Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
00:59:47 (86838): wrapper (7.7.26015): starting
00:59:47 (86838): wrapper: running run_atlas (--nthreads 6)
[2026-02-09 00:59:47] Arguments: --nthreads 6
[2026-02-09 00:59:47] Threads: 6
[2026-02-09 00:59:47] Checking for CVMFS
[2026-02-09 00:59:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 00:59:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 00:59:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 00:59:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 00:59:48] 2.11.5.0 51193 12 45276 156037 3 188 2546807 4194305 1836 130560 0 87185 99.981 2880 1369 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2026-02-09 00:59:48] CVMFS is ok
[2026-02-09 00:59:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 00:59:48] Checking for apptainer binary...
[2026-02-09 00:59:48] apptainer is not installed, using version from CVMFS
[2026-02-09 00:59:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 00:59:49] boinc-b450f
[2026-02-09 00:59:49] apptainer works
[2026-02-09 00:59:49] Set ATHENA_PROC_NUMBER=6
[2026-02-09 00:59:49] Set ATHENA_CORE_NUMBER=6
[2026-02-09 00:59:49] Starting ATLAS job with PandaID=7000923394
[2026-02-09 00:59:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 02:10:16]  *** The last 200 lines of the pilot log: ***
[2026-02-09 02:10:16]  protocol_id=None
[2026-02-09 02:10:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-09 02:10:16]  replicas=None
[2026-02-09 02:10:16]  scope=mc23_13p6TeV
[2026-02-09 02:10:16]  status=None
[2026-02-09 02:10:16]  status_code=0
[2026-02-09 02:10:16]  storage_token=
[2026-02-09 02:10:16]  surl=/var/lib/boinc-client/slots/13/PanDA_Pilot-7000923394/log.48310749._007194.job.log.tgz.1
[2026-02-09 02:10:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/b0/log.48310749._007194.job.log.tgz.1
[2026-02-09 02:10:16]  workdir=None
[2026-02-09 02:10:16] ]
[2026-02-09 02:10:16] 2026-02-09 01:09:25,316 | INFO     | transferring file log.48310749._007194.job.log.tgz.1 from /var/lib/boinc-client/slots/13/PanDA_Pilot-7000923394/log.48310749._007194.job.log.tgz.1 to /var/lib/boin
[2026-02-09 02:10:16] 2026-02-09 01:09:25,316 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/13/PanDA_Pilot-7000923394/log.48310749._007194.job.log.tgz.1 /var/lib/boinc-client/slots/13/log.4831
[2026-02-09 02:10:16] 2026-02-09 01:09:25,325 | INFO     | adding to output.list: log.48310749._007194.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/b0/log.48310749._007194.job.log.tg
[2026-02-09 02:10:16] 2026-02-09 01:09:25,326 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-09 02:10:16] 2026-02-09 01:09:25,326 | INFO     | summary of transferred files:
[2026-02-09 02:10:16] 2026-02-09 01:09:25,326 | INFO     |  -- lfn=log.48310749._007194.job.log.tgz.1, status_code=0, status=transferred
[2026-02-09 02:10:16] 2026-02-09 01:09:25,326 | INFO     | stage-out finished correctly
[2026-02-09 02:10:16] 2026-02-09 01:09:26,555 | INFO     | time since job start (4163s) is within the limit (349056.0s)
[2026-02-09 02:10:16] 2026-02-09 01:09:27,596 | INFO     | monitor loop #321: job 0:7000923394 is in state 'finished'
[2026-02-09 02:10:16] 2026-02-09 01:09:27,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-09 02:10:16] 2026-02-09 01:09:28,560 | INFO     | time since job start (4165s) is within the limit (349056.0s)
[2026-02-09 02:10:16] 2026-02-09 01:09:28,785 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-09 02:10:16] 2026-02-09 01:09:29,722 | INFO     | job 7000923394 has state=finished
[2026-02-09 02:10:16] 2026-02-09 01:09:29,723 | INFO     | preparing for final server update for job 7000923394 in state='finished'
[2026-02-09 02:10:16] 2026-02-09 01:09:30,099 | INFO     | monitor loop #322: job 0:7000923394 is in state 'finished'
[2026-02-09 02:10:16] 2026-02-09 01:09:30,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,389 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,389 | INFO     | reading metadata from: /var/lib/boinc-client/slots/13/PanDA_Pilot-7000923394/jobReport.json
[2026-02-09 02:10:16] 2026-02-09 01:09:30,390 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/13/workernode_map.json
[2026-02-09 02:10:16] 2026-02-09 01:09:30,390 | INFO     | this job has now completed (state=finished)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,391 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,391 | INFO     | log transfer has been attempted: DONE
[2026-02-09 02:10:16] 2026-02-09 01:09:30,391 | INFO     | job 7000923394 has finished - writing final server update
[2026-02-09 02:10:16] 2026-02-09 01:09:30,391 | INFO     | total number of processed events: 400 (read)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,393 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-7000923394/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,394 | INFO     | extracted standard info from prmon json
[2026-02-09 02:10:16] 2026-02-09 01:09:30,394 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 02:10:16] 2026-02-09 01:09:30,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 02:10:16] 2026-02-09 01:09:30,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 02:10:16] 2026-02-09 01:09:30,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 02:10:16] 2026-02-09 01:09:30,395 | INFO     | fitting pss+swap vs Time
[2026-02-09 02:10:16] 2026-02-09 01:09:30,395 | INFO     | sum of square deviations: 70364110.0
[2026-02-09 02:10:16] 2026-02-09 01:09:30,395 | INFO     | sum of deviations: -1593094300.0
[2026-02-09 02:10:16] 2026-02-09 01:09:30,395 | INFO     | mean x: 1770597355.0
[2026-02-09 02:10:16] 2026-02-09 01:09:30,395 | INFO     | mean y: 2440228.655737705
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | intersect: 40090043892.59147
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | chi2: 0.012170479832975988
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | current memory leak: -22.64 B/s (using 61 data points, chi2=0.01)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | could have reported an average CPU frequency of 3845 MHz (6 samples)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | ..............................
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | . Timing measurements:
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | . get job = 0 s
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | . initial setup = 4 s
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | . payload setup = 2 s
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | . stage-in = 0 s
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | . payload execution = 4143 s
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | . stage-out = 0 s
[2026-02-09 02:10:16] 2026-02-09 01:09:30,396 | INFO     | . log creation = 0 s
[2026-02-09 02:10:16] 2026-02-09 01:09:30,397 | INFO     | ..............................
[2026-02-09 02:10:16] 2026-02-09 01:09:30,565 | INFO     | time since job start (4167s) is within the limit (349056.0s)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | 
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | job summary report
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | --------------------------------------------------
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | PanDA job id: 7000923394
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | task id: 48310749
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | errors: (none)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | pilot state: finished 
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | transexitcode: 0
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | exeerrorcode: 0
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | exeerrordiag: 
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | exitcode: 0
[2026-02-09 02:10:16] 2026-02-09 01:09:30,734 | INFO     | exitmsg: OK
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | cpuconsumptiontime: 23671 s
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | nevents: 400
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | neventsw: 0
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | pid: 96615
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | pgrp: 96615
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | corecount: 6
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | event service: False
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | sizes: {0: 2282615, 1: 2283076, 11: 2283076, 4150: 2309150, 4151: 2318164, 4154: 2318220, 4156: 2318542}
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | --------------------------------------------------
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | 
[2026-02-09 02:10:16] 2026-02-09 01:09:30,735 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2026-02-09 02:10:16] 2026-02-09 01:09:30,743 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,743 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,743 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,743 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,743 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,744 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 02:10:16] 2026-02-09 01:09:30,745 | INFO     | job 7000923394 has completed (purged errors)
[2026-02-09 02:10:16] 2026-02-09 01:09:30,745 | INFO     | overall cleanup function is called
[2026-02-09 02:10:16] 2026-02-09 01:09:31,672 | INFO     | PID=91991 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-09 02:10:16] 2026-02-09 01:09:31,672 | INFO     | .. there are 3 such processes running
[2026-02-09 02:10:16] 2026-02-09 01:09:31,751 | INFO     | --- collectZombieJob: --- 10, [96615]
[2026-02-09 02:10:16] 2026-02-09 01:09:31,751 | INFO     | zombie collector waiting for pid 96615
[2026-02-09 02:10:16] 2026-02-09 01:09:31,751 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 02:10:16] 2026-02-09 01:09:31,751 | INFO     | collected zombie processes
[2026-02-09 02:10:16] 2026-02-09 01:09:31,751 | INFO     | will attempt to kill all subprocesses of pid=96615
[2026-02-09 02:10:16] 2026-02-09 01:09:31,836 | INFO     | process IDs to be killed: [96615] (in reverse order)
[2026-02-09 02:10:16] 2026-02-09 01:09:31,864 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 02:10:16] 2026-02-09 01:09:31,865 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 02:10:16] 2026-02-09 01:09:31,867 | INFO     | did not find any defunct processes belonging to 96615
[2026-02-09 02:10:16] 2026-02-09 01:09:31,869 | INFO     | did not find any defunct processes belonging to 96615
[2026-02-09 02:10:16] 2026-02-09 01:09:31,869 | INFO     | ready for new job
[2026-02-09 02:10:16] 2026-02-09 01:09:31,869 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 02:10:16] 2026-02-09 01:09:31,869 | INFO     | **************************************
[2026-02-09 02:10:16] 2026-02-09 01:09:31,870 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 02:10:16] 2026-02-09 01:09:31,870 | INFO     | **************************************
[2026-02-09 02:10:16] 2026-02-09 01:09:31,870 | INFO     | 
[2026-02-09 02:10:16] 2026-02-09 01:09:31,870 | INFO     | architecture information:
[2026-02-09 02:10:16] 2026-02-09 01:09:31,871 | INFO     | executing command: cat /etc/os-release
[2026-02-09 02:10:16] 2026-02-09 01:09:31,877 | INFO     | cat /etc/os-release:
[2026-02-09 02:10:16] NAME="CentOS Linux"
[2026-02-09 02:10:16] VERSION="7 (Core)"
[2026-02-09 02:10:16] ID="centos"
[2026-02-09 02:10:16] ID_LIKE="rhel fedora"
[2026-02-09 02:10:16] VERSION_ID="7"
[2026-02-09 02:10:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 02:10:16] ANSI_COLOR="0;31"
[2026-02-09 02:10:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 02:10:16] HOME_URL="https://www.centos.org/"
[2026-02-09 02:10:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 02:10:16] 
[2026-02-09 02:10:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 02:10:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 02:10:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 02:10:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 02:10:16] 
[2026-02-09 02:10:16] 2026-02-09 01:09:31,878 | INFO     | **************************************
[2026-02-09 02:10:16] 2026-02-09 01:09:32,380 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2026-02-09 02:10:16] 2026-02-09 01:09:32,388 | INFO     | sufficient remaining disk space (16710107136 B)
[2026-02-09 02:10:16] 2026-02-09 01:09:32,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 02:10:16] 2026-02-09 01:09:32,388 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 02:10:16] 2026-02-09 01:09:32,389 | INFO     | update_server=False
[2026-02-09 02:10:16] 2026-02-09 01:09:32,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 02:10:16] 2026-02-09 01:09:32,389 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-09 02:10:16] 2026-02-09 01:09:32,389 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 02:10:16] 2026-02-09 01:09:32,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 02:10:16] 2026-02-09 01:09:32,389 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 02:10:16] 2026-02-09 01:09:32,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 02:10:16] 2026-02-09 01:09:32,604 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-09 02:10:16] 2026-02-09 01:09:32,604 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-09 02:10:16] 2026-02-09 01:09:32,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 02:10:16] 2026-02-09 01:09:32,604 | INFO     | will abort loop
[2026-02-09 02:10:16] 2026-02-09 01:09:32,840 | INFO     | all job control threads have been joined
[2026-02-09 02:10:16] 2026-02-09 01:09:33,267 | INFO     | all data control threads have been joined
[2026-02-09 02:10:16] 2026-02-09 01:09:33,394 | INFO     | [job] retrieve thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:33,394 | INFO     | [job] queue monitor thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:33,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 02:10:16] 2026-02-09 01:09:33,606 | INFO     | [job] job monitor thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:33,644 | INFO     | [payload] validate_post thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:33,834 | INFO     | all payload control threads have been joined
[2026-02-09 02:10:16] 2026-02-09 01:09:33,844 | INFO     | [job] control thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:34,273 | INFO     | [data] control thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:34,596 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:34,674 | INFO     | [payload] failed_post thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:34,685 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:34,744 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:34,745 | INFO     | [job] validate thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:34,747 | INFO     | [data] copytool_in thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:34,837 | INFO     | [payload] control thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:34,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 02:10:16] 2026-02-09 01:09:35,405 | INFO     | [data] copytool_out thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:38,854 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:09:42,870 | INFO     | job.realtimelogging is not enabled
[2026-02-09 02:10:16] 2026-02-09 01:09:43,874 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 02:10:16] 2026-02-09 01:10:10,144 | INFO     | [monitor] cgroup control has ended
[2026-02-09 02:10:16] 2026-02-09 01:10:11,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140162693166912)>', '<ExcThread(monitor, started 140162004666112)>']
[2026-02-09 02:10:16] 2026-02-09 01:10:12,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 02:10:16] 2026-02-09 01:10:12,555 | INFO     | [monitor] control thread has ended
[2026-02-09 02:10:16] 2026-02-09 01:10:16,644 | INFO     | all workflow threads have been joined
[2026-02-09 02:10:16] 2026-02-09 01:10:16,645 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 02:10:16] 2026-02-09 01:10:16,645 | INFO     | traces error code: 0
[2026-02-09 02:10:16] 2026-02-09 01:10:16,645 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 02:10:16] 2026-02-09 01:10:16,714 [wrapper] ==== pilot stdout END ====
[2026-02-09 02:10:16] 2026-02-09 01:10:16,715 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 02:10:16] 2026-02-09 01:10:16,716 [wrapper] pilotpid: 91991
[2026-02-09 02:10:16] 2026-02-09 01:10:16,717 [wrapper] Pilot exit status: 0
[2026-02-09 02:10:16] 2026-02-09 01:10:16,726 [wrapper] pandaids: 7000923394
[2026-02-09 02:10:16] 2026-02-09 01:10:16,742 [wrapper] cleanup supervisor_pilot  118810 91992
[2026-02-09 02:10:16] 2026-02-09 01:10:16,743 [wrapper] Test setup, not cleaning
[2026-02-09 02:10:16] 2026-02-09 01:10:16,745 [wrapper] apfmon messages muted
[2026-02-09 02:10:16] 2026-02-09 01:10:16,746 [wrapper] ==== wrapper stdout END ====
[2026-02-09 02:10:16] 2026-02-09 01:10:16,747 [wrapper] ==== wrapper stderr END ====
[2026-02-09 02:10:16]  *** Error codes and diagnostics ***
[2026-02-09 02:10:16]     "exeErrorCode": 0,
[2026-02-09 02:10:16]     "exeErrorDiag": "",
[2026-02-09 02:10:16]     "pilotErrorCode": 0,
[2026-02-09 02:10:16]     "pilotErrorDiag": "",
[2026-02-09 02:10:16]  *** Listing of results directory ***
[2026-02-09 02:10:16] total 669265
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc    584627 Feb  7 23:56 pilot3.tar.gz
[2026-02-09 02:10:16] -rwx------ 1 boinc boinc     36322 Feb  7 23:59 runpilot2-wrapper.sh
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc      5111 Feb  8 00:00 queuedata.json
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc       100 Feb  9 00:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 02:10:16] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 00:59 run_atlas
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc       105 Feb  9 00:59 job.xml
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc      6796 Feb  9 00:59 init_data.xml
[2026-02-09 02:10:16] -rw-r--r-- 2 boinc boinc 503934882 Feb  9 00:59 EVNT.48310747._000135.pool.root.1
[2026-02-09 02:10:16] -rw-r--r-- 2 boinc boinc     15845 Feb  9 00:59 start_atlas.sh
[2026-02-09 02:10:16] drwxrwx--x 2 boinc boinc         5 Feb  9 00:59 shared
[2026-02-09 02:10:16] -rw-r--r-- 2 boinc boinc    597949 Feb  9 00:59 input.tar.gz
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc         0 Feb  9 00:59 boinc_lockfile
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc      2524 Feb  9 00:59 pandaJob.out
[2026-02-09 02:10:16] -rw------- 1 boinc boinc        56 Feb  9 00:59 setup.sh.local
[2026-02-09 02:10:16] -rw------- 1 boinc boinc   1009496 Feb  9 00:59 agis_schedconf.cvmfs.json
[2026-02-09 02:10:16] -rw------- 1 boinc boinc   1513088 Feb  9 01:00 agis_ddmendpoints.agis.ALL.json
[2026-02-09 02:10:16] -rw------- 1 boinc boinc       424 Feb  9 01:00 workernode_map.json
[2026-02-09 02:10:16] drwx------ 5 boinc boinc        22 Feb  9 01:00 pilot3
[2026-02-09 02:10:16] -rw------- 1 boinc boinc        95 Feb  9 02:08 pilot_heartbeat.json
[2026-02-09 02:10:16] -rw------- 1 boinc boinc 179245067 Feb  9 02:08 HITS.48310749._007194.pool.root.1
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc       530 Feb  9 02:09 boinc_task_state.xml
[2026-02-09 02:10:16] -rw------- 1 boinc boinc      1024 Feb  9 02:09 memory_monitor_summary.json
[2026-02-09 02:10:16] -rw------- 1 boinc boinc    327944 Feb  9 02:09 log.48310749._007194.job.log.tgz.1
[2026-02-09 02:10:16] -rw------- 1 boinc boinc      6298 Feb  9 02:09 heartbeat.json
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc      8192 Feb  9 02:10 boinc_mmap_file
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc        27 Feb  9 02:10 wrapper_checkpoint.txt
[2026-02-09 02:10:16] -rw------- 1 boinc boinc      4814 Feb  9 02:10 pilotlog.txt
[2026-02-09 02:10:16] -rw------- 1 boinc boinc    634094 Feb  9 02:10 log.48310749._007194.job.log.1
[2026-02-09 02:10:16] -rw------- 1 boinc boinc       357 Feb  9 02:10 output.list
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc      9481 Feb  9 02:10 runtime_log.err
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc       620 Feb  9 02:10 runtime_log
[2026-02-09 02:10:16] -rw------- 1 boinc boinc    983040 Feb  9 02:10 result.tar.gz
[2026-02-09 02:10:16] -rw------- 1 boinc boinc       659 Feb  9 02:10 cHnLDmbS688n9Rq4apOajLDm4fhM0noT9bVooX4SDmFxbKDmAhQbpn.diag
[2026-02-09 02:10:16] -rw-r--r-- 1 boinc boinc     21527 Feb  9 02:10 stderr.txt
[2026-02-09 02:10:16] HITS file was successfully produced:
[2026-02-09 02:10:16] -rw------- 1 boinc boinc 179245067 Feb  9 02:08 shared/HITS.pool.root.1
[2026-02-09 02:10:16]  *** Contents of shared directory: ***
[2026-02-09 02:10:16] total 668177
[2026-02-09 02:10:16] -rw-r--r-- 2 boinc boinc 503934882 Feb  9 00:59 ATLAS.root_0
[2026-02-09 02:10:16] -rw-r--r-- 2 boinc boinc     15845 Feb  9 00:59 start_atlas.sh
[2026-02-09 02:10:16] -rw-r--r-- 2 boinc boinc    597949 Feb  9 00:59 input.tar.gz
[2026-02-09 02:10:16] -rw------- 1 boinc boinc 179245067 Feb  9 02:08 HITS.pool.root.1
[2026-02-09 02:10:16] -rw------- 1 boinc boinc    983040 Feb  9 02:10 result.tar.gz
02:10:18 (86838): run_atlas exited; CPU time 23725.807948
02:10:18 (86838): called boinc_finish(0)

</stderr_txt>
]]>

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