Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:47:42 (1054633): wrapper (7.7.26015): starting
22:47:42 (1054633): wrapper: running run_atlas (--nthreads 10)
[2026-02-07 22:47:42] Arguments: --nthreads 10
[2026-02-07 22:47:42] Threads: 10
[2026-02-07 22:47:42] Checking for CVMFS
[2026-02-07 22:47:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 22:47:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 22:47:43] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 22:47:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 22:47:43] 2.13.3.0 8081 64182 198436 156005 3 98 33501328 39288832 7167 16776704 0 45166750 99.629 53664706 39710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 22:47:43] CVMFS is ok
[2026-02-07 22:47:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 22:47:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 22:47:43] Further information can be found at the LHC@home message board.
[2026-02-07 22:47:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 22:47:43] Checking for apptainer binary...
[2026-02-07 22:47:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 22:47:43] Running /usr/bin/apptainer --version
[2026-02-07 22:47:43] apptainer version 1.4.5-2.el9
[2026-02-07 22:47:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 22:47:43] c-210-13.aglt2.org
[2026-02-07 22:47:43] apptainer works
[2026-02-07 22:47:43] Set ATHENA_PROC_NUMBER=10
[2026-02-07 22:47:43] Set ATHENA_CORE_NUMBER=10
[2026-02-07 22:47:43] Starting ATLAS job with PandaID=6998620691
[2026-02-07 22:47:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 01:04:44]  *** The last 200 lines of the pilot log: ***
[2026-02-08 01:04:44] 2026-02-08 06:04:10,404 | INFO     | intersect: 28247404296.257484
[2026-02-08 01:04:44] 2026-02-08 06:04:10,404 | INFO     | chi2: 2.3870341398489296
[2026-02-08 01:04:44] 2026-02-08 06:04:10,404 | INFO     | sum of square deviations: 665713957.8139505
[2026-02-08 01:04:44] 2026-02-08 06:04:10,405 | INFO     | sum of deviations: -2461443974.95349
[2026-02-08 01:04:44] 2026-02-08 06:04:10,405 | INFO     | mean x: 1770526404.4418604
[2026-02-08 01:04:44] 2026-02-08 06:04:10,405 | INFO     | mean y: 2631036.472868217
[2026-02-08 01:04:44] 2026-02-08 06:04:10,405 | INFO     | intersect: 6549063628.963956
[2026-02-08 01:04:44] 2026-02-08 06:04:10,406 | INFO     | chi2: 1.6618512735049904
[2026-02-08 01:04:44] 2026-02-08 06:04:10,406 | INFO     | current chi2=1.6618512735049904 (change=30.380079372883813 %)
[2026-02-08 01:04:44] 2026-02-08 06:04:10,406 | INFO     | sum of square deviations: 591292736.7983859
[2026-02-08 01:04:44] 2026-02-08 06:04:10,407 | INFO     | sum of deviations: -2186738011.459677
[2026-02-08 01:04:44] 2026-02-08 06:04:10,407 | INFO     | mean x: 1770526251.9596775
[2026-02-08 01:04:44] 2026-02-08 06:04:10,407 | INFO     | mean y: 2631600.5080645164
[2026-02-08 01:04:44] 2026-02-08 06:04:10,407 | INFO     | intersect: 6550449313.289463
[2026-02-08 01:04:44] 2026-02-08 06:04:10,407 | INFO     | chi2: 1.6618453787665723
[2026-02-08 01:04:44] 2026-02-08 06:04:10,408 | INFO     | current chi2=1.6618453787665723 (change=0.0003547091434736329 %)
[2026-02-08 01:04:44] 2026-02-08 06:04:10,408 | INFO     | right removable region: 123
[2026-02-08 01:04:44] 2026-02-08 06:04:10,408 | INFO     | sum of square deviations: 665679187.8139505
[2026-02-08 01:04:44] 2026-02-08 06:04:10,409 | INFO     | sum of deviations: -31670898449.04651
[2026-02-08 01:04:44] 2026-02-08 06:04:10,409 | INFO     | mean x: 1770526709.4418604
[2026-02-08 01:04:44] 2026-02-08 06:04:10,409 | INFO     | mean y: 2650420.527131783
[2026-02-08 01:04:44] 2026-02-08 06:04:10,409 | INFO     | intersect: 84238679791.07387
[2026-02-08 01:04:44] 2026-02-08 06:04:10,409 | INFO     | chi2: 0.9648492606857876
[2026-02-08 01:04:44] 2026-02-08 06:04:10,410 | INFO     | current chi2=0.9648492606857876 (change=59.57957849958313 %)
[2026-02-08 01:04:44] 2026-02-08 06:04:10,410 | INFO     | sum of square deviations: 591223196.7983859
[2026-02-08 01:04:44] 2026-02-08 06:04:10,410 | INFO     | sum of deviations: -29230862704.725807
[2026-02-08 01:04:44] 2026-02-08 06:04:10,411 | INFO     | mean x: 1770526861.9596775
[2026-02-08 01:04:44] 2026-02-08 06:04:10,411 | INFO     | mean y: 2645285.85483871
[2026-02-08 01:04:44] 2026-02-08 06:04:10,411 | INFO     | intersect: 87539852718.23015
[2026-02-08 01:04:44] 2026-02-08 06:04:10,411 | INFO     | chi2: 0.947091896928818
[2026-02-08 01:04:44] 2026-02-08 06:04:10,411 | INFO     | current chi2=0.947091896928818 (change=1.840428808988063 %)
[2026-02-08 01:04:44] 2026-02-08 06:04:10,411 | INFO     | left removable region: 20
[2026-02-08 01:04:44] 2026-02-08 06:04:10,412 | INFO     | sum of square deviations: 338857285.4563113
[2026-02-08 01:04:44] 2026-02-08 06:04:10,412 | INFO     | sum of deviations: -8221562209.067961
[2026-02-08 01:04:44] 2026-02-08 06:04:10,412 | INFO     | mean x: 1770526831.5533981
[2026-02-08 01:04:44] 2026-02-08 06:04:10,412 | INFO     | mean y: 2638142.194174757
[2026-02-08 01:04:44] 2026-02-08 06:04:10,413 | INFO     | intersect: 42960240393.0598
[2026-02-08 01:04:44] 2026-02-08 06:04:10,413 | INFO     | chi2: 0.12029430671571789
[2026-02-08 01:04:44] 2026-02-08 06:04:10,413 | INFO     | current memory leak: -24.26 B/s (using 103 data points, chi2=0.12)
[2026-02-08 01:04:44] 2026-02-08 06:04:10,413 | INFO     | could have reported an average CPU frequency of 2600 MHz (8 samples)
[2026-02-08 01:04:44] 2026-02-08 06:04:10,414 | INFO     | ..............................
[2026-02-08 01:04:44] 2026-02-08 06:04:10,414 | INFO     | . Timing measurements:
[2026-02-08 01:04:44] 2026-02-08 06:04:10,414 | INFO     | . get job = 0 s
[2026-02-08 01:04:44] 2026-02-08 06:04:10,414 | INFO     | . initial setup = 8 s
[2026-02-08 01:04:44] 2026-02-08 06:04:10,414 | INFO     | . payload setup = 9 s
[2026-02-08 01:04:44] 2026-02-08 06:04:10,414 | INFO     | . stage-in = 0 s
[2026-02-08 01:04:44] 2026-02-08 06:04:10,414 | INFO     | . payload execution = 8147 s
[2026-02-08 01:04:44] 2026-02-08 06:04:10,415 | INFO     | . stage-out = 2 s
[2026-02-08 01:04:44] 2026-02-08 06:04:10,415 | INFO     | . log creation = 0 s
[2026-02-08 01:04:44] 2026-02-08 06:04:10,415 | INFO     | ..............................
[2026-02-08 01:04:44] 2026-02-08 06:04:10,692 | INFO     | 
[2026-02-08 01:04:44] 2026-02-08 06:04:10,693 | INFO     | job summary report
[2026-02-08 01:04:44] 2026-02-08 06:04:10,693 | INFO     | --------------------------------------------------
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | PanDA job id: 6998620691
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | task id: 48318026
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | errors: (none)
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | pilot state: finished 
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | transexitcode: 0
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | exeerrorcode: 0
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | exeerrordiag: 
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | exitcode: 0
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | exitmsg: OK
[2026-02-08 01:04:44] 2026-02-08 06:04:10,694 | INFO     | cpuconsumptiontime: 54445 s
[2026-02-08 01:04:44] 2026-02-08 06:04:10,695 | INFO     | nevents: 400
[2026-02-08 01:04:44] 2026-02-08 06:04:10,695 | INFO     | neventsw: 0
[2026-02-08 01:04:44] 2026-02-08 06:04:10,695 | INFO     | pid: 1063297
[2026-02-08 01:04:44] 2026-02-08 06:04:10,695 | INFO     | pgrp: 1063297
[2026-02-08 01:04:44] 2026-02-08 06:04:10,695 | INFO     | corecount: 10
[2026-02-08 01:04:44] 2026-02-08 06:04:10,695 | INFO     | event service: False
[2026-02-08 01:04:44] 2026-02-08 06:04:10,695 | INFO     | sizes: {0: 2282651, 1: 2283112, 2: 2283112, 8159: 2310895, 8160: 2310894, 8162: 2320132, 8165: 2320270}
[2026-02-08 01:04:44] 2026-02-08 06:04:10,695 | INFO     | --------------------------------------------------
[2026-02-08 01:04:44] 2026-02-08 06:04:10,695 | INFO     | 
[2026-02-08 01:04:44] 2026-02-08 06:04:10,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-08 01:04:44] 2026-02-08 06:04:10,803 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,804 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,804 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,804 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,805 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 01:04:44] 2026-02-08 06:04:10,806 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,806 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 01:04:44] 2026-02-08 06:04:10,806 | INFO     | job 6998620691 has completed (purged errors)
[2026-02-08 01:04:44] 2026-02-08 06:04:10,806 | INFO     | overall cleanup function is called
[2026-02-08 01:04:44] 2026-02-08 06:04:10,976 | WARNING  | process 1063297 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 01:04:44] 2026-02-08 06:04:11,201 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 01:04:44] 2026-02-08 06:04:11,202 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 01:04:44] 2026-02-08 06:04:11,202 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-08 01:04:44] 2026-02-08 06:04:11,203 | WARNING  | maxPSS not found in memory monitor output
[2026-02-08 01:04:44] 2026-02-08 06:04:11,203 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6998620691/payload.stdout) since it has not been created yet
[2026-02-08 01:04:44] 2026-02-08 06:04:11,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-08 01:04:44] 2026-02-08 06:04:11,224 | INFO     | sufficient remaining disk space (49349132288 B)
[2026-02-08 01:04:44] 2026-02-08 06:04:11,225 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-08 01:04:44] 2026-02-08 06:04:11,225 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6998620691/HITS.48318026._005142.pool.root.1 since it does not exist
[2026-02-08 01:04:44] 2026-02-08 06:04:11,550 | INFO     | number of running child processes to parent process 1063297: 1
[2026-02-08 01:04:44] 2026-02-08 06:04:11,550 | INFO     | maximum number of monitored processes: 6
[2026-02-08 01:04:44] 2026-02-08 06:04:11,550 | INFO     | aborting job monitoring since job object (job id=6998620691) has expired
[2026-02-08 01:04:44] 2026-02-08 06:04:11,832 | INFO     | --- collectZombieJob: --- 10, [1063297]
[2026-02-08 01:04:44] 2026-02-08 06:04:11,832 | INFO     | zombie collector waiting for pid 1063297
[2026-02-08 01:04:44] 2026-02-08 06:04:11,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 01:04:44] 2026-02-08 06:04:11,833 | INFO     | collected zombie processes
[2026-02-08 01:04:44] 2026-02-08 06:04:11,833 | INFO     | will attempt to kill all subprocesses of pid=1063297
[2026-02-08 01:04:44] 2026-02-08 06:04:12,153 | INFO     | process IDs to be killed: [1063297] (in reverse order)
[2026-02-08 01:04:44] 2026-02-08 06:04:12,228 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 01:04:44] 2026-02-08 06:04:12,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 01:04:44] 2026-02-08 06:04:12,239 | INFO     | did not find any defunct processes belonging to 1063297
[2026-02-08 01:04:44] 2026-02-08 06:04:12,248 | INFO     | did not find any defunct processes belonging to 1063297
[2026-02-08 01:04:44] 2026-02-08 06:04:12,249 | INFO     | ready for new job
[2026-02-08 01:04:44] 2026-02-08 06:04:12,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 01:04:44] 2026-02-08 06:04:12,251 | INFO     | **************************************
[2026-02-08 01:04:44] 2026-02-08 06:04:12,251 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 01:04:44] 2026-02-08 06:04:12,251 | INFO     | **************************************
[2026-02-08 01:04:44] 2026-02-08 06:04:12,251 | INFO     | 
[2026-02-08 01:04:44] 2026-02-08 06:04:12,253 | INFO     | architecture information:
[2026-02-08 01:04:44] 2026-02-08 06:04:12,254 | INFO     | executing command: cat /etc/os-release
[2026-02-08 01:04:44] 2026-02-08 06:04:12,270 | INFO     | cat /etc/os-release:
[2026-02-08 01:04:44] NAME="CentOS Linux"
[2026-02-08 01:04:44] VERSION="7 (Core)"
[2026-02-08 01:04:44] ID="centos"
[2026-02-08 01:04:44] ID_LIKE="rhel fedora"
[2026-02-08 01:04:44] VERSION_ID="7"
[2026-02-08 01:04:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 01:04:44] ANSI_COLOR="0;31"
[2026-02-08 01:04:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 01:04:44] HOME_URL="https://www.centos.org/"
[2026-02-08 01:04:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 01:04:44] 
[2026-02-08 01:04:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 01:04:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 01:04:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 01:04:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 01:04:44] 
[2026-02-08 01:04:44] 2026-02-08 06:04:12,270 | INFO     | **************************************
[2026-02-08 01:04:44] 2026-02-08 06:04:12,776 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-08 01:04:44] 2026-02-08 06:04:12,809 | INFO     | sufficient remaining disk space (49350180864 B)
[2026-02-08 01:04:44] 2026-02-08 06:04:12,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 01:04:44] 2026-02-08 06:04:12,810 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 01:04:44] 2026-02-08 06:04:12,810 | INFO     | update_server=False
[2026-02-08 01:04:44] 2026-02-08 06:04:12,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 01:04:44] 2026-02-08 06:04:12,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 01:04:44] 2026-02-08 06:04:12,811 | INFO     | aborting loop
[2026-02-08 01:04:44] 2026-02-08 06:04:13,241 | INFO     | all job control threads have been joined
[2026-02-08 01:04:44] 2026-02-08 06:04:13,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 01:04:44] 2026-02-08 06:04:13,444 | INFO     | all payload control threads have been joined
[2026-02-08 01:04:44] 2026-02-08 06:04:13,816 | INFO     | [job] retrieve thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:13,817 | INFO     | [job] job monitor thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:13,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 01:04:44] 2026-02-08 06:04:13,868 | INFO     | all data control threads have been joined
[2026-02-08 01:04:44] 2026-02-08 06:04:13,977 | INFO     | [job] validate thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:14,003 | INFO     | [data] copytool_in thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:14,262 | INFO     | [job] control thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:14,324 | INFO     | [payload] validate_post thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:14,450 | INFO     | [payload] control thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:14,489 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:14,615 | INFO     | [payload] failed_post thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:14,843 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:14,878 | INFO     | [data] control thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:15,111 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:15,296 | INFO     | [data] copytool_out thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:15,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 01:04:44] 2026-02-08 06:04:16,714 | INFO     | [job] queue monitor thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:17,539 | INFO     | [monitor] cgroup control has ended
[2026-02-08 01:04:44] 2026-02-08 06:04:17,876 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:23,743 | INFO     | job.realtimelogging is not enabled
[2026-02-08 01:04:44] 2026-02-08 06:04:24,750 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 01:04:44] 2026-02-08 06:04:25,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140641472911168)>', '<ExcThread(monitor, started 140641111631616)>']
[2026-02-08 01:04:44] 2026-02-08 06:04:30,870 | INFO     | all workflow threads have been joined
[2026-02-08 01:04:44] 2026-02-08 06:04:30,870 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 01:04:44] 2026-02-08 06:04:30,871 | INFO     | traces error code: 0
[2026-02-08 01:04:44] 2026-02-08 06:04:30,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 01:04:44] 2026-02-08 06:04:43,720 | INFO     | PID=1058660 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 01:04:44] 2026-02-08 06:04:43,721 | INFO     | .. there are 9 such processes running
[2026-02-08 01:04:44] 2026-02-08 06:04:43,729 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 01:04:44] 2026-02-08 06:04:43,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 01:04:44] 2026-02-08 06:04:43,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 01:04:44] 2026-02-08 06:04:43,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 01:04:44] 2026-02-08 06:04:43,730 | CRITICAL | thread 'MainThread' is not alive
[2026-02-08 01:04:44] 2026-02-08 06:04:43,730 | INFO     | [monitor] control thread has ended
[2026-02-08 01:04:44] 2026-02-08 06:04:44,367 [wrapper] ==== pilot stdout END ====
[2026-02-08 01:04:44] 2026-02-08 06:04:44,370 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 01:04:44] 2026-02-08 06:04:44,372 [wrapper] pilotpid: 1058660
[2026-02-08 01:04:44] 2026-02-08 06:04:44,374 [wrapper] Pilot exit status: 0
[2026-02-08 01:04:44] 2026-02-08 06:04:44,392 [wrapper] pandaids: 6998620691
[2026-02-08 01:04:44] 2026-02-08 06:04:44,437 [wrapper] cleanup supervisor_pilot 1303206 1058661
[2026-02-08 01:04:44] 2026-02-08 06:04:44,439 [wrapper] Test setup, not cleaning
[2026-02-08 01:04:44] 2026-02-08 06:04:44,442 [wrapper] apfmon messages muted
[2026-02-08 01:04:44] 2026-02-08 06:04:44,444 [wrapper] ==== wrapper stdout END ====
[2026-02-08 01:04:44] 2026-02-08 06:04:44,446 [wrapper] ==== wrapper stderr END ====
[2026-02-08 01:04:44]  *** Error codes and diagnostics ***
[2026-02-08 01:04:44]     "exeErrorCode": 0,
[2026-02-08 01:04:44]     "exeErrorDiag": "",
[2026-02-08 01:04:44]     "pilotErrorCode": 0,
[2026-02-08 01:04:44]     "pilotErrorDiag": "",
[2026-02-08 01:04:44]  *** Listing of results directory ***
[2026-02-08 01:04:44] total 732264
[2026-02-08 01:04:44] -rwx------. 1 boincer umatlas     36322 Feb  6 20:46 runpilot2-wrapper.sh
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas    584627 Feb  6 20:47 pilot3.tar.gz
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas      5111 Feb  6 20:50 queuedata.json
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas       100 Feb  7 22:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 01:04:44] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 22:47 run_atlas
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas       105 Feb  7 22:47 job.xml
[2026-02-08 01:04:44] -rw-r--r--. 2 boincer umatlas 537578635 Feb  7 22:47 EVNT.48318024._000103.pool.root.1
[2026-02-08 01:04:44] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 22:47 shared
[2026-02-08 01:04:44] -rw-r--r--. 2 boincer umatlas    597959 Feb  7 22:47 input.tar.gz
[2026-02-08 01:04:44] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 22:47 start_atlas.sh
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas         0 Feb  7 22:47 boinc_lockfile
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas      2527 Feb  7 22:47 pandaJob.out
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas        57 Feb  7 22:47 setup.sh.local
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas   1009526 Feb  7 22:47 agis_schedconf.cvmfs.json
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas   1513088 Feb  7 22:47 agis_ddmendpoints.agis.ALL.json
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas       442 Feb  7 22:48 workernode_map.json
[2026-02-08 01:04:44] drwx------. 5 boincer umatlas      4096 Feb  7 22:48 pilot3
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas      6659 Feb  8 01:00 init_data.xml
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas       530 Feb  8 01:03 boinc_task_state.xml
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas 205214484 Feb  8 01:03 HITS.48318026._005142.pool.root.1
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas      1040 Feb  8 01:04 memory_monitor_summary.json
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas    421532 Feb  8 01:04 log.48318026._005142.job.log.tgz.1
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas      6384 Feb  8 01:04 heartbeat.json
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas        27 Feb  8 01:04 wrapper_checkpoint.txt
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas      8192 Feb  8 01:04 boinc_mmap_file
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas        95 Feb  8 01:04 pilot_heartbeat.json
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas       892 Feb  8 01:04 pilotlog.txt
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas   1132376 Feb  8 01:04 log.48318026._005142.job.log.1
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas       357 Feb  8 01:04 output.list
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas       620 Feb  8 01:04 runtime_log
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas   1566720 Feb  8 01:04 result.tar.gz
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas      9343 Feb  8 01:04 runtime_log.err
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas       653 Feb  8 01:04 AZzMDmRam88n9Rq4apOajLDm4fhM0noT9bVooX4SDmVzZKDmJw21Km.diag
[2026-02-08 01:04:44] -rw-r--r--. 1 boincer umatlas     21514 Feb  8 01:04 stderr.txt
[2026-02-08 01:04:44] HITS file was successfully produced:
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas 205214484 Feb  8 01:03 shared/HITS.pool.root.1
[2026-02-08 01:04:44]  *** Contents of shared directory: ***
[2026-02-08 01:04:44] total 727528
[2026-02-08 01:04:44] -rw-r--r--. 2 boincer umatlas 537578635 Feb  7 22:47 ATLAS.root_0
[2026-02-08 01:04:44] -rw-r--r--. 2 boincer umatlas    597959 Feb  7 22:47 input.tar.gz
[2026-02-08 01:04:44] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 22:47 start_atlas.sh
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas 205214484 Feb  8 01:03 HITS.pool.root.1
[2026-02-08 01:04:44] -rw-------. 1 boincer umatlas   1566720 Feb  8 01:04 result.tar.gz
01:04:45 (1054633): run_atlas exited; CPU time 54660.057914
01:04:45 (1054633): called boinc_finish(0)

</stderr_txt>
]]>

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