Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:33:46 (3273189): wrapper (7.7.26015): starting
04:33:46 (3273189): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 04:33:46] Arguments: --nthreads 8
[2026-02-08 04:33:46] Threads: 8
[2026-02-08 04:33:46] Checking for CVMFS
[2026-02-08 04:33:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 04:33:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 04:33:50] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 04:33:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 04:33:50] 2.13.1.0 3273336 0 30120 156005 3 1 4678547 6144000 0 130560 0 0 0.000 1336 708 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-08 04:33:50] CVMFS is ok
[2026-02-08 04:33:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 04:33:50] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-08 04:33:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-08 04:33:50] Further information can be found at the LHC@home message board.
[2026-02-08 04:33:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 04:33:50] Checking for apptainer binary...
[2026-02-08 04:33:50] apptainer is not installed, using version from CVMFS
[2026-02-08 04:33:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 04:33:51] debian
[2026-02-08 04:33:51] apptainer works
[2026-02-08 04:33:51] Set ATHENA_PROC_NUMBER=8
[2026-02-08 04:33:51] Set ATHENA_CORE_NUMBER=8
[2026-02-08 04:33:51] Starting ATLAS job with PandaID=7000878586
[2026-02-08 04:33:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/sebastien/BOINC_TEST/BOINC/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 06:00:41]  *** The last 200 lines of the pilot log: ***
[2026-02-08 06:00:41]  filetype=log
[2026-02-08 06:00:41]  guid=c0352647-9529-4180-a690-2f9c07412736
[2026-02-08 06:00:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 06:00:41]  is_altstaged=None
[2026-02-08 06:00:41]  is_tar=False
[2026-02-08 06:00:41]  lfn=log.48442031._004676.job.log.tgz.1
[2026-02-08 06:00:41]  mtime=0
[2026-02-08 06:00:41]  protocol_id=None
[2026-02-08 06:00:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 06:00:41]  replicas=None
[2026-02-08 06:00:41]  scope=mc23_13p6TeV
[2026-02-08 06:00:41]  status=None
[2026-02-08 06:00:41]  status_code=0
[2026-02-08 06:00:41]  storage_token=
[2026-02-08 06:00:41]  surl=/home/sebastien/BOINC_TEST/BOINC/slots/7/PanDA_Pilot-7000878586/log.48442031._004676.job.log.tgz.1
[2026-02-08 06:00:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/5d/log.48442031._004676.job.log.tgz.1
[2026-02-08 06:00:41]  workdir=None
[2026-02-08 06:00:41] ]
[2026-02-08 06:00:41] 2026-02-08 05:00:05,292 | INFO     | transferring file log.48442031._004676.job.log.tgz.1 from /home/sebastien/BOINC_TEST/BOINC/slots/7/PanDA_Pilot-7000878586/log.48442031._004676.job.log.tgz.1 to /ho
[2026-02-08 06:00:41] 2026-02-08 05:00:05,293 | INFO     | executing command: /usr/bin/env mv /home/sebastien/BOINC_TEST/BOINC/slots/7/PanDA_Pilot-7000878586/log.48442031._004676.job.log.tgz.1 /home/sebastien/BOINC_TEST/BO
[2026-02-08 06:00:41] 2026-02-08 05:00:05,301 | INFO     | adding to output.list: log.48442031._004676.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/5d/log.48442031._004676.job.log.tg
[2026-02-08 06:00:41] 2026-02-08 05:00:05,302 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 06:00:41] 2026-02-08 05:00:05,302 | INFO     | summary of transferred files:
[2026-02-08 06:00:41] 2026-02-08 05:00:05,302 | INFO     |  -- lfn=log.48442031._004676.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 06:00:41] 2026-02-08 05:00:05,302 | INFO     | stage-out finished correctly
[2026-02-08 06:00:41] 2026-02-08 05:00:05,735 | INFO     | time since job start (5149s) is within the limit (349056.0s)
[2026-02-08 06:00:41] 2026-02-08 05:00:07,046 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 06:00:41] 2026-02-08 05:00:07,331 | INFO     | monitor loop #387: job 0:7000878586 is in state 'finished'
[2026-02-08 06:00:41] 2026-02-08 05:00:07,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 06:00:41] 2026-02-08 05:00:07,739 | INFO     | time since job start (5151s) is within the limit (349056.0s)
[2026-02-08 06:00:41] 2026-02-08 05:00:08,747 | INFO     | job 7000878586 has state=finished
[2026-02-08 06:00:41] 2026-02-08 05:00:08,747 | INFO     | preparing for final server update for job 7000878586 in state='finished'
[2026-02-08 06:00:41] 2026-02-08 05:00:08,747 | INFO     | reading metadata from: /home/sebastien/BOINC_TEST/BOINC/slots/7/PanDA_Pilot-7000878586/jobReport.json
[2026-02-08 06:00:41] 2026-02-08 05:00:08,750 | INFO     | added worker_node to metadata from /home/sebastien/BOINC_TEST/BOINC/slots/7/workernode_map.json
[2026-02-08 06:00:41] 2026-02-08 05:00:08,750 | INFO     | this job has now completed (state=finished)
[2026-02-08 06:00:41] 2026-02-08 05:00:08,750 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 06:00:41] 2026-02-08 05:00:08,750 | INFO     | log transfer has been attempted: DONE
[2026-02-08 06:00:41] 2026-02-08 05:00:08,750 | INFO     | job 7000878586 has finished - writing final server update
[2026-02-08 06:00:41] 2026-02-08 05:00:08,751 | INFO     | total number of processed events: 400 (read)
[2026-02-08 06:00:41] 2026-02-08 05:00:08,752 | INFO     | using path: /home/sebastien/BOINC_TEST/BOINC/slots/7/PanDA_Pilot-7000878586/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 06:00:41] 2026-02-08 05:00:08,752 | INFO     | extracted standard info from prmon json
[2026-02-08 06:00:41] 2026-02-08 05:00:08,753 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 06:00:41] 2026-02-08 05:00:08,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 06:00:41] 2026-02-08 05:00:08,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 06:00:41] 2026-02-08 05:00:08,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 06:00:41] 2026-02-08 05:00:08,754 | INFO     | fitting pss+swap vs Time
[2026-02-08 06:00:41] 2026-02-08 05:00:08,754 | INFO     | sum of square deviations: 141539398.0
[2026-02-08 06:00:41] 2026-02-08 05:00:08,754 | INFO     | sum of deviations: -17302816285.999996
[2026-02-08 06:00:41] 2026-02-08 05:00:08,755 | INFO     | mean x: 1770524304.0
[2026-02-08 06:00:41] 2026-02-08 05:00:08,755 | INFO     | mean y: 2724751.987012987
[2026-02-08 06:00:41] 2026-02-08 05:00:08,755 | INFO     | intersect: 216444628525.02698
[2026-02-08 06:00:41] 2026-02-08 05:00:08,755 | INFO     | chi2: 0.13406076466844644
[2026-02-08 06:00:41] 2026-02-08 05:00:08,755 | INFO     | current memory leak: -122.25 B/s (using 77 data points, chi2=0.13)
[2026-02-08 06:00:41] 2026-02-08 05:00:08,755 | INFO     | could have reported an average CPU frequency of 3691 MHz (6 samples)
[2026-02-08 06:00:41] 2026-02-08 05:00:08,755 | INFO     | ..............................
[2026-02-08 06:00:41] 2026-02-08 05:00:08,755 | INFO     | . Timing measurements:
[2026-02-08 06:00:41] 2026-02-08 05:00:08,755 | INFO     | . get job = 0 s
[2026-02-08 06:00:41] 2026-02-08 05:00:08,756 | INFO     | . initial setup = 7 s
[2026-02-08 06:00:41] 2026-02-08 05:00:08,756 | INFO     | . payload setup = 6 s
[2026-02-08 06:00:41] 2026-02-08 05:00:08,756 | INFO     | . stage-in = 0 s
[2026-02-08 06:00:41] 2026-02-08 05:00:08,756 | INFO     | . payload execution = 5127 s
[2026-02-08 06:00:41] 2026-02-08 05:00:08,756 | INFO     | . stage-out = 0 s
[2026-02-08 06:00:41] 2026-02-08 05:00:08,756 | INFO     | . log creation = 0 s
[2026-02-08 06:00:41] 2026-02-08 05:00:08,756 | INFO     | ..............................
[2026-02-08 06:00:41] 2026-02-08 05:00:08,803 | INFO     | 
[2026-02-08 06:00:41] 2026-02-08 05:00:08,803 | INFO     | job summary report
[2026-02-08 06:00:41] 2026-02-08 05:00:08,803 | INFO     | --------------------------------------------------
[2026-02-08 06:00:41] 2026-02-08 05:00:08,803 | INFO     | PanDA job id: 7000878586
[2026-02-08 06:00:41] 2026-02-08 05:00:08,803 | INFO     | task id: 48442031
[2026-02-08 06:00:41] 2026-02-08 05:00:08,803 | INFO     | errors: (none)
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | pilot state: finished 
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | transexitcode: 0
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | exeerrorcode: 0
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | exeerrordiag: 
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | exitcode: 0
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | exitmsg: OK
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | cpuconsumptiontime: 37102 s
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | nevents: 400
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | neventsw: 0
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | pid: 3281844
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | pgrp: 3281844
[2026-02-08 06:00:41] 2026-02-08 05:00:08,804 | INFO     | corecount: 8
[2026-02-08 06:00:41] 2026-02-08 05:00:08,805 | INFO     | event service: False
[2026-02-08 06:00:41] 2026-02-08 05:00:08,805 | INFO     | sizes: {0: 2282857, 1: 2283063, 11: 2283091, 5137: 2309367, 5138: 2318456, 5140: 2318456, 5141: 2318778}
[2026-02-08 06:00:41] 2026-02-08 05:00:08,805 | INFO     | --------------------------------------------------
[2026-02-08 06:00:41] 2026-02-08 05:00:08,805 | INFO     | 
[2026-02-08 06:00:41] 2026-02-08 05:00:08,805 | INFO     | executing command: ls -lF /home/sebastien/BOINC_TEST/BOINC/slots/7
[2026-02-08 06:00:41] 2026-02-08 05:00:08,815 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,815 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,815 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,815 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 06:00:41] 2026-02-08 05:00:08,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,817 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 06:00:41] 2026-02-08 05:00:08,817 | INFO     | job 7000878586 has completed (purged errors)
[2026-02-08 06:00:41] 2026-02-08 05:00:08,817 | INFO     | overall cleanup function is called
[2026-02-08 06:00:41] 2026-02-08 05:00:08,880 | INFO     | PID=3277439 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 06:00:41] 2026-02-08 05:00:09,822 | INFO     | --- collectZombieJob: --- 10, [3281844]
[2026-02-08 06:00:41] 2026-02-08 05:00:09,823 | INFO     | zombie collector waiting for pid 3281844
[2026-02-08 06:00:41] 2026-02-08 05:00:09,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 06:00:41] 2026-02-08 05:00:09,824 | INFO     | collected zombie processes
[2026-02-08 06:00:41] 2026-02-08 05:00:09,824 | INFO     | will attempt to kill all subprocesses of pid=3281844
[2026-02-08 06:00:41] 2026-02-08 05:00:09,985 | INFO     | process IDs to be killed: [3281844] (in reverse order)
[2026-02-08 06:00:41] 2026-02-08 05:00:10,017 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 06:00:41] 2026-02-08 05:00:10,017 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 06:00:41] 2026-02-08 05:00:10,019 | INFO     | did not find any defunct processes belonging to 3281844
[2026-02-08 06:00:41] 2026-02-08 05:00:10,021 | INFO     | did not find any defunct processes belonging to 3281844
[2026-02-08 06:00:41] 2026-02-08 05:00:10,021 | INFO     | ready for new job
[2026-02-08 06:00:41] 2026-02-08 05:00:10,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 06:00:41] 2026-02-08 05:00:10,024 | INFO     | **************************************
[2026-02-08 06:00:41] 2026-02-08 05:00:10,024 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 06:00:41] 2026-02-08 05:00:10,024 | INFO     | **************************************
[2026-02-08 06:00:41] 2026-02-08 05:00:10,024 | INFO     | 
[2026-02-08 06:00:41] 2026-02-08 05:00:10,025 | INFO     | architecture information:
[2026-02-08 06:00:41] 2026-02-08 05:00:10,026 | INFO     | executing command: cat /etc/os-release
[2026-02-08 06:00:41] 2026-02-08 05:00:10,036 | INFO     | cat /etc/os-release:
[2026-02-08 06:00:41] NAME="CentOS Linux"
[2026-02-08 06:00:41] VERSION="7 (Core)"
[2026-02-08 06:00:41] ID="centos"
[2026-02-08 06:00:41] ID_LIKE="rhel fedora"
[2026-02-08 06:00:41] VERSION_ID="7"
[2026-02-08 06:00:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 06:00:41] ANSI_COLOR="0;31"
[2026-02-08 06:00:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 06:00:41] HOME_URL="https://www.centos.org/"
[2026-02-08 06:00:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 06:00:41] 
[2026-02-08 06:00:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 06:00:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 06:00:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 06:00:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 06:00:41] 
[2026-02-08 06:00:41] 2026-02-08 05:00:10,036 | INFO     | **************************************
[2026-02-08 06:00:41] 2026-02-08 05:00:10,539 | INFO     | executing command: df -mP /home/sebastien/BOINC_TEST/BOINC/slots/7
[2026-02-08 06:00:41] 2026-02-08 05:00:10,550 | INFO     | sufficient remaining disk space (65461551104 B)
[2026-02-08 06:00:41] 2026-02-08 05:00:10,550 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 06:00:41] 2026-02-08 05:00:10,551 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 06:00:41] 2026-02-08 05:00:10,551 | INFO     | update_server=False
[2026-02-08 06:00:41] 2026-02-08 05:00:10,551 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 06:00:41] 2026-02-08 05:00:10,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 06:00:41] 2026-02-08 05:00:10,791 | INFO     | all data control threads have been joined
[2026-02-08 06:00:41] 2026-02-08 05:00:10,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 06:00:41] 2026-02-08 05:00:10,843 | INFO     | aborting loop
[2026-02-08 06:00:41] 2026-02-08 05:00:10,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 06:00:41] 2026-02-08 05:00:11,070 | INFO     | all payload control threads have been joined
[2026-02-08 06:00:41] 2026-02-08 05:00:11,555 | INFO     | [job] queue monitor thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:11,555 | INFO     | [job] retrieve thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:11,627 | INFO     | [payload] failed_post thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:11,726 | INFO     | all job control threads have been joined
[2026-02-08 06:00:41] 2026-02-08 05:00:11,795 | INFO     | [data] control thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:11,847 | INFO     | [job] job monitor thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:12,077 | INFO     | [payload] control thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:12,279 | INFO     | [payload] validate_post thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:12,423 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:12,483 | INFO     | [job] validate thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:12,523 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:12,731 | INFO     | [job] control thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:12,843 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:12,855 | INFO     | [data] copytool_out thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:13,043 | INFO     | [data] copytool_in thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:13,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 06:00:41] 2026-02-08 05:00:17,163 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:20,967 | INFO     | job.realtimelogging is not enabled
[2026-02-08 06:00:41] 2026-02-08 05:00:21,973 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 06:00:41] 2026-02-08 05:00:24,198 | INFO     | [monitor] cgroup control has ended
[2026-02-08 06:00:41] 2026-02-08 05:00:25,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461314692928)>', '<ExcThread(monitor, started 140460597180160)>']
[2026-02-08 06:00:41] 2026-02-08 05:00:30,214 | INFO     | all workflow threads have been joined
[2026-02-08 06:00:41] 2026-02-08 05:00:30,215 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 06:00:41] 2026-02-08 05:00:30,215 | INFO     | traces error code: 0
[2026-02-08 06:00:41] 2026-02-08 05:00:30,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 06:00:41] 2026-02-08 05:00:41,106 | INFO     | PID=3277439 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 06:00:41] 2026-02-08 05:00:41,107 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 06:00:41] 2026-02-08 05:00:41,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 06:00:41] 2026-02-08 05:00:41,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 06:00:41] 2026-02-08 05:00:41,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 06:00:41] 2026-02-08 05:00:41,107 | INFO     | [monitor] control thread has ended
[2026-02-08 06:00:41] 2026-02-08 05:00:41,196 [wrapper] ==== pilot stdout END ====
[2026-02-08 06:00:41] 2026-02-08 05:00:41,198 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 06:00:41] 2026-02-08 05:00:41,199 [wrapper] pilotpid: 3277439
[2026-02-08 06:00:41] 2026-02-08 05:00:41,200 [wrapper] Pilot exit status: 0
[2026-02-08 06:00:41] 2026-02-08 05:00:41,205 [wrapper] pandaids: 7000878586
[2026-02-08 06:00:41] 2026-02-08 05:00:41,218 [wrapper] cleanup supervisor_pilot 3287602 3277440
[2026-02-08 06:00:41] 2026-02-08 05:00:41,221 [wrapper] Test setup, not cleaning
[2026-02-08 06:00:41] 2026-02-08 05:00:41,223 [wrapper] apfmon messages muted
[2026-02-08 06:00:41] 2026-02-08 05:00:41,224 [wrapper] ==== wrapper stdout END ====
[2026-02-08 06:00:41] 2026-02-08 05:00:41,226 [wrapper] ==== wrapper stderr END ====
[2026-02-08 06:00:41]  *** Error codes and diagnostics ***
[2026-02-08 06:00:41]     "exeErrorCode": 0,
[2026-02-08 06:00:41]     "exeErrorDiag": "",
[2026-02-08 06:00:41]     "pilotErrorCode": 0,
[2026-02-08 06:00:41]     "pilotErrorDiag": "",
[2026-02-08 06:00:41]  *** Listing of results directory ***
[2026-02-08 06:00:41] total 659980
[2026-02-08 06:00:41] -rwx------ 1 sebastien sebastien     36322  7 f&#195;&#169;vr. 21:47 runpilot2-wrapper.sh
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien    584627  7 f&#195;&#169;vr. 21:49 pilot3.tar.gz
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien      5111  7 f&#195;&#169;vr. 21:49 queuedata.json
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien       100  8 f&#195;&#169;vr. 04:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 06:00:41] -rwxr-xr-x 1 sebastien sebastien      7986  8 f&#195;&#169;vr. 04:33 run_atlas
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien       105  8 f&#195;&#169;vr. 04:33 job.xml
[2026-02-08 06:00:41] -rw-r--r-- 2 sebastien sebastien     15845  8 f&#195;&#169;vr. 04:33 start_atlas.sh
[2026-02-08 06:00:41] drwxrwx--x 2 sebastien sebastien      4096  8 f&#195;&#169;vr. 04:33 shared
[2026-02-08 06:00:41] -rw-r--r-- 2 sebastien sebastien    597950  8 f&#195;&#169;vr. 04:33 input.tar.gz
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien      6677  8 f&#195;&#169;vr. 04:33 init_data.xml
[2026-02-08 06:00:41] -rw-r--r-- 2 sebastien sebastien 491113689  8 f&#195;&#169;vr. 04:33 EVNT.48442027._000093.pool.root.1
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien         0  8 f&#195;&#169;vr. 04:33 boinc_lockfile
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien      2529  8 f&#195;&#169;vr. 04:33 pandaJob.out
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien   1009526  8 f&#195;&#169;vr. 04:34 agis_schedconf.cvmfs.json
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien   1513088  8 f&#195;&#169;vr. 04:34 agis_ddmendpoints.agis.ALL.json
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien       417  8 f&#195;&#169;vr. 04:34 workernode_map.json
[2026-02-08 06:00:41] drwx------ 5 sebastien sebastien      4096  8 f&#195;&#169;vr. 04:34 pilot3
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien 178554674  8 f&#195;&#169;vr. 05:59 HITS.48442031._004676.pool.root.1
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien       530  8 f&#195;&#169;vr. 05:59 boinc_task_state.xml
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien      1032  8 f&#195;&#169;vr. 06:00 memory_monitor_summary.json
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien    348250  8 f&#195;&#169;vr. 06:00 log.48442031._004676.job.log.tgz.1
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien      6303  8 f&#195;&#169;vr. 06:00 heartbeat.json
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien        27  8 f&#195;&#169;vr. 06:00 wrapper_checkpoint.txt
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien      8192  8 f&#195;&#169;vr. 06:00 boinc_mmap_file
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien       747  8 f&#195;&#169;vr. 06:00 pilotlog.txt
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien        95  8 f&#195;&#169;vr. 06:00 pilot_heartbeat.json
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien    756251  8 f&#195;&#169;vr. 06:00 log.48442031._004676.job.log.1
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien       357  8 f&#195;&#169;vr. 06:00 output.list
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien       620  8 f&#195;&#169;vr. 06:00 runtime_log
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien   1126400  8 f&#195;&#169;vr. 06:00 result.tar.gz
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien      9180  8 f&#195;&#169;vr. 06:00 runtime_log.err
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien       683  8 f&#195;&#169;vr. 06:00 IzgMDmcO488n9Rq4apOajLDm4fhM0noT9bVooX4SDmjmbKDmIXnUam.diag
[2026-02-08 06:00:41] -rw-r--r-- 1 sebastien sebastien     21586  8 f&#195;&#169;vr. 06:00 stderr.txt
[2026-02-08 06:00:41] HITS file was successfully produced:
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien 178554674  8 f&#195;&#169;vr. 05:59 shared/HITS.pool.root.1
[2026-02-08 06:00:41]  *** Contents of shared directory: ***
[2026-02-08 06:00:41] total 655684
[2026-02-08 06:00:41] -rw-r--r-- 2 sebastien sebastien     15845  8 f&#195;&#169;vr. 04:33 start_atlas.sh
[2026-02-08 06:00:41] -rw-r--r-- 2 sebastien sebastien    597950  8 f&#195;&#169;vr. 04:33 input.tar.gz
[2026-02-08 06:00:41] -rw-r--r-- 2 sebastien sebastien 491113689  8 f&#195;&#169;vr. 04:33 ATLAS.root_0
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien 178554674  8 f&#195;&#169;vr. 05:59 HITS.pool.root.1
[2026-02-08 06:00:41] -rw------- 1 sebastien sebastien   1126400  8 f&#195;&#169;vr. 06:00 result.tar.gz
06:00:43 (3273189): run_atlas exited; CPU time 37156.635932
06:00:43 (3273189): called boinc_finish(0)

</stderr_txt>
]]>

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