Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
02:10:24 (122112): wrapper (7.7.26015): starting
02:10:24 (122112): wrapper: running run_atlas (--nthreads 6)
[2026-02-09 02:10:24] Arguments: --nthreads 6
[2026-02-09 02:10:24] Threads: 6
[2026-02-09 02:10:24] Checking for CVMFS
[2026-02-09 02:10:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 02:10:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 02:10:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 02:10:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 02:10:28] 2.11.5.0 51193 83 46232 156038 0 50 2549825 4194305 1836 130560 0 134787 99.987 4227 1116 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2026-02-09 02:10:28] CVMFS is ok
[2026-02-09 02:10:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 02:10:28] Checking for apptainer binary...
[2026-02-09 02:10:28] apptainer is not installed, using version from CVMFS
[2026-02-09 02:10:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 02:10:29] boinc-b450f
[2026-02-09 02:10:29] apptainer works
[2026-02-09 02:10:29] Set ATHENA_PROC_NUMBER=6
[2026-02-09 02:10:29] Set ATHENA_CORE_NUMBER=6
[2026-02-09 02:10:29] Starting ATLAS job with PandaID=7007143830
[2026-02-09 02:10:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 04:02:59]  *** The last 200 lines of the pilot log: ***
[2026-02-09 04:02:59] 2026-02-09 03:02:17,149 | INFO     | using path: /var/lib/boinc-client/slots/8/PanDA_Pilot-7007143830/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 04:02:59] 2026-02-09 03:02:17,149 | INFO     | extracted standard info from prmon json
[2026-02-09 04:02:59] 2026-02-09 03:02:17,149 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 04:02:59] 2026-02-09 03:02:17,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 04:02:59] 2026-02-09 03:02:17,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 04:02:59] 2026-02-09 03:02:17,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 04:02:59] 2026-02-09 03:02:17,151 | INFO     | fitting pss+swap vs Time
[2026-02-09 04:02:59] 2026-02-09 03:02:17,151 | INFO     | sum of square deviations: 412686807.5
[2026-02-09 04:02:59] 2026-02-09 03:02:17,151 | INFO     | sum of deviations: 2983032614.000003
[2026-02-09 04:02:59] 2026-02-09 03:02:17,151 | INFO     | mean x: 1770602783.5
[2026-02-09 04:02:59] 2026-02-09 03:02:17,151 | INFO     | mean y: 2428231.5090909093
[2026-02-09 04:02:59] 2026-02-09 03:02:17,151 | INFO     | intersect: -12796056608.885733
[2026-02-09 04:02:59] 2026-02-09 03:02:17,152 | INFO     | chi2: 1.759253862959207
[2026-02-09 04:02:59] 2026-02-09 03:02:17,152 | INFO     | sum of square deviations: 358927660.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,152 | INFO     | sum of deviations: 9234749801.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,152 | INFO     | mean x: 1770602631.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,152 | INFO     | mean y: 2445262.3238095236
[2026-02-09 04:02:59] 2026-02-09 03:02:17,152 | INFO     | intersect: -45552896709.028656
[2026-02-09 04:02:59] 2026-02-09 03:02:17,152 | INFO     | chi2: 1.0778005539800073
[2026-02-09 04:02:59] 2026-02-09 03:02:17,152 | INFO     | current chi2=1.0778005539800073 (change=38.735359536624244 %)
[2026-02-09 04:02:59] 2026-02-09 03:02:17,153 | INFO     | sum of square deviations: 310052325.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,153 | INFO     | sum of deviations: 8614540963.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,153 | INFO     | mean x: 1770602478.5
[2026-02-09 04:02:59] 2026-02-09 03:02:17,153 | INFO     | mean y: 2443325.8
[2026-02-09 04:02:59] 2026-02-09 03:02:17,153 | INFO     | intersect: -49192245281.12328
[2026-02-09 04:02:59] 2026-02-09 03:02:17,153 | INFO     | chi2: 1.0797964473252442
[2026-02-09 04:02:59] 2026-02-09 03:02:17,153 | INFO     | current chi2=1.0797964473252442 (change=-0.18518206711497834 %)
[2026-02-09 04:02:59] 2026-02-09 03:02:17,153 | INFO     | right removable region: 99
[2026-02-09 04:02:59] 2026-02-09 03:02:17,153 | INFO     | sum of square deviations: 358927660.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,154 | INFO     | sum of deviations: -4623572897.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,154 | INFO     | mean x: 1770602936.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,154 | INFO     | mean y: 2448784.1904761903
[2026-02-09 04:02:59] 2026-02-09 03:02:17,154 | INFO     | intersect: 22810698631.076683
[2026-02-09 04:02:59] 2026-02-09 03:02:17,154 | INFO     | chi2: 0.711006500742845
[2026-02-09 04:02:59] 2026-02-09 03:02:17,154 | INFO     | current chi2=0.711006500742845 (change=59.58476967349813 %)
[2026-02-09 04:02:59] 2026-02-09 03:02:17,154 | INFO     | sum of square deviations: 310052325.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | sum of deviations: -4986214816.5
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | mean x: 1770603088.5
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | mean y: 2449903.17
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | intersect: 28477022232.274002
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | chi2: 0.7107842653260158
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | current chi2=0.7107842653260158 (change=0.0312564535763049 %)
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | left removable region: 20
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | sum of square deviations: 152858680.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | sum of deviations: 508783005.00000006
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | mean x: 1770603058.0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | mean y: 2470256.481012658
[2026-02-09 04:02:59] 2026-02-09 03:02:17,155 | INFO     | intersect: -5890899649.051532
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | chi2: 0.0005403187024779543
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | current memory leak: 3.33 B/s (using 79 data points, chi2=0.00)
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | could have reported an average CPU frequency of 3918 MHz (7 samples)
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | ..............................
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | . Timing measurements:
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | . get job = 0 s
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | . initial setup = 3 s
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | . payload setup = 3 s
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | . stage-in = 0 s
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | . payload execution = 6674 s
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | . stage-out = 0 s
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | . log creation = 0 s
[2026-02-09 04:02:59] 2026-02-09 03:02:17,156 | INFO     | ..............................
[2026-02-09 04:02:59] 2026-02-09 03:02:17,197 | INFO     | 
[2026-02-09 04:02:59] 2026-02-09 03:02:17,197 | INFO     | job summary report
[2026-02-09 04:02:59] 2026-02-09 03:02:17,197 | INFO     | --------------------------------------------------
[2026-02-09 04:02:59] 2026-02-09 03:02:17,197 | INFO     | PanDA job id: 7007143830
[2026-02-09 04:02:59] 2026-02-09 03:02:17,197 | INFO     | task id: 48431096
[2026-02-09 04:02:59] 2026-02-09 03:02:17,197 | INFO     | errors: (none)
[2026-02-09 04:02:59] 2026-02-09 03:02:17,197 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | pilot state: finished 
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | transexitcode: 0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | exeerrorcode: 0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | exeerrordiag: 
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | exitcode: 0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | exitmsg: OK
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | cpuconsumptiontime: 38679 s
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | nevents: 400
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | neventsw: 0
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | pid: 132955
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | pgrp: 132955
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | corecount: 6
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | event service: False
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | sizes: {0: 2283089, 11: 2283089, 6680: 2310378, 6681: 2310377, 6682: 2319501, 6684: 2319639}
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | --------------------------------------------------
[2026-02-09 04:02:59] 2026-02-09 03:02:17,198 | INFO     | 
[2026-02-09 04:02:59] 2026-02-09 03:02:17,199 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/8
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,206 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 04:02:59] 2026-02-09 03:02:17,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,206 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 04:02:59] 2026-02-09 03:02:17,206 | INFO     | job 7007143830 has completed (purged errors)
[2026-02-09 04:02:59] 2026-02-09 03:02:17,206 | INFO     | overall cleanup function is called
[2026-02-09 04:02:59] 2026-02-09 03:02:17,912 | INFO     | PID=127811 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 04:02:59] 2026-02-09 03:02:17,912 | INFO     | .. there are 2 such processes running
[2026-02-09 04:02:59] 2026-02-09 03:02:18,214 | INFO     | --- collectZombieJob: --- 10, [132955]
[2026-02-09 04:02:59] 2026-02-09 03:02:18,215 | INFO     | zombie collector waiting for pid 132955
[2026-02-09 04:02:59] 2026-02-09 03:02:18,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 04:02:59] 2026-02-09 03:02:18,215 | INFO     | collected zombie processes
[2026-02-09 04:02:59] 2026-02-09 03:02:18,215 | INFO     | will attempt to kill all subprocesses of pid=132955
[2026-02-09 04:02:59] 2026-02-09 03:02:18,279 | INFO     | process IDs to be killed: [132955] (in reverse order)
[2026-02-09 04:02:59] 2026-02-09 03:02:18,297 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 04:02:59] 2026-02-09 03:02:18,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 04:02:59] 2026-02-09 03:02:18,299 | INFO     | did not find any defunct processes belonging to 132955
[2026-02-09 04:02:59] 2026-02-09 03:02:18,301 | INFO     | did not find any defunct processes belonging to 132955
[2026-02-09 04:02:59] 2026-02-09 03:02:18,301 | INFO     | ready for new job
[2026-02-09 04:02:59] 2026-02-09 03:02:18,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 04:02:59] 2026-02-09 03:02:18,302 | INFO     | **************************************
[2026-02-09 04:02:59] 2026-02-09 03:02:18,302 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 04:02:59] 2026-02-09 03:02:18,302 | INFO     | **************************************
[2026-02-09 04:02:59] 2026-02-09 03:02:18,302 | INFO     | 
[2026-02-09 04:02:59] 2026-02-09 03:02:18,302 | INFO     | architecture information:
[2026-02-09 04:02:59] 2026-02-09 03:02:18,303 | INFO     | executing command: cat /etc/os-release
[2026-02-09 04:02:59] 2026-02-09 03:02:18,307 | INFO     | cat /etc/os-release:
[2026-02-09 04:02:59] NAME="CentOS Linux"
[2026-02-09 04:02:59] VERSION="7 (Core)"
[2026-02-09 04:02:59] ID="centos"
[2026-02-09 04:02:59] ID_LIKE="rhel fedora"
[2026-02-09 04:02:59] VERSION_ID="7"
[2026-02-09 04:02:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 04:02:59] ANSI_COLOR="0;31"
[2026-02-09 04:02:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 04:02:59] HOME_URL="https://www.centos.org/"
[2026-02-09 04:02:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 04:02:59] 
[2026-02-09 04:02:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 04:02:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 04:02:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 04:02:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 04:02:59] 
[2026-02-09 04:02:59] 2026-02-09 03:02:18,308 | INFO     | **************************************
[2026-02-09 04:02:59] 2026-02-09 03:02:18,810 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/8
[2026-02-09 04:02:59] 2026-02-09 03:02:18,817 | INFO     | sufficient remaining disk space (19031654400 B)
[2026-02-09 04:02:59] 2026-02-09 03:02:18,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 04:02:59] 2026-02-09 03:02:18,818 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 04:02:59] 2026-02-09 03:02:18,818 | INFO     | update_server=False
[2026-02-09 04:02:59] 2026-02-09 03:02:18,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 04:02:59] 2026-02-09 03:02:18,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 04:02:59] 2026-02-09 03:02:18,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 04:02:59] 2026-02-09 03:02:18,818 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-09 04:02:59] 2026-02-09 03:02:18,818 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 04:02:59] 2026-02-09 03:02:18,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 04:02:59] 2026-02-09 03:02:18,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 04:02:59] 2026-02-09 03:02:19,064 | INFO     | all job control threads have been joined
[2026-02-09 04:02:59] 2026-02-09 03:02:19,202 | INFO     | all data control threads have been joined
[2026-02-09 04:02:59] 2026-02-09 03:02:19,210 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-09 04:02:59] 2026-02-09 03:02:19,210 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-09 04:02:59] 2026-02-09 03:02:19,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 04:02:59] 2026-02-09 03:02:19,210 | INFO     | will abort loop
[2026-02-09 04:02:59] 2026-02-09 03:02:19,304 | INFO     | all payload control threads have been joined
[2026-02-09 04:02:59] 2026-02-09 03:02:19,774 | INFO     | job.realtimelogging is not enabled
[2026-02-09 04:02:59] 2026-02-09 03:02:19,818 | INFO     | [job] retrieve thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:19,823 | INFO     | [job] queue monitor thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,053 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,070 | INFO     | [job] control thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,126 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,166 | INFO     | [payload] validate_post thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,204 | INFO     | [data] control thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,214 | INFO     | [job] job monitor thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,309 | INFO     | [payload] control thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,444 | INFO     | [job] validate thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,603 | INFO     | [payload] failed_post thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,775 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,824 | INFO     | [data] copytool_out thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:20,842 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:21,152 | INFO     | [data] copytool_in thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:21,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 04:02:59] 2026-02-09 03:02:25,293 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 04:02:59] 2026-02-09 03:02:52,804 | INFO     | [monitor] cgroup control has ended
[2026-02-09 04:02:59] 2026-02-09 03:02:54,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975993276224)>', '<ExcThread(monitor, started 139975316199168)>']
[2026-02-09 04:02:59] 2026-02-09 03:02:54,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 04:02:59] 2026-02-09 03:02:54,995 | INFO     | [monitor] control thread has ended
[2026-02-09 04:02:59] 2026-02-09 03:02:59,153 | INFO     | all workflow threads have been joined
[2026-02-09 04:02:59] 2026-02-09 03:02:59,154 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 04:02:59] 2026-02-09 03:02:59,154 | INFO     | traces error code: 0
[2026-02-09 04:02:59] 2026-02-09 03:02:59,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 04:02:59] 2026-02-09 03:02:59,213 [wrapper] ==== pilot stdout END ====
[2026-02-09 04:02:59] 2026-02-09 03:02:59,215 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 04:02:59] 2026-02-09 03:02:59,216 [wrapper] pilotpid: 127811
[2026-02-09 04:02:59] 2026-02-09 03:02:59,217 [wrapper] Pilot exit status: 0
[2026-02-09 04:02:59] 2026-02-09 03:02:59,221 [wrapper] pandaids: 7007143830
[2026-02-09 04:02:59] 2026-02-09 03:02:59,236 [wrapper] cleanup supervisor_pilot  198679 127812
[2026-02-09 04:02:59] 2026-02-09 03:02:59,238 [wrapper] Test setup, not cleaning
[2026-02-09 04:02:59] 2026-02-09 03:02:59,239 [wrapper] apfmon messages muted
[2026-02-09 04:02:59] 2026-02-09 03:02:59,240 [wrapper] ==== wrapper stdout END ====
[2026-02-09 04:02:59] 2026-02-09 03:02:59,242 [wrapper] ==== wrapper stderr END ====
[2026-02-09 04:02:59]  *** Error codes and diagnostics ***
[2026-02-09 04:02:59]     "exeErrorCode": 0,
[2026-02-09 04:02:59]     "exeErrorDiag": "",
[2026-02-09 04:02:59]     "pilotErrorCode": 0,
[2026-02-09 04:02:59]     "pilotErrorDiag": "",
[2026-02-09 04:02:59]  *** Listing of results directory ***
[2026-02-09 04:02:59] total 944126
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc    584627 Feb  8 02:03 pilot3.tar.gz
[2026-02-09 04:02:59] -rwx------ 1 boinc boinc     36322 Feb  8 02:06 runpilot2-wrapper.sh
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc      5111 Feb  8 02:09 queuedata.json
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc       100 Feb  9 02:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 04:02:59] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 02:10 run_atlas
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc       105 Feb  9 02:10 job.xml
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc      6795 Feb  9 02:10 init_data.xml
[2026-02-09 04:02:59] -rw-r--r-- 2 boinc boinc 678262725 Feb  9 02:10 EVNT.48431094._000320.pool.root.1
[2026-02-09 04:02:59] -rw-r--r-- 2 boinc boinc     15845 Feb  9 02:10 start_atlas.sh
[2026-02-09 04:02:59] drwxrwx--x 2 boinc boinc         5 Feb  9 02:10 shared
[2026-02-09 04:02:59] -rw-r--r-- 2 boinc boinc    597961 Feb  9 02:10 input.tar.gz
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc         0 Feb  9 02:10 boinc_lockfile
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc      2554 Feb  9 02:10 pandaJob.out
[2026-02-09 04:02:59] -rw------- 1 boinc boinc        56 Feb  9 02:10 setup.sh.local
[2026-02-09 04:02:59] -rw------- 1 boinc boinc   1009504 Feb  9 02:10 agis_schedconf.cvmfs.json
[2026-02-09 04:02:59] -rw------- 1 boinc boinc   1513088 Feb  9 02:10 agis_ddmendpoints.agis.ALL.json
[2026-02-09 04:02:59] -rw------- 1 boinc boinc       425 Feb  9 02:10 workernode_map.json
[2026-02-09 04:02:59] drwx------ 5 boinc boinc        22 Feb  9 02:10 pilot3
[2026-02-09 04:02:59] -rw------- 1 boinc boinc        95 Feb  9 04:01 pilot_heartbeat.json
[2026-02-09 04:02:59] -rw------- 1 boinc boinc 286126511 Feb  9 04:01 HITS.48431096._008692.pool.root.1
[2026-02-09 04:02:59] -rw------- 1 boinc boinc      1028 Feb  9 04:02 memory_monitor_summary.json
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc       530 Feb  9 04:02 boinc_task_state.xml
[2026-02-09 04:02:59] -rw------- 1 boinc boinc    352355 Feb  9 04:02 log.48431096._008692.job.log.tgz.1
[2026-02-09 04:02:59] -rw------- 1 boinc boinc      6300 Feb  9 04:02 heartbeat.json
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc      8192 Feb  9 04:02 boinc_mmap_file
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc        27 Feb  9 04:02 wrapper_checkpoint.txt
[2026-02-09 04:02:59] -rw------- 1 boinc boinc      4813 Feb  9 04:02 pilotlog.txt
[2026-02-09 04:02:59] -rw------- 1 boinc boinc    989441 Feb  9 04:02 log.48431096._008692.job.log.1
[2026-02-09 04:02:59] -rw------- 1 boinc boinc       658 Feb  9 04:02 T3ELDmGR888n9Rq4apOajLDm4fhM0noT9bVooX4SDmpAcKDmClwRTm.diag
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc      9463 Feb  9 04:02 runtime_log.err
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc       620 Feb  9 04:02 runtime_log
[2026-02-09 04:02:59] -rw------- 1 boinc boinc   1361920 Feb  9 04:02 result.tar.gz
[2026-02-09 04:02:59] -rw------- 1 boinc boinc       357 Feb  9 04:02 output.list
[2026-02-09 04:02:59] -rw-r--r-- 1 boinc boinc     20744 Feb  9 04:02 stderr.txt
[2026-02-09 04:02:59] HITS file was successfully produced:
[2026-02-09 04:02:59] -rw------- 1 boinc boinc 286126511 Feb  9 04:01 shared/HITS.pool.root.1
[2026-02-09 04:02:59]  *** Contents of shared directory: ***
[2026-02-09 04:02:59] total 942979
[2026-02-09 04:02:59] -rw-r--r-- 2 boinc boinc 678262725 Feb  9 02:10 ATLAS.root_0
[2026-02-09 04:02:59] -rw-r--r-- 2 boinc boinc     15845 Feb  9 02:10 start_atlas.sh
[2026-02-09 04:02:59] -rw-r--r-- 2 boinc boinc    597961 Feb  9 02:10 input.tar.gz
[2026-02-09 04:02:59] -rw------- 1 boinc boinc 286126511 Feb  9 04:01 HITS.pool.root.1
[2026-02-09 04:02:59] -rw------- 1 boinc boinc   1361920 Feb  9 04:02 result.tar.gz
04:03:01 (122112): run_atlas exited; CPU time 38767.675808
04:03:01 (122112): called boinc_finish(0)

</stderr_txt>
]]>

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