Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:26:23 (11389): wrapper (7.7.26015): starting
06:26:23 (11389): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 06:26:23] Arguments: --nthreads 12
[2026-02-08 06:26:23] Threads: 12
[2026-02-08 06:26:23] Checking for CVMFS
[2026-02-08 06:26:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 06:26:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 06:26:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 06:26:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 06:26:23] 2.11.2.0 2979 394180 108048 156018 3 49 19501878 20275200 1 130560 2 168472313 99.954 22787486 16647 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-08 06:26:23] CVMFS is ok
[2026-02-08 06:26:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 06:26:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 06:26:23] Further information can be found at the LHC@home message board.
[2026-02-08 06:26:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 06:26:23] Checking for apptainer binary...
[2026-02-08 06:26:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 06:26:23] Running /usr/bin/apptainer --version
[2026-02-08 06:26:23] apptainer version 1.3.2-1.el7
[2026-02-08 06:26:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 06:26:25] c-205-7.aglt2.org
[2026-02-08 06:26:25] apptainer works
[2026-02-08 06:26:25] Set ATHENA_PROC_NUMBER=12
[2026-02-08 06:26:25] Set ATHENA_CORE_NUMBER=12
[2026-02-08 06:26:25] Starting ATLAS job with PandaID=7004226654
[2026-02-08 06:26:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 08:06:08]  *** The last 200 lines of the pilot log: ***
[2026-02-08 08:06:08]  filetype=log
[2026-02-08 08:06:08]  guid=a2fa8a62-764a-46f1-8762-e576cf356ae2
[2026-02-08 08:06:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 08:06:08]  is_altstaged=None
[2026-02-08 08:06:08]  is_tar=False
[2026-02-08 08:06:08]  lfn=log.48431113._006852.job.log.tgz.1
[2026-02-08 08:06:08]  mtime=0
[2026-02-08 08:06:08]  protocol_id=None
[2026-02-08 08:06:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 08:06:08]  replicas=None
[2026-02-08 08:06:08]  scope=mc23_13p6TeV
[2026-02-08 08:06:08]  status=None
[2026-02-08 08:06:08]  status_code=0
[2026-02-08 08:06:08]  storage_token=
[2026-02-08 08:06:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7004226654/log.48431113._006852.job.log.tgz.1
[2026-02-08 08:06:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/62/log.48431113._006852.job.log.tgz.1
[2026-02-08 08:06:08]  workdir=None
[2026-02-08 08:06:08] ]
[2026-02-08 08:06:08] 2026-02-08 13:05:33,339 | INFO     | transferring file log.48431113._006852.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7004226654/log.48431113._006852.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-08 08:06:08] 2026-02-08 13:05:33,339 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7004226654/log.48431113._006852.job.log.tgz.1 /tmp/boinchome/slots/0/log.48431113._006852.job
[2026-02-08 08:06:08] 2026-02-08 13:05:33,360 | INFO     | adding to output.list: log.48431113._006852.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/62/log.48431113._006852.job.log.tg
[2026-02-08 08:06:08] 2026-02-08 13:05:33,361 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 08:06:08] 2026-02-08 13:05:33,361 | INFO     | summary of transferred files:
[2026-02-08 08:06:08] 2026-02-08 13:05:33,361 | INFO     |  -- lfn=log.48431113._006852.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 08:06:08] 2026-02-08 13:05:33,362 | INFO     | stage-out finished correctly
[2026-02-08 08:06:08] 2026-02-08 13:05:33,793 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 08:06:08] 2026-02-08 13:05:35,174 | INFO     | time since job start (5930s) is within the limit (349056.0s)
[2026-02-08 08:06:08] 2026-02-08 13:05:35,967 | INFO     | job 7004226654 has state=finished
[2026-02-08 08:06:08] 2026-02-08 13:05:35,968 | INFO     | preparing for final server update for job 7004226654 in state='finished'
[2026-02-08 08:06:08] 2026-02-08 13:05:35,968 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7004226654/jobReport.json
[2026-02-08 08:06:08] 2026-02-08 13:05:35,971 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-08 08:06:08] 2026-02-08 13:05:35,971 | INFO     | this job has now completed (state=finished)
[2026-02-08 08:06:08] 2026-02-08 13:05:35,971 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 08:06:08] 2026-02-08 13:05:35,972 | INFO     | log transfer has been attempted: DONE
[2026-02-08 08:06:08] 2026-02-08 13:05:35,972 | INFO     | job 7004226654 has finished - writing final server update
[2026-02-08 08:06:08] 2026-02-08 13:05:35,972 | INFO     | total number of processed events: 400 (read)
[2026-02-08 08:06:08] 2026-02-08 13:05:35,975 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7004226654/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 08:06:08] 2026-02-08 13:05:35,976 | INFO     | extracted standard info from prmon json
[2026-02-08 08:06:08] 2026-02-08 13:05:35,976 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 08:06:08] 2026-02-08 13:05:35,976 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 08:06:08] 2026-02-08 13:05:35,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 08:06:08] 2026-02-08 13:05:35,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 08:06:08] 2026-02-08 13:05:35,978 | INFO     | fitting pss+swap vs Time
[2026-02-08 08:06:08] 2026-02-08 13:05:35,978 | INFO     | sum of square deviations: 226022842.5
[2026-02-08 08:06:08] 2026-02-08 13:05:35,979 | INFO     | sum of deviations: -12597050677.500002
[2026-02-08 08:06:08] 2026-02-08 13:05:35,979 | INFO     | mean x: 1770553048.5
[2026-02-08 08:06:08] 2026-02-08 13:05:35,979 | INFO     | mean y: 2897245.8333333335
[2026-02-08 08:06:08] 2026-02-08 13:05:35,979 | INFO     | intersect: 98682067158.30188
[2026-02-08 08:06:08] 2026-02-08 13:05:35,979 | INFO     | chi2: 0.1270998195958016
[2026-02-08 08:06:08] 2026-02-08 13:05:35,979 | INFO     | current memory leak: -55.73 B/s (using 90 data points, chi2=0.13)
[2026-02-08 08:06:08] 2026-02-08 13:05:35,979 | INFO     | could have reported an average CPU frequency of 1684 MHz (7 samples)
[2026-02-08 08:06:08] 2026-02-08 13:05:35,980 | INFO     | ..............................
[2026-02-08 08:06:08] 2026-02-08 13:05:35,980 | INFO     | . Timing measurements:
[2026-02-08 08:06:08] 2026-02-08 13:05:35,980 | INFO     | . get job = 0 s
[2026-02-08 08:06:08] 2026-02-08 13:05:35,980 | INFO     | . initial setup = 7 s
[2026-02-08 08:06:08] 2026-02-08 13:05:35,980 | INFO     | . payload setup = 7 s
[2026-02-08 08:06:08] 2026-02-08 13:05:35,980 | INFO     | . stage-in = 0 s
[2026-02-08 08:06:08] 2026-02-08 13:05:35,980 | INFO     | . payload execution = 5905 s
[2026-02-08 08:06:08] 2026-02-08 13:05:35,980 | INFO     | . stage-out = 0 s
[2026-02-08 08:06:08] 2026-02-08 13:05:35,980 | INFO     | . log creation = 0 s
[2026-02-08 08:06:08] 2026-02-08 13:05:35,981 | INFO     | ..............................
[2026-02-08 08:06:08] 2026-02-08 13:05:36,058 | INFO     | 
[2026-02-08 08:06:08] 2026-02-08 13:05:36,059 | INFO     | job summary report
[2026-02-08 08:06:08] 2026-02-08 13:05:36,059 | INFO     | --------------------------------------------------
[2026-02-08 08:06:08] 2026-02-08 13:05:36,059 | INFO     | PanDA job id: 7004226654
[2026-02-08 08:06:08] 2026-02-08 13:05:36,059 | INFO     | task id: 48431113
[2026-02-08 08:06:08] 2026-02-08 13:05:36,059 | INFO     | errors: (none)
[2026-02-08 08:06:08] 2026-02-08 13:05:36,059 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 08:06:08] 2026-02-08 13:05:36,060 | INFO     | pilot state: finished 
[2026-02-08 08:06:08] 2026-02-08 13:05:36,060 | INFO     | transexitcode: 0
[2026-02-08 08:06:08] 2026-02-08 13:05:36,060 | INFO     | exeerrorcode: 0
[2026-02-08 08:06:08] 2026-02-08 13:05:36,060 | INFO     | exeerrordiag: 
[2026-02-08 08:06:08] 2026-02-08 13:05:36,060 | INFO     | exitcode: 0
[2026-02-08 08:06:08] 2026-02-08 13:05:36,060 | INFO     | exitmsg: OK
[2026-02-08 08:06:08] 2026-02-08 13:05:36,060 | INFO     | cpuconsumptiontime: 63884 s
[2026-02-08 08:06:08] 2026-02-08 13:05:36,061 | INFO     | nevents: 400
[2026-02-08 08:06:08] 2026-02-08 13:05:36,061 | INFO     | neventsw: 0
[2026-02-08 08:06:08] 2026-02-08 13:05:36,061 | INFO     | pid: 19528
[2026-02-08 08:06:08] 2026-02-08 13:05:36,061 | INFO     | pgrp: 19528
[2026-02-08 08:06:08] 2026-02-08 13:05:36,061 | INFO     | corecount: 12
[2026-02-08 08:06:08] 2026-02-08 13:05:36,061 | INFO     | event service: False
[2026-02-08 08:06:08] 2026-02-08 13:05:36,062 | INFO     | sizes: {0: 2283119, 11: 2283119, 5915: 2309817, 5916: 2309816, 5917: 2318926, 5919: 2319064}
[2026-02-08 08:06:08] 2026-02-08 13:05:36,062 | INFO     | --------------------------------------------------
[2026-02-08 08:06:08] 2026-02-08 13:05:36,062 | INFO     | 
[2026-02-08 08:06:08] 2026-02-08 13:05:36,062 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-08 08:06:08] 2026-02-08 13:05:36,087 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,087 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,087 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,088 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,088 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,089 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,089 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,089 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,089 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,089 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,090 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 08:06:08] 2026-02-08 13:05:36,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,090 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 08:06:08] 2026-02-08 13:05:36,091 | INFO     | job 7004226654 has completed (purged errors)
[2026-02-08 08:06:08] 2026-02-08 13:05:36,091 | INFO     | overall cleanup function is called
[2026-02-08 08:06:08] 2026-02-08 13:05:37,099 | INFO     | --- collectZombieJob: --- 10, [19528]
[2026-02-08 08:06:08] 2026-02-08 13:05:37,100 | INFO     | zombie collector waiting for pid 19528
[2026-02-08 08:06:08] 2026-02-08 13:05:37,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 08:06:08] 2026-02-08 13:05:37,100 | INFO     | collected zombie processes
[2026-02-08 08:06:08] 2026-02-08 13:05:37,100 | INFO     | will attempt to kill all subprocesses of pid=19528
[2026-02-08 08:06:08] 2026-02-08 13:05:37,193 | INFO     | process IDs to be killed: [19528] (in reverse order)
[2026-02-08 08:06:08] 2026-02-08 13:05:37,245 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 08:06:08] 2026-02-08 13:05:37,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 08:06:08] 2026-02-08 13:05:37,248 | INFO     | did not find any defunct processes belonging to 19528
[2026-02-08 08:06:08] 2026-02-08 13:05:37,251 | INFO     | did not find any defunct processes belonging to 19528
[2026-02-08 08:06:08] 2026-02-08 13:05:37,251 | INFO     | ready for new job
[2026-02-08 08:06:08] 2026-02-08 13:05:37,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 08:06:08] 2026-02-08 13:05:37,252 | INFO     | **************************************
[2026-02-08 08:06:08] 2026-02-08 13:05:37,252 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 08:06:08] 2026-02-08 13:05:37,252 | INFO     | **************************************
[2026-02-08 08:06:08] 2026-02-08 13:05:37,253 | INFO     | 
[2026-02-08 08:06:08] 2026-02-08 13:05:37,253 | INFO     | architecture information:
[2026-02-08 08:06:08] 2026-02-08 13:05:37,254 | INFO     | executing command: cat /etc/os-release
[2026-02-08 08:06:08] 2026-02-08 13:05:37,269 | INFO     | cat /etc/os-release:
[2026-02-08 08:06:08] NAME="CentOS Linux"
[2026-02-08 08:06:08] VERSION="7 (Core)"
[2026-02-08 08:06:08] ID="centos"
[2026-02-08 08:06:08] ID_LIKE="rhel fedora"
[2026-02-08 08:06:08] VERSION_ID="7"
[2026-02-08 08:06:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 08:06:08] ANSI_COLOR="0;31"
[2026-02-08 08:06:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 08:06:08] HOME_URL="https://www.centos.org/"
[2026-02-08 08:06:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 08:06:08] 
[2026-02-08 08:06:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 08:06:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 08:06:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 08:06:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 08:06:08] 
[2026-02-08 08:06:08] 2026-02-08 13:05:37,269 | INFO     | **************************************
[2026-02-08 08:06:08] 2026-02-08 13:05:37,772 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-08 08:06:08] 2026-02-08 13:05:37,789 | INFO     | sufficient remaining disk space (28423749632 B)
[2026-02-08 08:06:08] 2026-02-08 13:05:37,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 08:06:08] 2026-02-08 13:05:37,790 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 08:06:08] 2026-02-08 13:05:37,790 | INFO     | update_server=False
[2026-02-08 08:06:08] 2026-02-08 13:05:37,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 08:06:08] 2026-02-08 13:05:37,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 08:06:08] 2026-02-08 13:05:38,133 | INFO     | all data control threads have been joined
[2026-02-08 08:06:08] 2026-02-08 13:05:38,316 | INFO     | all job control threads have been joined
[2026-02-08 08:06:08] 2026-02-08 13:05:38,499 | WARNING  | process 19528 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 08:06:08] 2026-02-08 13:05:38,575 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 08:06:08] 2026-02-08 13:05:38,664 | INFO     | number of running child processes to parent process 19528: 1
[2026-02-08 08:06:08] 2026-02-08 13:05:38,664 | INFO     | maximum number of monitored processes: 6
[2026-02-08 08:06:08] 2026-02-08 13:05:38,664 | INFO     | aborting job monitoring since job object (job id=7004226654) has expired
[2026-02-08 08:06:08] 2026-02-08 13:05:38,664 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 08:06:08] 2026-02-08 13:05:38,664 | INFO     | will abort loop
[2026-02-08 08:06:08] 2026-02-08 13:05:38,796 | INFO     | [job] retrieve thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:38,796 | INFO     | [job] queue monitor thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:38,852 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:38,865 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:38,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 08:06:08] 2026-02-08 13:05:39,008 | INFO     | all payload control threads have been joined
[2026-02-08 08:06:08] 2026-02-08 13:05:39,139 | INFO     | [data] copytool_in thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:39,139 | INFO     | [data] control thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:39,321 | INFO     | [job] control thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:39,419 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:39,425 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:39,670 | INFO     | [job] job monitor thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:39,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 08:06:08] 2026-02-08 13:05:39,898 | INFO     | [payload] validate_post thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:40,013 | INFO     | [payload] control thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:40,024 | INFO     | [job] validate thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:40,067 | INFO     | [payload] failed_post thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:40,958 | INFO     | [data] copytool_out thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:43,882 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 08:06:08] 2026-02-08 13:05:54,143 | INFO     | [monitor] cgroup control has ended
[2026-02-08 08:06:08] 2026-02-08 13:05:54,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140304460556096)>', '<ExcThread(monitor, started 140303856019200)>']
[2026-02-08 08:06:08] 2026-02-08 13:05:59,656 | INFO     | all workflow threads have been joined
[2026-02-08 08:06:08] 2026-02-08 13:05:59,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 08:06:08] 2026-02-08 13:05:59,656 | INFO     | traces error code: 0
[2026-02-08 08:06:08] 2026-02-08 13:05:59,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 08:06:08] 2026-02-08 13:06:08,385 | INFO     | PID=15084 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-08 08:06:08] 2026-02-08 13:06:08,386 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 08:06:08] 2026-02-08 13:06:08,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 08:06:08] 2026-02-08 13:06:08,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 08:06:08] 2026-02-08 13:06:08,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 08:06:08] 2026-02-08 13:06:08,386 | INFO     | [monitor] control thread has ended
[2026-02-08 08:06:08] 2026-02-08 13:06:08,481 [wrapper] ==== pilot stdout END ====
[2026-02-08 08:06:08] 2026-02-08 13:06:08,485 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 08:06:08] 2026-02-08 13:06:08,489 [wrapper] pilotpid: 15084
[2026-02-08 08:06:08] 2026-02-08 13:06:08,493 [wrapper] Pilot exit status: 0
[2026-02-08 08:06:08] 2026-02-08 13:06:08,510 [wrapper] pandaids: 7004226654
[2026-02-08 08:06:08] 2026-02-08 13:06:08,549 [wrapper] cleanup supervisor_pilot 12842 15085
[2026-02-08 08:06:08] 2026-02-08 13:06:08,553 [wrapper] Test setup, not cleaning
[2026-02-08 08:06:08] 2026-02-08 13:06:08,556 [wrapper] apfmon messages muted
[2026-02-08 08:06:08] 2026-02-08 13:06:08,560 [wrapper] ==== wrapper stdout END ====
[2026-02-08 08:06:08] 2026-02-08 13:06:08,563 [wrapper] ==== wrapper stderr END ====
[2026-02-08 08:06:08]  *** Error codes and diagnostics ***
[2026-02-08 08:06:08]     "exeErrorCode": 0,
[2026-02-08 08:06:08]     "exeErrorDiag": "",
[2026-02-08 08:06:08]     "pilotErrorCode": 0,
[2026-02-08 08:06:08]     "pilotErrorDiag": "",
[2026-02-08 08:06:08]  *** Listing of results directory ***
[2026-02-08 08:06:08] total 887468
[2026-02-08 08:06:08] -rwx------ 1 boincer umatlas     36322 Feb  8 02:07 runpilot2-wrapper.sh
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas      5111 Feb  8 02:07 queuedata.json
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas    584627 Feb  8 02:08 pilot3.tar.gz
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas       100 Feb  8 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 08:06:08] -rwxr-xr-x 1 boincer umatlas      7986 Feb  8 06:26 run_atlas
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas       105 Feb  8 06:26 job.xml
[2026-02-08 08:06:08] -rw-r--r-- 2 boincer umatlas 648165884 Feb  8 06:26 EVNT.48431111._000135.pool.root.1
[2026-02-08 08:06:08] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 06:26 start_atlas.sh
[2026-02-08 08:06:08] drwxrwx--x 2 boincer umatlas      4096 Feb  8 06:26 shared
[2026-02-08 08:06:08] -rw-r--r-- 2 boincer umatlas    597951 Feb  8 06:26 input.tar.gz
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas         0 Feb  8 06:26 boinc_lockfile
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas      2545 Feb  8 06:26 pandaJob.out
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas        57 Feb  8 06:26 setup.sh.local
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas   1009518 Feb  8 06:26 agis_schedconf.cvmfs.json
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas   1513088 Feb  8 06:26 agis_ddmendpoints.agis.ALL.json
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas       433 Feb  8 06:26 workernode_map.json
[2026-02-08 08:06:08] drwx------ 5 boincer umatlas      4096 Feb  8 06:26 pilot3
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas      5952 Feb  8 08:01 init_data.xml
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas 254112019 Feb  8 08:04 HITS.48431113._006852.pool.root.1
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas       530 Feb  8 08:05 boinc_task_state.xml
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas      1046 Feb  8 08:05 memory_monitor_summary.json
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas    426970 Feb  8 08:05 log.48431113._006852.job.log.tgz.1
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas      6408 Feb  8 08:05 heartbeat.json
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas        27 Feb  8 08:05 wrapper_checkpoint.txt
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas      8192 Feb  8 08:05 boinc_mmap_file
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas       745 Feb  8 08:06 pilotlog.txt
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas        95 Feb  8 08:06 pilot_heartbeat.json
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas    847201 Feb  8 08:06 log.48431113._006852.job.log.1
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas       357 Feb  8 08:06 output.list
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas       620 Feb  8 08:06 runtime_log
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas   1290240 Feb  8 08:06 result.tar.gz
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas       658 Feb  8 08:06 sJtMDmR4D98n9Rq4apOajLDm4fhM0noT9bVooX4SDmaccKDmfLRG5m.diag
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas      9338 Feb  8 08:06 runtime_log.err
[2026-02-08 08:06:08] -rw-r--r-- 1 boincer umatlas     21304 Feb  8 08:06 stderr.txt
[2026-02-08 08:06:08] HITS file was successfully produced:
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas 254112019 Feb  8 08:04 shared/HITS.pool.root.1
[2026-02-08 08:06:08]  *** Contents of shared directory: ***
[2026-02-08 08:06:08] total 883004
[2026-02-08 08:06:08] -rw-r--r-- 2 boincer umatlas 648165884 Feb  8 06:26 ATLAS.root_0
[2026-02-08 08:06:08] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 06:26 start_atlas.sh
[2026-02-08 08:06:08] -rw-r--r-- 2 boincer umatlas    597951 Feb  8 06:26 input.tar.gz
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas 254112019 Feb  8 08:04 HITS.pool.root.1
[2026-02-08 08:06:08] -rw------- 1 boincer umatlas   1290240 Feb  8 08:06 result.tar.gz
08:06:09 (11389): run_atlas exited; CPU time 63869.888496
08:06:09 (11389): called boinc_finish(0)

</stderr_txt>
]]>

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