Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:18:58 (1876411): wrapper (7.7.26015): starting
04:18:58 (1876411): wrapper: running run_atlas (--nthreads 4)
[2026-02-09 04:18:58] Arguments: --nthreads 4
[2026-02-09 04:18:58] Threads: 4
[2026-02-09 04:18:58] Checking for CVMFS
[2026-02-09 04:18:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 04:18:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 04:18:59] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 04:18:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 04:18:59] 2.9.2.0 1089749 4202 98584 156042 1 49 24307171 36864000 0 130560 0 2079197 99.984 156689 9847 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 04:18:59] CVMFS is ok
[2026-02-09 04:18:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 04:18:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 04:18:59] Further information can be found at the LHC@home message board.
[2026-02-09 04:18:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 04:18:59] Checking for apptainer binary...
[2026-02-09 04:18:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 04:18:59] Running /usr/bin/apptainer --version
[2026-02-09 04:18:59] apptainer version 1.4.1-1.1
[2026-02-09 04:18:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 04:18:59] thA314
[2026-02-09 04:18:59] apptainer works
[2026-02-09 04:18:59] Set ATHENA_PROC_NUMBER=4
[2026-02-09 04:18:59] Set ATHENA_CORE_NUMBER=4
[2026-02-09 04:18:59] Starting ATLAS job with PandaID=7003989627
[2026-02-09 04:18:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 05:40:33]  *** The last 200 lines of the pilot log: ***
[2026-02-09 05:40:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-09 05:40:33]  is_altstaged=None
[2026-02-09 05:40:33]  is_tar=False
[2026-02-09 05:40:33]  lfn=log.48318042._013316.job.log.tgz.1
[2026-02-09 05:40:33]  mtime=0
[2026-02-09 05:40:33]  protocol_id=None
[2026-02-09 05:40:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-09 05:40:33]  replicas=None
[2026-02-09 05:40:33]  scope=mc23_13p6TeV
[2026-02-09 05:40:33]  status=None
[2026-02-09 05:40:33]  status_code=0
[2026-02-09 05:40:33]  storage_token=
[2026-02-09 05:40:33]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7003989627/log.48318042._013316.job.log.tgz.1
[2026-02-09 05:40:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/0a/log.48318042._013316.job.log.tgz.1
[2026-02-09 05:40:33]  workdir=None
[2026-02-09 05:40:33] ]
[2026-02-09 05:40:33] 2026-02-09 04:40:00,267 | INFO     | transferring file log.48318042._013316.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7003989627/log.48318042._013316.job.log.tgz.1 to /local/data/boinc/
[2026-02-09 05:40:33] 2026-02-09 04:40:00,267 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7003989627/log.48318042._013316.job.log.tgz.1 /local/data/boinc/slots/0/log.48318042._0133
[2026-02-09 05:40:33] 2026-02-09 04:40:00,286 | INFO     | adding to output.list: log.48318042._013316.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/0a/log.48318042._013316.job.log.tg
[2026-02-09 05:40:33] 2026-02-09 04:40:00,287 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-09 05:40:33] 2026-02-09 04:40:00,287 | INFO     | summary of transferred files:
[2026-02-09 05:40:33] 2026-02-09 04:40:00,287 | INFO     |  -- lfn=log.48318042._013316.job.log.tgz.1, status_code=0, status=transferred
[2026-02-09 05:40:33] 2026-02-09 04:40:00,287 | INFO     | stage-out finished correctly
[2026-02-09 05:40:33] 2026-02-09 04:40:00,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-09 05:40:33] 2026-02-09 04:40:00,391 | INFO     | time since job start (4848s) is within the limit (349056.0s)
[2026-02-09 05:40:33] 2026-02-09 04:40:01,279 | WARNING  | process 1885060 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 05:40:33] 2026-02-09 04:40:01,279 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7003989627/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 05:40:33] 2026-02-09 04:40:01,322 | INFO     | number of running child processes to parent process 1885060: 1
[2026-02-09 05:40:33] 2026-02-09 04:40:01,322 | INFO     | maximum number of monitored processes: 6
[2026-02-09 05:40:33] 2026-02-09 04:40:01,498 | INFO     | job 7003989627 has state=finished
[2026-02-09 05:40:33] 2026-02-09 04:40:01,498 | INFO     | preparing for final server update for job 7003989627 in state='finished'
[2026-02-09 05:40:33] 2026-02-09 04:40:02,073 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-09 05:40:33] 2026-02-09 04:40:02,073 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7003989627/jobReport.json
[2026-02-09 05:40:33] 2026-02-09 04:40:02,074 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-09 05:40:33] 2026-02-09 04:40:02,074 | INFO     | this job has now completed (state=finished)
[2026-02-09 05:40:33] 2026-02-09 04:40:02,074 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 05:40:33] 2026-02-09 04:40:02,074 | INFO     | log transfer has been attempted: DONE
[2026-02-09 05:40:33] 2026-02-09 04:40:02,075 | INFO     | job 7003989627 has finished - writing final server update
[2026-02-09 05:40:33] 2026-02-09 04:40:02,075 | INFO     | total number of processed events: 400 (read)
[2026-02-09 05:40:33] 2026-02-09 04:40:02,076 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7003989627/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 05:40:33] 2026-02-09 04:40:02,076 | INFO     | extracted standard info from prmon json
[2026-02-09 05:40:33] 2026-02-09 04:40:02,077 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 05:40:33] 2026-02-09 04:40:02,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 05:40:33] 2026-02-09 04:40:02,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 05:40:33] 2026-02-09 04:40:02,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 05:40:33] 2026-02-09 04:40:02,077 | INFO     | fitting pss+swap vs Time
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | sum of square deviations: 120605052.0
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | sum of deviations: -14325846706.000004
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | mean x: 1770609673.0
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | mean y: 2661364.5616438356
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | intersect: 210321237003.98672
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | chi2: 0.14321981697250613
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | current memory leak: -118.78 B/s (using 73 data points, chi2=0.14)
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | could have reported an average CPU frequency of 3373 MHz (6 samples)
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | ..............................
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | . Timing measurements:
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | . get job = 0 s
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | . initial setup = 4 s
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | . payload setup = 4 s
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | . stage-in = 0 s
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | . payload execution = 4828 s
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | . stage-out = 0 s
[2026-02-09 05:40:33] 2026-02-09 04:40:02,078 | INFO     | . log creation = 0 s
[2026-02-09 05:40:33] 2026-02-09 04:40:02,079 | INFO     | ..............................
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | 
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | job summary report
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | --------------------------------------------------
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | PanDA job id: 7003989627
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | task id: 48318042
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | errors: (none)
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | pilot state: finished 
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | transexitcode: 0
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | exeerrorcode: 0
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | exeerrordiag: 
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | exitcode: 0
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | exitmsg: OK
[2026-02-09 05:40:33] 2026-02-09 04:40:02,114 | INFO     | cpuconsumptiontime: 18263 s
[2026-02-09 05:40:33] 2026-02-09 04:40:02,115 | INFO     | nevents: 400
[2026-02-09 05:40:33] 2026-02-09 04:40:02,115 | INFO     | neventsw: 0
[2026-02-09 05:40:33] 2026-02-09 04:40:02,115 | INFO     | pid: 1885060
[2026-02-09 05:40:33] 2026-02-09 04:40:02,115 | INFO     | pgrp: 1885060
[2026-02-09 05:40:33] 2026-02-09 04:40:02,115 | INFO     | corecount: 4
[2026-02-09 05:40:33] 2026-02-09 04:40:02,115 | INFO     | event service: False
[2026-02-09 05:40:33] 2026-02-09 04:40:02,115 | INFO     | sizes: {0: 2282676, 1: 2283137, 11: 2283137, 4837: 2318470, 4839: 2318608}
[2026-02-09 05:40:33] 2026-02-09 04:40:02,115 | INFO     | --------------------------------------------------
[2026-02-09 05:40:33] 2026-02-09 04:40:02,115 | INFO     | 
[2026-02-09 05:40:33] 2026-02-09 04:40:02,115 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,135 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 05:40:33] 2026-02-09 04:40:02,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,135 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 05:40:33] 2026-02-09 04:40:02,135 | INFO     | job 7003989627 has completed (purged errors)
[2026-02-09 05:40:33] 2026-02-09 04:40:02,135 | INFO     | overall cleanup function is called
[2026-02-09 05:40:33] 2026-02-09 04:40:03,139 | INFO     | --- collectZombieJob: --- 10, [1885060]
[2026-02-09 05:40:33] 2026-02-09 04:40:03,139 | INFO     | zombie collector waiting for pid 1885060
[2026-02-09 05:40:33] 2026-02-09 04:40:03,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 05:40:33] 2026-02-09 04:40:03,139 | INFO     | collected zombie processes
[2026-02-09 05:40:33] 2026-02-09 04:40:03,139 | INFO     | will attempt to kill all subprocesses of pid=1885060
[2026-02-09 05:40:33] 2026-02-09 04:40:03,185 | INFO     | process IDs to be killed: [1885060] (in reverse order)
[2026-02-09 05:40:33] 2026-02-09 04:40:03,220 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 05:40:33] 2026-02-09 04:40:03,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 05:40:33] 2026-02-09 04:40:03,222 | INFO     | did not find any defunct processes belonging to 1885060
[2026-02-09 05:40:33] 2026-02-09 04:40:03,224 | INFO     | did not find any defunct processes belonging to 1885060
[2026-02-09 05:40:33] 2026-02-09 04:40:03,224 | INFO     | ready for new job
[2026-02-09 05:40:33] 2026-02-09 04:40:03,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 05:40:33] 2026-02-09 04:40:03,225 | INFO     | **************************************
[2026-02-09 05:40:33] 2026-02-09 04:40:03,225 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 05:40:33] 2026-02-09 04:40:03,225 | INFO     | **************************************
[2026-02-09 05:40:33] 2026-02-09 04:40:03,225 | INFO     | 
[2026-02-09 05:40:33] 2026-02-09 04:40:03,225 | INFO     | architecture information:
[2026-02-09 05:40:33] 2026-02-09 04:40:03,225 | INFO     | executing command: cat /etc/os-release
[2026-02-09 05:40:33] 2026-02-09 04:40:03,240 | INFO     | cat /etc/os-release:
[2026-02-09 05:40:33] NAME="CentOS Linux"
[2026-02-09 05:40:33] VERSION="7 (Core)"
[2026-02-09 05:40:33] ID="centos"
[2026-02-09 05:40:33] ID_LIKE="rhel fedora"
[2026-02-09 05:40:33] VERSION_ID="7"
[2026-02-09 05:40:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 05:40:33] ANSI_COLOR="0;31"
[2026-02-09 05:40:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 05:40:33] HOME_URL="https://www.centos.org/"
[2026-02-09 05:40:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 05:40:33] 
[2026-02-09 05:40:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 05:40:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 05:40:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 05:40:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 05:40:33] 
[2026-02-09 05:40:33] 2026-02-09 04:40:03,241 | INFO     | **************************************
[2026-02-09 05:40:33] 2026-02-09 04:40:03,743 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-09 05:40:33] 2026-02-09 04:40:03,760 | INFO     | sufficient remaining disk space (230477004800 B)
[2026-02-09 05:40:33] 2026-02-09 04:40:03,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 05:40:33] 2026-02-09 04:40:03,761 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 05:40:33] 2026-02-09 04:40:03,761 | INFO     | update_server=False
[2026-02-09 05:40:33] 2026-02-09 04:40:03,761 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 05:40:33] 2026-02-09 04:40:03,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 05:40:33] 2026-02-09 04:40:03,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 05:40:33] 2026-02-09 04:40:03,826 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-09 05:40:33] 2026-02-09 04:40:03,826 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-09 05:40:33] 2026-02-09 04:40:03,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 05:40:33] 2026-02-09 04:40:03,826 | INFO     | will abort loop
[2026-02-09 05:40:33] 2026-02-09 04:40:03,859 | INFO     | all data control threads have been joined
[2026-02-09 05:40:33] 2026-02-09 04:40:04,465 | INFO     | all job control threads have been joined
[2026-02-09 05:40:33] 2026-02-09 04:40:04,766 | INFO     | [job] retrieve thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:04,767 | INFO     | [job] queue monitor thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:04,832 | INFO     | [job] job monitor thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:04,865 | INFO     | [data] control thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:04,882 | INFO     | all payload control threads have been joined
[2026-02-09 05:40:33] 2026-02-09 04:40:05,404 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:05,461 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:05,471 | INFO     | [job] control thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:05,738 | INFO     | [payload] validate_post thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:05,767 | INFO     | [data] copytool_out thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:05,888 | INFO     | [payload] control thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:05,912 | INFO     | [job] validate thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:06,070 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:06,087 | INFO     | [payload] failed_post thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:06,124 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:06,268 | INFO     | [data] copytool_in thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:06,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 05:40:33] 2026-02-09 04:40:10,371 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 05:40:33] 2026-02-09 04:40:17,967 | INFO     | [monitor] cgroup control has ended
[2026-02-09 05:40:33] 2026-02-09 04:40:19,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216425531200)>', '<ExcThread(monitor, started 140215180064512)>']
[2026-02-09 05:40:33] 2026-02-09 04:40:24,942 | INFO     | all workflow threads have been joined
[2026-02-09 05:40:33] 2026-02-09 04:40:24,942 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 05:40:33] 2026-02-09 04:40:24,942 | INFO     | traces error code: 0
[2026-02-09 05:40:33] 2026-02-09 04:40:24,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 05:40:33] 2026-02-09 04:40:33,512 | INFO     | PID=1880531 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 05:40:33] 2026-02-09 04:40:33,512 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 05:40:33] 2026-02-09 04:40:33,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 05:40:33] 2026-02-09 04:40:33,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 05:40:33] 2026-02-09 04:40:33,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 05:40:33] 2026-02-09 04:40:33,512 | INFO     | [monitor] control thread has ended
[2026-02-09 05:40:33] 2026-02-09 04:40:33,589 [wrapper] ==== pilot stdout END ====
[2026-02-09 05:40:33] 2026-02-09 04:40:33,593 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 05:40:33] 2026-02-09 04:40:33,597 [wrapper] pilotpid: 1880531
[2026-02-09 05:40:33] 2026-02-09 04:40:33,601 [wrapper] Pilot exit status: 0
[2026-02-09 05:40:33] 2026-02-09 04:40:33,613 [wrapper] pandaids: 7003989627
[2026-02-09 05:40:33] 2026-02-09 04:40:33,636 [wrapper] cleanup supervisor_pilot 1890963 1880532
[2026-02-09 05:40:33] 2026-02-09 04:40:33,640 [wrapper] Test setup, not cleaning
[2026-02-09 05:40:33] 2026-02-09 04:40:33,644 [wrapper] apfmon messages muted
[2026-02-09 05:40:33] 2026-02-09 04:40:33,648 [wrapper] ==== wrapper stdout END ====
[2026-02-09 05:40:33] 2026-02-09 04:40:33,652 [wrapper] ==== wrapper stderr END ====
[2026-02-09 05:40:33]  *** Error codes and diagnostics ***
[2026-02-09 05:40:33]     "exeErrorCode": 0,
[2026-02-09 05:40:33]     "exeErrorDiag": "",
[2026-02-09 05:40:33]     "pilotErrorCode": 0,
[2026-02-09 05:40:33]     "pilotErrorDiag": "",
[2026-02-09 05:40:33]  *** Listing of results directory ***
[2026-02-09 05:40:33] total 676988
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc    584627 Feb  8 06:10 pilot3.tar.gz
[2026-02-09 05:40:33] -rwx------ 1 boinc boinc     36322 Feb  8 06:14 runpilot2-wrapper.sh
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc      5111 Feb  8 06:17 queuedata.json
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc       100 Feb  9 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 05:40:33] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 04:18 run_atlas
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc       105 Feb  9 04:18 job.xml
[2026-02-09 05:40:33] -rw-r--r-- 2 boinc boinc 500504001 Feb  9 04:18 EVNT.48318040._000253.pool.root.1
[2026-02-09 05:40:33] drwxrwx--x 2 boinc boinc      4096 Feb  9 04:18 shared
[2026-02-09 05:40:33] -rw-r--r-- 2 boinc boinc    597962 Feb  9 04:18 input.tar.gz
[2026-02-09 05:40:33] -rw-r--r-- 2 boinc boinc     15845 Feb  9 04:18 start_atlas.sh
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc         0 Feb  9 04:18 boinc_setup_complete
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc      6376 Feb  9 04:18 init_data.xml
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc         0 Feb  9 04:18 boinc_lockfile
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc      2538 Feb  9 04:18 pandaJob.out
[2026-02-09 05:40:33] -rw------- 1 boinc boinc   1009504 Feb  9 04:19 agis_schedconf.cvmfs.json
[2026-02-09 05:40:33] -rw------- 1 boinc boinc   1513088 Feb  9 04:19 agis_ddmendpoints.agis.ALL.json
[2026-02-09 05:40:33] -rw------- 1 boinc boinc       427 Feb  9 04:19 workernode_map.json
[2026-02-09 05:40:33] drwx------ 5 boinc boinc      4096 Feb  9 04:19 pilot3
[2026-02-09 05:40:33] -rw------- 1 boinc boinc        95 Feb  9 05:39 pilot_heartbeat.json
[2026-02-09 05:40:33] -rw------- 1 boinc boinc 186757683 Feb  9 05:39 HITS.48318042._013316.pool.root.1
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc       530 Feb  9 05:39 boinc_task_state.xml
[2026-02-09 05:40:33] -rw------- 1 boinc boinc      1018 Feb  9 05:39 memory_monitor_summary.json
[2026-02-09 05:40:33] -rw------- 1 boinc boinc    306978 Feb  9 05:40 log.48318042._013316.job.log.tgz.1
[2026-02-09 05:40:33] -rw------- 1 boinc boinc      6320 Feb  9 05:40 heartbeat.json
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc      8192 Feb  9 05:40 boinc_mmap_file
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc        27 Feb  9 05:40 wrapper_checkpoint.txt
[2026-02-09 05:40:33] -rw------- 1 boinc boinc       747 Feb  9 05:40 pilotlog.txt
[2026-02-09 05:40:33] -rw------- 1 boinc boinc    711771 Feb  9 05:40 log.48318042._013316.job.log.1
[2026-02-09 05:40:33] -rw------- 1 boinc boinc       357 Feb  9 05:40 output.list
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc       620 Feb  9 05:40 runtime_log
[2026-02-09 05:40:33] -rw------- 1 boinc boinc   1034240 Feb  9 05:40 result.tar.gz
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc      8896 Feb  9 05:40 runtime_log.err
[2026-02-09 05:40:33] -rw------- 1 boinc boinc       657 Feb  9 05:40 1ClMDmEJC98n9Rq4apOajLDm4fhM0noT9bVooX4SDmlacKDmVb8MEo.diag
[2026-02-09 05:40:33] -rw-r--r-- 1 boinc boinc     21450 Feb  9 05:40 stderr.txt
[2026-02-09 05:40:33] HITS file was successfully produced:
[2026-02-09 05:40:33] -rw------- 1 boinc boinc 186757683 Feb  9 05:39 shared/HITS.pool.root.1
[2026-02-09 05:40:33]  *** Contents of shared directory: ***
[2026-02-09 05:40:33] total 672780
[2026-02-09 05:40:33] -rw-r--r-- 2 boinc boinc 500504001 Feb  9 04:18 ATLAS.root_0
[2026-02-09 05:40:33] -rw-r--r-- 2 boinc boinc    597962 Feb  9 04:18 input.tar.gz
[2026-02-09 05:40:33] -rw-r--r-- 2 boinc boinc     15845 Feb  9 04:18 start_atlas.sh
[2026-02-09 05:40:33] -rw------- 1 boinc boinc 186757683 Feb  9 05:39 HITS.pool.root.1
[2026-02-09 05:40:33] -rw------- 1 boinc boinc   1034240 Feb  9 05:40 result.tar.gz
05:40:35 (1876411): run_atlas exited; CPU time 18287.194254
05:40:35 (1876411): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN