Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:11:49 (376282): wrapper (7.7.26015): starting
13:11:49 (376282): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 13:11:49] Arguments: --nthreads 12
[2026-02-08 13:11:49] Threads: 12
[2026-02-08 13:11:49] Checking for CVMFS
[2026-02-08 13:11:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 13:11:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 13:11:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 13:11:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 13:11:49] 2.13.3.0 4554 1308 60340 156018 1 50 3911446 4097025 922 130560 0 967977 99.991 45000 22058 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-02-08 13:11:49] CVMFS is ok
[2026-02-08 13:11:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 13:11:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 13:11:49] Further information can be found at the LHC@home message board.
[2026-02-08 13:11:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 13:11:49] Checking for apptainer binary...
[2026-02-08 13:11:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 13:11:49] Running /usr/bin/apptainer --version
[2026-02-08 13:11:49] apptainer version 1.4.5-2.el9
[2026-02-08 13:11:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 13:11:50] pckelar7.cern.ch
[2026-02-08 13:11:50] apptainer works
[2026-02-08 13:11:50] Set ATHENA_PROC_NUMBER=12
[2026-02-08 13:11:50] Set ATHENA_CORE_NUMBER=12
[2026-02-08 13:11:50] Starting ATLAS job with PandaID=6994939166
[2026-02-08 13:11:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 15:04:20]  *** The last 200 lines of the pilot log: ***
[2026-02-08 15:04:20] 2026-02-08 14:03:22,411 | INFO     | total number of processed events: 400 (read)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,417 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6994939166/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,418 | INFO     | extracted standard info from prmon json
[2026-02-08 15:04:20] 2026-02-08 14:03:22,418 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 15:04:20] 2026-02-08 14:03:22,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 15:04:20] 2026-02-08 14:03:22,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 15:04:20] 2026-02-08 14:03:22,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 15:04:20] 2026-02-08 14:03:22,423 | INFO     | fitting pss+swap vs Time
[2026-02-08 15:04:20] 2026-02-08 14:03:22,423 | INFO     | sum of square deviations: 412686807.5
[2026-02-08 15:04:20] 2026-02-08 14:03:22,424 | INFO     | sum of deviations: 3622131962.500001
[2026-02-08 15:04:20] 2026-02-08 14:03:22,424 | INFO     | mean x: 1770556068.5
[2026-02-08 15:04:20] 2026-02-08 14:03:22,424 | INFO     | mean y: 2660934.227272727
[2026-02-08 15:04:20] 2026-02-08 14:03:22,425 | INFO     | intersect: -15537423242.348183
[2026-02-08 15:04:20] 2026-02-08 14:03:22,425 | INFO     | chi2: 1.8299966034667294
[2026-02-08 15:04:20] 2026-02-08 14:03:22,425 | INFO     | sum of square deviations: 358927660.0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,426 | INFO     | sum of deviations: 10732668911.999998
[2026-02-08 15:04:20] 2026-02-08 14:03:22,426 | INFO     | mean x: 1770555916.0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,427 | INFO     | mean y: 2680326.8476190474
[2026-02-08 15:04:20] 2026-02-08 14:03:22,427 | INFO     | intersect: -52940551845.927475
[2026-02-08 15:04:20] 2026-02-08 14:03:22,427 | INFO     | chi2: 1.1280928527078173
[2026-02-08 15:04:20] 2026-02-08 14:03:22,427 | INFO     | current chi2=1.1280928527078173 (change=38.35546740519801 %)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,428 | INFO     | sum of square deviations: 310052325.0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,428 | INFO     | sum of deviations: 10239241101.499996
[2026-02-08 15:04:20] 2026-02-08 14:03:22,429 | INFO     | mean x: 1770555763.5
[2026-02-08 15:04:20] 2026-02-08 14:03:22,429 | INFO     | mean y: 2678786.03
[2026-02-08 15:04:20] 2026-02-08 14:03:22,429 | INFO     | intersect: -58468572304.01394
[2026-02-08 15:04:20] 2026-02-08 14:03:22,429 | INFO     | chi2: 1.130105115566682
[2026-02-08 15:04:20] 2026-02-08 14:03:22,429 | INFO     | current chi2=1.130105115566682 (change=-0.17837741406077015 %)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,430 | INFO     | right removable region: 99
[2026-02-08 15:04:20] 2026-02-08 14:03:22,430 | INFO     | sum of square deviations: 358927660.0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,431 | INFO     | sum of deviations: -7878295302.0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,431 | INFO     | mean x: 1770556221.0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,431 | INFO     | mean y: 2692488.180952381
[2026-02-08 15:04:20] 2026-02-08 14:03:22,431 | INFO     | intersect: 38865578557.84517
[2026-02-08 15:04:20] 2026-02-08 14:03:22,431 | INFO     | chi2: 0.7425979333734921
[2026-02-08 15:04:20] 2026-02-08 14:03:22,432 | INFO     | current chi2=0.7425979333734921 (change=59.420802641561124 %)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,432 | INFO     | sum of square deviations: 310052325.0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,433 | INFO     | sum of deviations: -5931169629.0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,433 | INFO     | mean x: 1770556373.5
[2026-02-08 15:04:20] 2026-02-08 14:03:22,433 | INFO     | mean y: 2686465.52
[2026-02-08 15:04:20] 2026-02-08 14:03:22,433 | INFO     | intersect: 33872679825.303967
[2026-02-08 15:04:20] 2026-02-08 14:03:22,434 | INFO     | chi2: 0.7338275154470733
[2026-02-08 15:04:20] 2026-02-08 14:03:22,434 | INFO     | current chi2=0.7338275154470733 (change=1.181045291437372 %)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,434 | INFO     | left removable region: 20
[2026-02-08 15:04:20] 2026-02-08 14:03:22,434 | INFO     | sum of square deviations: 152858680.0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,435 | INFO     | sum of deviations: -124153788.00000003
[2026-02-08 15:04:20] 2026-02-08 14:03:22,435 | INFO     | mean x: 1770556343.0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,435 | INFO     | mean y: 2713932.2784810127
[2026-02-08 15:04:20] 2026-02-08 14:03:22,435 | INFO     | intersect: 1440782590.5377133
[2026-02-08 15:04:20] 2026-02-08 14:03:22,436 | INFO     | chi2: 0.0006432101917469185
[2026-02-08 15:04:20] 2026-02-08 14:03:22,436 | INFO     | current memory leak: -0.81 B/s (using 79 data points, chi2=0.00)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,436 | INFO     | could have reported an average CPU frequency of 2832 MHz (7 samples)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,437 | INFO     | ..............................
[2026-02-08 15:04:20] 2026-02-08 14:03:22,437 | INFO     | . Timing measurements:
[2026-02-08 15:04:20] 2026-02-08 14:03:22,437 | INFO     | . get job = 0 s
[2026-02-08 15:04:20] 2026-02-08 14:03:22,437 | INFO     | . initial setup = 4 s
[2026-02-08 15:04:20] 2026-02-08 14:03:22,437 | INFO     | . payload setup = 6 s
[2026-02-08 15:04:20] 2026-02-08 14:03:22,437 | INFO     | . stage-in = 0 s
[2026-02-08 15:04:20] 2026-02-08 14:03:22,438 | INFO     | . payload execution = 6656 s
[2026-02-08 15:04:20] 2026-02-08 14:03:22,438 | INFO     | . stage-out = 0 s
[2026-02-08 15:04:20] 2026-02-08 14:03:22,438 | INFO     | . log creation = 0 s
[2026-02-08 15:04:20] 2026-02-08 14:03:22,438 | INFO     | ..............................
[2026-02-08 15:04:20] 2026-02-08 14:03:22,592 | INFO     | 
[2026-02-08 15:04:20] 2026-02-08 14:03:22,592 | INFO     | job summary report
[2026-02-08 15:04:20] 2026-02-08 14:03:22,592 | INFO     | --------------------------------------------------
[2026-02-08 15:04:20] 2026-02-08 14:03:22,593 | INFO     | PanDA job id: 6994939166
[2026-02-08 15:04:20] 2026-02-08 14:03:22,593 | INFO     | task id: 48317931
[2026-02-08 15:04:20] 2026-02-08 14:03:22,593 | INFO     | errors: (none)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,593 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 15:04:20] 2026-02-08 14:03:22,593 | INFO     | pilot state: finished 
[2026-02-08 15:04:20] 2026-02-08 14:03:22,593 | INFO     | transexitcode: 0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,594 | INFO     | exeerrorcode: 0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,594 | INFO     | exeerrordiag: 
[2026-02-08 15:04:20] 2026-02-08 14:03:22,594 | INFO     | exitcode: 0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,594 | INFO     | exitmsg: OK
[2026-02-08 15:04:20] 2026-02-08 14:03:22,594 | INFO     | cpuconsumptiontime: 75403 s
[2026-02-08 15:04:20] 2026-02-08 14:03:22,594 | INFO     | nevents: 400
[2026-02-08 15:04:20] 2026-02-08 14:03:22,595 | INFO     | neventsw: 0
[2026-02-08 15:04:20] 2026-02-08 14:03:22,595 | INFO     | pid: 385803
[2026-02-08 15:04:20] 2026-02-08 14:03:22,595 | INFO     | pgrp: 385803
[2026-02-08 15:04:20] 2026-02-08 14:03:22,595 | INFO     | corecount: 12
[2026-02-08 15:04:20] 2026-02-08 14:03:22,595 | INFO     | event service: False
[2026-02-08 15:04:20] 2026-02-08 14:03:22,595 | INFO     | sizes: {0: 2282538, 1: 2283055, 12: 2283055, 6666: 2310210, 6667: 2319208, 6668: 2319586}
[2026-02-08 15:04:20] 2026-02-08 14:03:22,596 | INFO     | --------------------------------------------------
[2026-02-08 15:04:20] 2026-02-08 14:03:22,596 | INFO     | 
[2026-02-08 15:04:20] 2026-02-08 14:03:22,596 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-02-08 15:04:20] 2026-02-08 14:03:22,615 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,615 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,616 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,616 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,617 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,617 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,617 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,617 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,617 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,618 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,618 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 15:04:20] 2026-02-08 14:03:22,619 | INFO     | job 6994939166 has completed (purged errors)
[2026-02-08 15:04:20] 2026-02-08 14:03:22,619 | INFO     | overall cleanup function is called
[2026-02-08 15:04:20] 2026-02-08 14:03:23,628 | INFO     | --- collectZombieJob: --- 10, [385803]
[2026-02-08 15:04:20] 2026-02-08 14:03:23,628 | INFO     | zombie collector waiting for pid 385803
[2026-02-08 15:04:20] 2026-02-08 14:03:23,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 15:04:20] 2026-02-08 14:03:23,629 | INFO     | collected zombie processes
[2026-02-08 15:04:20] 2026-02-08 14:03:23,629 | INFO     | will attempt to kill all subprocesses of pid=385803
[2026-02-08 15:04:20] 2026-02-08 14:03:23,803 | INFO     | process IDs to be killed: [385803] (in reverse order)
[2026-02-08 15:04:20] 2026-02-08 14:03:23,857 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 15:04:20] 2026-02-08 14:03:23,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 15:04:20] 2026-02-08 14:03:23,865 | INFO     | did not find any defunct processes belonging to 385803
[2026-02-08 15:04:20] 2026-02-08 14:03:23,870 | INFO     | did not find any defunct processes belonging to 385803
[2026-02-08 15:04:20] 2026-02-08 14:03:23,871 | INFO     | ready for new job
[2026-02-08 15:04:20] 2026-02-08 14:03:23,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 15:04:20] 2026-02-08 14:03:23,873 | INFO     | **************************************
[2026-02-08 15:04:20] 2026-02-08 14:03:23,873 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-08 15:04:20] 2026-02-08 14:03:23,874 | INFO     | **************************************
[2026-02-08 15:04:20] 2026-02-08 14:03:23,874 | INFO     | 
[2026-02-08 15:04:20] 2026-02-08 14:03:23,875 | INFO     | architecture information:
[2026-02-08 15:04:20] 2026-02-08 14:03:23,875 | INFO     | executing command: cat /etc/os-release
[2026-02-08 15:04:20] 2026-02-08 14:03:23,890 | INFO     | cat /etc/os-release:
[2026-02-08 15:04:20] NAME="CentOS Linux"
[2026-02-08 15:04:20] VERSION="7 (Core)"
[2026-02-08 15:04:20] ID="centos"
[2026-02-08 15:04:20] ID_LIKE="rhel fedora"
[2026-02-08 15:04:20] VERSION_ID="7"
[2026-02-08 15:04:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 15:04:20] ANSI_COLOR="0;31"
[2026-02-08 15:04:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 15:04:20] HOME_URL="https://www.centos.org/"
[2026-02-08 15:04:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 15:04:20] 
[2026-02-08 15:04:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 15:04:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 15:04:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 15:04:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 15:04:20] 
[2026-02-08 15:04:20] 2026-02-08 14:03:23,891 | INFO     | **************************************
[2026-02-08 15:04:20] 2026-02-08 14:03:24,394 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-02-08 15:04:20] 2026-02-08 14:03:24,408 | INFO     | sufficient remaining disk space (1784059789312 B)
[2026-02-08 15:04:20] 2026-02-08 14:03:24,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 15:04:20] 2026-02-08 14:03:24,409 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 15:04:20] 2026-02-08 14:03:24,409 | INFO     | update_server=False
[2026-02-08 15:04:20] 2026-02-08 14:03:24,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 15:04:20] 2026-02-08 14:03:24,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 15:04:20] 2026-02-08 14:03:24,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 15:04:20] 2026-02-08 14:03:24,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 15:04:20] 2026-02-08 14:03:24,703 | INFO     | all data control threads have been joined
[2026-02-08 15:04:20] 2026-02-08 14:03:24,809 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 15:04:20] 2026-02-08 14:03:24,809 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 15:04:20] 2026-02-08 14:03:24,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 15:04:20] 2026-02-08 14:03:24,809 | INFO     | will abort loop
[2026-02-08 15:04:20] 2026-02-08 14:03:25,047 | INFO     | all job control threads have been joined
[2026-02-08 15:04:20] 2026-02-08 14:03:25,414 | INFO     | [job] retrieve thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:25,416 | INFO     | [job] queue monitor thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:25,708 | INFO     | [data] control thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:25,784 | INFO     | all payload control threads have been joined
[2026-02-08 15:04:20] 2026-02-08 14:03:25,815 | INFO     | [job] job monitor thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:25,878 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:25,878 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:26,008 | INFO     | [payload] failed_post thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:26,053 | INFO     | [job] control thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:26,212 | INFO     | [job] validate thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:26,301 | INFO     | [payload] validate_post thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:26,415 | INFO     | [data] copytool_out thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:26,620 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:26,725 | INFO     | [data] copytool_in thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:26,789 | INFO     | [payload] control thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:28,416 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:35,011 | INFO     | job.realtimelogging is not enabled
[2026-02-08 15:04:20] 2026-02-08 14:03:36,016 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 15:04:20] 2026-02-08 14:03:55,216 | INFO     | PID=380444 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-08 15:04:20] 2026-02-08 14:03:55,216 | INFO     | .. there are 2 such processes running
[2026-02-08 15:04:20] 2026-02-08 14:03:55,216 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 15:04:20] 2026-02-08 14:03:55,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 15:04:20] 2026-02-08 14:03:55,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 15:04:20] 2026-02-08 14:04:13,394 | INFO     | [monitor] cgroup control has ended
[2026-02-08 15:04:20] 2026-02-08 14:04:15,074 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336323327808)>', '<ExcThread(monitor, started 140335942448896)>']
[2026-02-08 15:04:20] 2026-02-08 14:04:15,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 15:04:20] 2026-02-08 14:04:15,318 | INFO     | [monitor] control thread has ended
[2026-02-08 15:04:20] 2026-02-08 14:04:20,100 | INFO     | all workflow threads have been joined
[2026-02-08 15:04:20] 2026-02-08 14:04:20,100 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 15:04:20] 2026-02-08 14:04:20,101 | INFO     | traces error code: 0
[2026-02-08 15:04:20] 2026-02-08 14:04:20,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 15:04:20] 2026-02-08 14:04:20,220 [wrapper] ==== pilot stdout END ====
[2026-02-08 15:04:20] 2026-02-08 14:04:20,223 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 15:04:20] 2026-02-08 14:04:20,226 [wrapper] pilotpid: 380444
[2026-02-08 15:04:20] 2026-02-08 14:04:20,229 [wrapper] Pilot exit status: 0
[2026-02-08 15:04:20] 2026-02-08 14:04:20,239 [wrapper] pandaids: 6994939166
[2026-02-08 15:04:20] 2026-02-08 14:04:20,278 [wrapper] cleanup supervisor_pilot  412792 380445
[2026-02-08 15:04:20] 2026-02-08 14:04:20,281 [wrapper] Test setup, not cleaning
[2026-02-08 15:04:20] 2026-02-08 14:04:20,284 [wrapper] apfmon messages muted
[2026-02-08 15:04:20] 2026-02-08 14:04:20,287 [wrapper] ==== wrapper stdout END ====
[2026-02-08 15:04:20] 2026-02-08 14:04:20,289 [wrapper] ==== wrapper stderr END ====
[2026-02-08 15:04:20]  *** Error codes and diagnostics ***
[2026-02-08 15:04:20]     "exeErrorCode": 0,
[2026-02-08 15:04:20]     "exeErrorDiag": "",
[2026-02-08 15:04:20]     "pilotErrorCode": 0,
[2026-02-08 15:04:20]     "pilotErrorDiag": "",
[2026-02-08 15:04:20]  *** Listing of results directory ***
[2026-02-08 15:04:20] total 675880
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc    584422 Jan 31 22:17 pilot3.tar.gz
[2026-02-08 15:04:20] -rwx------ 1 boinc boinc     36322 Jan 31 22:18 runpilot2-wrapper.sh
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc      5111 Jan 31 22:20 queuedata.json
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc       100 Feb  8 13:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 15:04:20] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 13:11 run_atlas
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc       105 Feb  8 13:11 job.xml
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc      6255 Feb  8 13:11 init_data.xml
[2026-02-08 15:04:20] -rw-r--r-- 2 boinc boinc 498915502 Feb  8 13:11 EVNT.48317929._000180.pool.root.1
[2026-02-08 15:04:20] -rw-r--r-- 2 boinc boinc     15845 Feb  8 13:11 start_atlas.sh
[2026-02-08 15:04:20] drwxrwx--x 2 boinc boinc      4096 Feb  8 13:11 shared
[2026-02-08 15:04:20] -rw-r--r-- 2 boinc boinc    597763 Feb  8 13:11 input.tar.gz
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc         0 Feb  8 13:11 boinc_lockfile
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc      2511 Feb  8 13:11 pandaJob.out
[2026-02-08 15:04:20] -rw------- 1 boinc boinc   1009518 Feb  8 13:11 agis_schedconf.cvmfs.json
[2026-02-08 15:04:20] -rw------- 1 boinc boinc   1513088 Feb  8 13:11 agis_ddmendpoints.agis.ALL.json
[2026-02-08 15:04:20] -rw------- 1 boinc boinc       437 Feb  8 13:12 workernode_map.json
[2026-02-08 15:04:20] drwx------ 5 boinc boinc      4096 Feb  8 13:12 pilot3
[2026-02-08 15:04:20] -rw------- 1 boinc boinc 186446005 Feb  8 15:02 HITS.48317931._010032.pool.root.1
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc       530 Feb  8 15:02 boinc_task_state.xml
[2026-02-08 15:04:20] -rw------- 1 boinc boinc        95 Feb  8 15:03 pilot_heartbeat.json
[2026-02-08 15:04:20] -rw------- 1 boinc boinc      1024 Feb  8 15:03 memory_monitor_summary.json
[2026-02-08 15:04:20] -rw------- 1 boinc boinc    439646 Feb  8 15:03 log.48317931._010032.job.log.tgz.1
[2026-02-08 15:04:20] -rw------- 1 boinc boinc      6355 Feb  8 15:03 heartbeat.json
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc      8192 Feb  8 15:03 boinc_mmap_file
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc        27 Feb  8 15:03 wrapper_checkpoint.txt
[2026-02-08 15:04:20] -rw------- 1 boinc boinc      5078 Feb  8 15:04 pilotlog.txt
[2026-02-08 15:04:20] -rw------- 1 boinc boinc    960249 Feb  8 15:04 log.48317931._010032.job.log.1
[2026-02-08 15:04:20] -rw------- 1 boinc boinc       357 Feb  8 15:04 output.list
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc       620 Feb  8 15:04 runtime_log
[2026-02-08 15:04:20] -rw------- 1 boinc boinc   1413120 Feb  8 15:04 result.tar.gz
[2026-02-08 15:04:20] -rw------- 1 boinc boinc       657 Feb  8 15:04 TuaNDmPXX68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1kOKDmc0wcKo.diag
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc      8840 Feb  8 15:04 runtime_log.err
[2026-02-08 15:04:20] -rw-r--r-- 1 boinc boinc     20973 Feb  8 15:04 stderr.txt
[2026-02-08 15:04:20] HITS file was successfully produced:
[2026-02-08 15:04:20] -rw------- 1 boinc boinc 186446005 Feb  8 15:02 shared/HITS.pool.root.1
[2026-02-08 15:04:20]  *** Contents of shared directory: ***
[2026-02-08 15:04:20] total 671292
[2026-02-08 15:04:20] -rw-r--r-- 2 boinc boinc 498915502 Feb  8 13:11 ATLAS.root_0
[2026-02-08 15:04:20] -rw-r--r-- 2 boinc boinc     15845 Feb  8 13:11 start_atlas.sh
[2026-02-08 15:04:20] -rw-r--r-- 2 boinc boinc    597763 Feb  8 13:11 input.tar.gz
[2026-02-08 15:04:20] -rw------- 1 boinc boinc 186446005 Feb  8 15:02 HITS.pool.root.1
[2026-02-08 15:04:20] -rw------- 1 boinc boinc   1413120 Feb  8 15:04 result.tar.gz
15:04:22 (376282): run_atlas exited; CPU time 75551.227732
15:04:22 (376282): called boinc_finish(0)

</stderr_txt>
]]>

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