 04:22 stderr.txt
[2026-02-09 04:22:21] HITS file was successfully produced:
[2026-02-09 04:22:21] -rw------- 1 boinc boinc 276411066 Feb  9 04:21 shared/HITS.pool.root.1
[2026-02-09 04:22:21]  *** Contents of shared directory: ***
[2026-02-09 04:22:21] total 934639
[2026-02-09 04:22:21] -rw-r--r-- 2 boinc boinc     15845 Feb  9 02:35 start_atlas.sh
[2026-02-09 04:22:21] -rw-r--r-- 2 boinc boinc    597945 Feb  9 02:35 input.tar.gz
[2026-02-09 04:22:21] -rw-r--r-- 2 boinc boinc 679455216 Feb  9 02:35 ATLAS.root_0
[2026-02-09 04:22:21] -rw------- 1 boinc boinc 276411066 Feb  9 04:21 HITS.pool.root.1
[2026-02-09 04:22:21] -rw------- 1 boinc boinc   1259520 Feb  9 04:22 result.tar.gz
04:22:23 (153479): run_atlas exited; CPU time 36684.358576
04:22:23 (153479): called boinc_finish(0)

</stderr_txt>
]]>

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