Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:59:32 (85558): wrapper (7.7.26015): starting
21:59:32 (85558): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 21:59:32] Arguments: --nthreads 12
[2026-02-07 21:59:32] Threads: 12
[2026-02-07 21:59:32] Checking for CVMFS
[2026-02-07 21:59:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 21:59:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 21:59:33] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 21:59:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 21:59:34] 2.11.5.0 1269751 34890 215368 156009 0 237 40402219 45568001 31778 130560 0 343562638 99.840 173334220 24554 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-07 21:59:34] CVMFS is ok
[2026-02-07 21:59:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 21:59:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 21:59:34] Further information can be found at the LHC@home message board.
[2026-02-07 21:59:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 21:59:34] Checking for apptainer binary...
[2026-02-07 21:59:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 21:59:34] Running /usr/bin/apptainer --version
[2026-02-07 21:59:34] apptainer version 1.4.1-1.el9
[2026-02-07 21:59:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 21:59:35] wns0072.triumf.lcg
[2026-02-07 21:59:35] apptainer works
[2026-02-07 21:59:35] Set ATHENA_PROC_NUMBER=12
[2026-02-07 21:59:35] Set ATHENA_CORE_NUMBER=12
[2026-02-07 21:59:35] Starting ATLAS job with PandaID=6999842634
[2026-02-07 21:59:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 22:04:23]  *** The last 200 lines of the pilot log: ***
[2026-02-07 22:04:23] 2026-02-08 06:03:32,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 22:04:23] 2026-02-08 06:03:32,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | WARNING  | wrong length of table data, x=[1770530470.0], y=[1697.0] (must be same and length>=4)
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | could have reported an average CPU frequency of 2766 MHz (4 samples)
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | ..............................
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | . Timing measurements:
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | . get job = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | . initial setup = 17 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . payload setup = 22 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . stage-in = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . payload execution = 37 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . stage-out = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . log creation = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | ..............................
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6999842634/pilotlog.txt
[2026-02-07 22:04:23] 2026-02-08 06:03:32,893 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-07 22:04:23] - Log from pilotlog.txt -
[2026-02-07 22:04:23] 2026-02-08 06:03:32,832 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6999842634/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 22:04:23] 2026-02-08 06:03:32,833 | INFO     | extracted standard info from prmon json
[2026-02-07 22:04:23] 2026-02-08 06:03:32,833 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 22:04:23] 2026-02-08 06:03:32,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 22:04:23] 2026-02-08 06:03:32,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | WARNING  | wrong length of table data, x=[1770530470.0], y=[1697.0] (must be same and length>=4)
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | could have reported an average CPU frequency of 2766 MHz (4 samples)
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | ..............................
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | . Timing measurements:
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | . get job = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | . initial setup = 17 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . payload setup = 22 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . stage-in = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . payload execution = 37 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . stage-out = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . log creation = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | ..............................
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6999842634/pilotlog.txt
[2026-02-07 22:04:23] 2026-02-08 06:03:32,893 | WARNING  | 
[2026-02-07 22:04:23] [begin log extracts]
[2026-02-07 22:04:23] - Log from pilotlog.txt -
[2026-02-07 22:04:23] 2026-02-08 06:03:32,832 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6999842634/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 22:04:23] 2026-02-08 06:03:32,833 | INFO     | extracted standard info from prmon json
[2026-02-07 22:04:23] 2026-02-08 06:03:32,833 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 22:04:23] 2026-02-08 06:03:32,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 22:04:23] 2026-02-08 06:03:32,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | WARNING  | wrong length of table data, x=[1770530470.0], y=[1697.0] (must be same and length>=4)
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | could have reported an average CPU frequency of 2766 MHz (4 samples)
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | ..............................
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | . Timing measurements:
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | . get job = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,834 | INFO     | . initial setup = 17 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . payload setup = 22 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . stage-in = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . payload execution = 37 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . stage-out = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | . log creation = 0 s
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | ..............................
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 22:04:23] 2026-02-08 06:03:32,835 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6999842634/pilotlog.txt
[2026-02-07 22:04:23] [end log extracts]
[2026-02-07 22:04:23] 2026-02-08 06:03:32,893 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-07 22:04:23] 2026-02-08 06:03:32,894 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | 
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | job summary report
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | --------------------------------------------------
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | PanDA job id: 6999842634
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | task id: 48317892
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-07 22:01:25,269 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | pilot state: failed 
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | transexitcode: 65
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | exeerrorcode: 65
[2026-02-07 22:04:23] 2026-02-08 06:03:33,353 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | exitcode: 65
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | cpuconsumptiontime: 13 s
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | nevents: 0
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | neventsw: 0
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | pid: 94353
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | pgrp: 94353
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | corecount: 12
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | event service: False
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | sizes: {0: 2282549, 1: 2282633, 2: 2283066, 13: 2283094, 65: 2306461, 66: 2310969, 183: 2311107}
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | --------------------------------------------------
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | 
[2026-02-07 22:04:23] 2026-02-08 06:03:33,354 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-07 22:04:23] 2026-02-08 06:03:33,408 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,408 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,408 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,408 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,409 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,409 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,413 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 22:04:23] 2026-02-08 06:03:33,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,413 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 22:04:23] 2026-02-08 06:03:33,413 | INFO     | job 6999842634 has completed (purged errors)
[2026-02-07 22:04:23] 2026-02-08 06:03:33,413 | INFO     | overall cleanup function is called
[2026-02-07 22:04:23] 2026-02-08 06:03:34,420 | INFO     | --- collectZombieJob: --- 10, [94353]
[2026-02-07 22:04:23] 2026-02-08 06:03:34,420 | INFO     | zombie collector waiting for pid 94353
[2026-02-07 22:04:23] 2026-02-08 06:03:34,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 22:04:23] 2026-02-08 06:03:34,420 | INFO     | collected zombie processes
[2026-02-07 22:04:23] 2026-02-08 06:03:34,420 | INFO     | will attempt to kill all subprocesses of pid=94353
[2026-02-07 22:04:23] 2026-02-08 06:03:34,667 | INFO     | process IDs to be killed: [94353] (in reverse order)
[2026-02-07 22:04:23] 2026-02-08 06:03:34,752 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 22:04:23] 2026-02-08 06:03:34,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 22:04:23] 2026-02-08 06:03:34,763 | INFO     | did not find any defunct processes belonging to 94353
[2026-02-07 22:04:23] 2026-02-08 06:03:34,774 | INFO     | did not find any defunct processes belonging to 94353
[2026-02-07 22:04:23] 2026-02-08 06:03:34,774 | INFO     | ready for new job
[2026-02-07 22:04:23] 2026-02-08 06:03:34,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 22:04:23] 2026-02-08 06:03:34,776 | INFO     | **************************************
[2026-02-07 22:04:23] 2026-02-08 06:03:34,776 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-07 22:04:23] 2026-02-08 06:03:34,776 | INFO     | **************************************
[2026-02-07 22:04:23] 2026-02-08 06:03:34,776 | INFO     | 
[2026-02-07 22:04:23] 2026-02-08 06:03:34,778 | INFO     | architecture information:
[2026-02-07 22:04:23] 2026-02-08 06:03:34,778 | INFO     | executing command: cat /etc/os-release
[2026-02-07 22:04:23] 2026-02-08 06:03:34,790 | INFO     | cat /etc/os-release:
[2026-02-07 22:04:23] NAME="CentOS Linux"
[2026-02-07 22:04:23] VERSION="7 (Core)"
[2026-02-07 22:04:23] ID="centos"
[2026-02-07 22:04:23] ID_LIKE="rhel fedora"
[2026-02-07 22:04:23] VERSION_ID="7"
[2026-02-07 22:04:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 22:04:23] ANSI_COLOR="0;31"
[2026-02-07 22:04:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 22:04:23] HOME_URL="https://www.centos.org/"
[2026-02-07 22:04:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 22:04:23] 
[2026-02-07 22:04:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 22:04:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 22:04:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 22:04:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 22:04:23] 
[2026-02-07 22:04:23] 2026-02-08 06:03:34,790 | INFO     | **************************************
[2026-02-07 22:04:23] 2026-02-08 06:03:35,295 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-07 22:04:23] 2026-02-08 06:03:35,417 | INFO     | sufficient remaining disk space (2073090326528 B)
[2026-02-07 22:04:23] 2026-02-08 06:03:35,417 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 22:04:23] 2026-02-08 06:03:35,417 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 22:04:23] 2026-02-08 06:03:35,417 | INFO     | update_server=False
[2026-02-07 22:04:23] 2026-02-08 06:03:35,418 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 22:04:23] 2026-02-08 06:03:35,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 22:04:23] 2026-02-08 06:03:35,418 | INFO     | aborting loop
[2026-02-07 22:04:23] 2026-02-08 06:03:35,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 22:04:23] 2026-02-08 06:03:35,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 22:04:23] 2026-02-08 06:03:35,891 | INFO     | all data control threads have been joined
[2026-02-07 22:04:23] 2026-02-08 06:03:36,158 | INFO     | all payload control threads have been joined
[2026-02-07 22:04:23] 2026-02-08 06:03:36,322 | INFO     | all job control threads have been joined
[2026-02-07 22:04:23] 2026-02-08 06:03:36,424 | INFO     | [job] job monitor thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:36,424 | INFO     | [job] retrieve thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:36,822 | INFO     | [payload] failed_post thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:36,897 | INFO     | [data] control thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:36,901 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:37,164 | INFO     | [payload] control thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:37,274 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:37,329 | INFO     | [job] control thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:37,426 | INFO     | [data] copytool_out thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:37,464 | INFO     | [payload] validate_post thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:37,715 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:37,715 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:37,736 | INFO     | [job] validate thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:37,889 | INFO     | [data] copytool_in thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:38,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 22:04:23] 2026-02-08 06:03:39,213 | INFO     | [job] queue monitor thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:03:39,450 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 22:04:23] 2026-02-08 06:04:06,163 | INFO     | PID=89357 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 22:04:23] 2026-02-08 06:04:06,164 | INFO     | .. there are 49 such processes running
[2026-02-07 22:04:23] 2026-02-08 06:04:06,164 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 22:04:23] 2026-02-08 06:04:06,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 22:04:23] 2026-02-08 06:04:06,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 22:04:23] 2026-02-08 06:04:16,438 | INFO     | [monitor] cgroup control has ended
[2026-02-07 22:04:23] 2026-02-08 06:04:17,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935305869120)>', '<ExcThread(monitor, started 139934757267200)>']
[2026-02-07 22:04:23] 2026-02-08 06:04:18,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 22:04:23] 2026-02-08 06:04:18,234 | INFO     | [monitor] control thread has ended
[2026-02-07 22:04:23] 2026-02-08 06:04:22,721 | INFO     | all workflow threads have been joined
[2026-02-07 22:04:23] 2026-02-08 06:04:22,721 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 22:04:23] 2026-02-08 06:04:22,721 | INFO     | traces error code: 0
[2026-02-07 22:04:23] 2026-02-08 06:04:22,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 22:04:23] 2026-02-08 06:04:23,356 [wrapper] ==== pilot stdout END ====
[2026-02-07 22:04:23] 2026-02-08 06:04:23,367 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 22:04:23] 2026-02-08 06:04:23,379 [wrapper] pilotpid: 89357
[2026-02-07 22:04:23] 2026-02-08 06:04:23,402 [wrapper] Pilot exit status: 0
[2026-02-07 22:04:23] 2026-02-08 06:04:23,439 [wrapper] pandaids: 6999842634
[2026-02-07 22:04:23] 2026-02-08 06:04:23,578 [wrapper] cleanup supervisor_pilot   89363 89358
[2026-02-07 22:04:23] 2026-02-08 06:04:23,581 [wrapper] Test setup, not cleaning
[2026-02-07 22:04:23] 2026-02-08 06:04:23,582 [wrapper] apfmon messages muted
[2026-02-07 22:04:23] 2026-02-08 06:04:23,584 [wrapper] ==== wrapper stdout END ====
[2026-02-07 22:04:23] 2026-02-08 06:04:23,586 [wrapper] ==== wrapper stderr END ====
[2026-02-07 22:04:23]  *** Error codes and diagnostics ***
[2026-02-07 22:04:23]     "exeErrorCode": 65,
[2026-02-07 22:04:23]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 22:04:23]     "pilotErrorCode": 1305,
[2026-02-07 22:04:23]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 22:04:23]  *** Listing of results directory ***
[2026-02-07 22:04:23] total 484556
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc    584422 Feb  3 09:17 pilot3.tar.gz
[2026-02-07 22:04:23] -rwx------. 1 boinc boinc     36322 Feb  3 09:18 runpilot2-wrapper.sh
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc      5111 Feb  3 09:21 queuedata.json
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc       100 Feb  7 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 22:04:23] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 21:59 run_atlas
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc       105 Feb  7 21:59 job.xml
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc      6594 Feb  7 21:59 init_data.xml
[2026-02-07 22:04:23] -rw-r--r--. 2 boinc boinc 492039586 Feb  7 21:59 EVNT.48317889._000213.pool.root.1
[2026-02-07 22:04:23] -rw-r--r--. 2 boinc boinc     15845 Feb  7 21:59 start_atlas.sh
[2026-02-07 22:04:23] drwxrwx--x. 2 boinc boinc      4096 Feb  7 21:59 shared
[2026-02-07 22:04:23] -rw-r--r--. 2 boinc boinc    597754 Feb  7 21:59 input.tar.gz
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc         0 Feb  7 21:59 boinc_lockfile
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc      2523 Feb  7 21:59 pandaJob.out
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc   1009510 Feb  7 21:59 agis_schedconf.cvmfs.json
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc   1513088 Feb  7 22:00 agis_ddmendpoints.agis.ALL.json
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc       444 Feb  7 22:00 workernode_map.json
[2026-02-07 22:04:23] drwx------. 5 boinc boinc      4096 Feb  7 22:00 pilot3
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc       965 Feb  7 22:01 memory_monitor_summary.json
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc     21003 Feb  7 22:01 log.48317892._011248.job.log.tgz.1
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc      7041 Feb  7 22:03 heartbeat.json
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc        95 Feb  7 22:04 pilot_heartbeat.json
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc       524 Feb  7 22:04 boinc_task_state.xml
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc      8192 Feb  7 22:04 boinc_mmap_file
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc        22 Feb  7 22:04 wrapper_checkpoint.txt
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc      4817 Feb  7 22:04 pilotlog.txt
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc     85227 Feb  7 22:04 log.48317892._011248.job.log.1
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc       188 Feb  7 22:04 output.list
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc       620 Feb  7 22:04 runtime_log
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc    122880 Feb  7 22:04 result.tar.gz
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc       643 Feb  7 22:04 WqbLDmoDZ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmiaVKDm3uGXln.diag
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc      8635 Feb  7 22:04 runtime_log.err
[2026-02-07 22:04:23] -rw-r--r--. 1 boinc boinc     21755 Feb  7 22:04 stderr.txt
[2026-02-07 22:04:23] No HITS result produced
[2026-02-07 22:04:23]  *** Contents of shared directory: ***
[2026-02-07 22:04:23] total 481232
[2026-02-07 22:04:23] -rw-r--r--. 2 boinc boinc 492039586 Feb  7 21:59 ATLAS.root_0
[2026-02-07 22:04:23] -rw-r--r--. 2 boinc boinc     15845 Feb  7 21:59 start_atlas.sh
[2026-02-07 22:04:23] -rw-r--r--. 2 boinc boinc    597754 Feb  7 21:59 input.tar.gz
[2026-02-07 22:04:23] -rw-------. 1 boinc boinc    122880 Feb  7 22:04 result.tar.gz
22:04:25 (85558): run_atlas exited; CPU time 20.958031
22:04:25 (85558): called boinc_finish(0)

</stderr_txt>
]]>

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