Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:42:16 (2690932): wrapper (7.7.26015): starting
20:42:16 (2690932): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 20:42:16] Arguments: --nthreads 8
[2026-02-07 20:42:16] Threads: 8
[2026-02-07 20:42:16] Checking for CVMFS
[2026-02-07 20:42:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 20:42:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 20:42:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 20:42:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 20:42:18] 2.13.3.0 7835 65461 352960 156002 3 523 22802167 40960000 14707 16776704 0 106027945 99.577 122095419 37175 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 20:42:18] CVMFS is ok
[2026-02-07 20:42:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 20:42:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 20:42:18] Further information can be found at the LHC@home message board.
[2026-02-07 20:42:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 20:42:18] Checking for apptainer binary...
[2026-02-07 20:42:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 20:42:18] Running /usr/bin/apptainer --version
[2026-02-07 20:42:18] apptainer version 1.4.5-2.el9
[2026-02-07 20:42:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 20:42:19] c-210-33-4.aglt2.org
[2026-02-07 20:42:19] apptainer works
[2026-02-07 20:42:19] Set ATHENA_PROC_NUMBER=8
[2026-02-07 20:42:19] Set ATHENA_CORE_NUMBER=8
[2026-02-07 20:42:19] Starting ATLAS job with PandaID=6987929980
[2026-02-07 20:42:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 00:47:49]  *** The last 200 lines of the pilot log: ***
[2026-02-08 00:47:49] 2026-02-08 05:47:14,027 | INFO     | job 6987929980 has state=finished
[2026-02-08 00:47:49] 2026-02-08 05:47:14,027 | INFO     | preparing for final server update for job 6987929980 in state='finished'
[2026-02-08 00:47:49] 2026-02-08 05:47:14,027 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6987929980/jobReport.json
[2026-02-08 00:47:49] 2026-02-08 05:47:14,030 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-08 00:47:49] 2026-02-08 05:47:14,030 | INFO     | this job has now completed (state=finished)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,030 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,031 | INFO     | log transfer has been attempted: DONE
[2026-02-08 00:47:49] 2026-02-08 05:47:14,031 | INFO     | job 6987929980 has finished - writing final server update
[2026-02-08 00:47:49] 2026-02-08 05:47:14,031 | INFO     | total number of processed events: 400 (read)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,041 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6987929980/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,041 | INFO     | extracted standard info from prmon json
[2026-02-08 00:47:49] 2026-02-08 05:47:14,042 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 00:47:49] 2026-02-08 05:47:14,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 00:47:49] 2026-02-08 05:47:14,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 00:47:49] 2026-02-08 05:47:14,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 00:47:49] 2026-02-08 05:47:14,046 | INFO     | fitting pss+swap vs Time
[2026-02-08 00:47:49] 2026-02-08 05:47:14,046 | INFO     | sum of square deviations: 4232857652.937234
[2026-02-08 00:47:49] 2026-02-08 05:47:14,048 | INFO     | sum of deviations: 27524954600.24266
[2026-02-08 00:47:49] 2026-02-08 05:47:14,048 | INFO     | mean x: 1770522319.251046
[2026-02-08 00:47:49] 2026-02-08 05:47:14,048 | INFO     | mean y: 2486657.029288703
[2026-02-08 00:47:49] 2026-02-08 05:47:14,048 | INFO     | intersect: -11510668391.377441
[2026-02-08 00:47:49] 2026-02-08 05:47:14,049 | INFO     | chi2: 3.64478368624503
[2026-02-08 00:47:49] 2026-02-08 05:47:14,049 | INFO     | sum of square deviations: 3972712935.115376
[2026-02-08 00:47:49] 2026-02-08 05:47:14,050 | INFO     | sum of deviations: 43513697741.57693
[2026-02-08 00:47:49] 2026-02-08 05:47:14,051 | INFO     | mean x: 1770522166.7564104
[2026-02-08 00:47:49] 2026-02-08 05:47:14,051 | INFO     | mean y: 2495861.1153846155
[2026-02-08 00:47:49] 2026-02-08 05:47:14,051 | INFO     | intersect: -19390288784.363373
[2026-02-08 00:47:49] 2026-02-08 05:47:14,051 | INFO     | chi2: 2.7921759864437927
[2026-02-08 00:47:49] 2026-02-08 05:47:14,051 | INFO     | current chi2=2.7921759864437927 (change=23.39254598342489 %)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,051 | INFO     | right removable region: 233
[2026-02-08 00:47:49] 2026-02-08 05:47:14,052 | INFO     | sum of square deviations: 3972719702.6153917
[2026-02-08 00:47:49] 2026-02-08 05:47:14,053 | INFO     | sum of deviations: -30563399296.794876
[2026-02-08 00:47:49] 2026-02-08 05:47:14,053 | INFO     | mean x: 1770522471.7435896
[2026-02-08 00:47:49] 2026-02-08 05:47:14,053 | INFO     | mean y: 2520593.136752137
[2026-02-08 00:47:49] 2026-02-08 05:47:14,053 | INFO     | intersect: 13623714464.988018
[2026-02-08 00:47:49] 2026-02-08 05:47:14,054 | INFO     | chi2: 1.2745090710359013
[2026-02-08 00:47:49] 2026-02-08 05:47:14,054 | INFO     | current chi2=1.2745090710359013 (change=65.03196950080348 %)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,054 | INFO     | sum of square deviations: 3723465923.2663856
[2026-02-08 00:47:49] 2026-02-08 05:47:14,055 | INFO     | sum of deviations: -42277702387.06114
[2026-02-08 00:47:49] 2026-02-08 05:47:14,056 | INFO     | mean x: 1770522624.235808
[2026-02-08 00:47:49] 2026-02-08 05:47:14,056 | INFO     | mean y: 2527716.519650655
[2026-02-08 00:47:49] 2026-02-08 05:47:14,056 | INFO     | intersect: 20105740722.786434
[2026-02-08 00:47:49] 2026-02-08 05:47:14,056 | INFO     | chi2: 1.138509977193572
[2026-02-08 00:47:49] 2026-02-08 05:47:14,056 | INFO     | current chi2=1.138509977193572 (change=10.670704268255326 %)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,056 | INFO     | left removable region: 20
[2026-02-08 00:47:49] 2026-02-08 05:47:14,057 | INFO     | sum of square deviations: 2996245026.262932
[2026-02-08 00:47:49] 2026-02-08 05:47:14,058 | INFO     | sum of deviations: -16575413709.718334
[2026-02-08 00:47:49] 2026-02-08 05:47:14,058 | INFO     | mean x: 1770522746.2347417
[2026-02-08 00:47:49] 2026-02-08 05:47:14,058 | INFO     | mean y: 2531983.3943661973
[2026-02-08 00:47:49] 2026-02-08 05:47:14,058 | INFO     | intersect: 9797173858.16478
[2026-02-08 00:47:49] 2026-02-08 05:47:14,058 | INFO     | chi2: 0.19988152948123125
[2026-02-08 00:47:49] 2026-02-08 05:47:14,059 | INFO     | current memory leak: -5.53 B/s (using 213 data points, chi2=0.20)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,059 | INFO     | could have reported an average CPU frequency of 2783 MHz (12 samples)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,059 | INFO     | ..............................
[2026-02-08 00:47:49] 2026-02-08 05:47:14,059 | INFO     | . Timing measurements:
[2026-02-08 00:47:49] 2026-02-08 05:47:14,060 | INFO     | . get job = 0 s
[2026-02-08 00:47:49] 2026-02-08 05:47:14,060 | INFO     | . initial setup = 21 s
[2026-02-08 00:47:49] 2026-02-08 05:47:14,060 | INFO     | . payload setup = 27 s
[2026-02-08 00:47:49] 2026-02-08 05:47:14,060 | INFO     | . stage-in = 0 s
[2026-02-08 00:47:49] 2026-02-08 05:47:14,060 | INFO     | . payload execution = 14586 s
[2026-02-08 00:47:49] 2026-02-08 05:47:14,060 | INFO     | . stage-out = 3 s
[2026-02-08 00:47:49] 2026-02-08 05:47:14,060 | INFO     | . log creation = 0 s
[2026-02-08 00:47:49] 2026-02-08 05:47:14,060 | INFO     | ..............................
[2026-02-08 00:47:49] 2026-02-08 05:47:14,068 | INFO     | time since job start (14636s) is within the limit (349056.0s)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,382 | INFO     | 
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | job summary report
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | --------------------------------------------------
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | PanDA job id: 6987929980
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | task id: 48318042
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | errors: (none)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | pilot state: finished 
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | transexitcode: 0
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | exeerrorcode: 0
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | exeerrordiag: 
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | exitcode: 0
[2026-02-08 00:47:49] 2026-02-08 05:47:14,392 | INFO     | exitmsg: OK
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | cpuconsumptiontime: 43168 s
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | nevents: 400
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | neventsw: 0
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | pid: 2701412
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | pgrp: 2701412
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | corecount: 8
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | event service: False
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | sizes: {0: 2282669, 1: 2283130, 12: 2283130, 14617: 2314002, 14618: 2314001, 14623: 2323239, 14624: 2323377}
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | --------------------------------------------------
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | 
[2026-02-08 00:47:49] 2026-02-08 05:47:14,393 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-08 00:47:49] 2026-02-08 05:47:14,581 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,583 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,583 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 00:47:49] 2026-02-08 05:47:14,583 | INFO     | job 6987929980 has completed (purged errors)
[2026-02-08 00:47:49] 2026-02-08 05:47:14,583 | INFO     | overall cleanup function is called
[2026-02-08 00:47:49] 2026-02-08 05:47:15,642 | INFO     | --- collectZombieJob: --- 10, [2701412]
[2026-02-08 00:47:49] 2026-02-08 05:47:15,643 | INFO     | zombie collector waiting for pid 2701412
[2026-02-08 00:47:49] 2026-02-08 05:47:15,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 00:47:49] 2026-02-08 05:47:15,643 | INFO     | collected zombie processes
[2026-02-08 00:47:49] 2026-02-08 05:47:15,643 | INFO     | will attempt to kill all subprocesses of pid=2701412
[2026-02-08 00:47:49] 2026-02-08 05:47:16,455 | INFO     | PID=2695265 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 00:47:49] 2026-02-08 05:47:16,469 | INFO     | .. there are 18 such processes running
[2026-02-08 00:47:49] 2026-02-08 05:47:16,553 | INFO     | process IDs to be killed: [2701412] (in reverse order)
[2026-02-08 00:47:49] 2026-02-08 05:47:16,749 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 00:47:49] 2026-02-08 05:47:16,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 00:47:49] 2026-02-08 05:47:16,766 | INFO     | did not find any defunct processes belonging to 2701412
[2026-02-08 00:47:49] 2026-02-08 05:47:16,778 | INFO     | did not find any defunct processes belonging to 2701412
[2026-02-08 00:47:49] 2026-02-08 05:47:16,778 | INFO     | ready for new job
[2026-02-08 00:47:49] 2026-02-08 05:47:16,778 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 00:47:49] 2026-02-08 05:47:16,780 | INFO     | **************************************
[2026-02-08 00:47:49] 2026-02-08 05:47:16,781 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-08 00:47:49] 2026-02-08 05:47:16,781 | INFO     | **************************************
[2026-02-08 00:47:49] 2026-02-08 05:47:16,781 | INFO     | 
[2026-02-08 00:47:49] 2026-02-08 05:47:16,784 | INFO     | architecture information:
[2026-02-08 00:47:49] 2026-02-08 05:47:16,784 | INFO     | executing command: cat /etc/os-release
[2026-02-08 00:47:49] 2026-02-08 05:47:16,827 | INFO     | cat /etc/os-release:
[2026-02-08 00:47:49] NAME="CentOS Linux"
[2026-02-08 00:47:49] VERSION="7 (Core)"
[2026-02-08 00:47:49] ID="centos"
[2026-02-08 00:47:49] ID_LIKE="rhel fedora"
[2026-02-08 00:47:49] VERSION_ID="7"
[2026-02-08 00:47:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 00:47:49] ANSI_COLOR="0;31"
[2026-02-08 00:47:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 00:47:49] HOME_URL="https://www.centos.org/"
[2026-02-08 00:47:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 00:47:49] 
[2026-02-08 00:47:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 00:47:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 00:47:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 00:47:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 00:47:49] 
[2026-02-08 00:47:49] 2026-02-08 05:47:16,827 | INFO     | **************************************
[2026-02-08 00:47:49] 2026-02-08 05:47:17,331 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-08 00:47:49] 2026-02-08 05:47:17,383 | INFO     | sufficient remaining disk space (70057459712 B)
[2026-02-08 00:47:49] 2026-02-08 05:47:17,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 00:47:49] 2026-02-08 05:47:17,383 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 00:47:49] 2026-02-08 05:47:17,384 | INFO     | update_server=False
[2026-02-08 00:47:49] 2026-02-08 05:47:17,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 00:47:49] 2026-02-08 05:47:17,384 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-08 00:47:49] 2026-02-08 05:47:17,385 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 00:47:49] 2026-02-08 05:47:17,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 00:47:49] 2026-02-08 05:47:17,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 00:47:49] 2026-02-08 05:47:17,451 | INFO     | all data control threads have been joined
[2026-02-08 00:47:49] 2026-02-08 05:47:17,729 | INFO     | all payload control threads have been joined
[2026-02-08 00:47:49] 2026-02-08 05:47:17,944 | INFO     | all job control threads have been joined
[2026-02-08 00:47:49] 2026-02-08 05:47:18,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 00:47:49] 2026-02-08 05:47:18,078 | INFO     | aborting loop
[2026-02-08 00:47:49] 2026-02-08 05:47:18,390 | INFO     | [job] retrieve thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:18,458 | INFO     | [data] control thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:18,574 | INFO     | [data] copytool_in thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:18,655 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:18,736 | INFO     | [payload] control thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:18,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 00:47:49] 2026-02-08 05:47:18,891 | INFO     | [payload] failed_post thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:18,951 | INFO     | [job] control thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:19,084 | INFO     | [job] job monitor thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:19,095 | INFO     | [job] validate thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:19,189 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 00:47:49] 2026-02-08 05:47:19,401 | INFO     | [payload] validate_post thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:19,430 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:19,578 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:19,579 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:20,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 00:47:49] 2026-02-08 05:47:20,195 | INFO     | [job] queue monitor thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:20,762 | INFO     | [data] copytool_out thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:24,081 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 00:47:49] 2026-02-08 05:47:43,794 | INFO     | [monitor] cgroup control has ended
[2026-02-08 00:47:49] 2026-02-08 05:47:44,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938526230336)>', '<ExcThread(monitor, started 139938079172352)>']
[2026-02-08 00:47:49] 2026-02-08 05:47:44,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 00:47:49] 2026-02-08 05:47:44,599 | INFO     | [monitor] control thread has ended
[2026-02-08 00:47:49] 2026-02-08 05:47:49,507 | INFO     | all workflow threads have been joined
[2026-02-08 00:47:49] 2026-02-08 05:47:49,508 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 00:47:49] 2026-02-08 05:47:49,508 | INFO     | traces error code: 0
[2026-02-08 00:47:49] 2026-02-08 05:47:49,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 00:47:49] 2026-02-08 05:47:49,668 [wrapper] ==== pilot stdout END ====
[2026-02-08 00:47:49] 2026-02-08 05:47:49,671 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 00:47:49] 2026-02-08 05:47:49,673 [wrapper] pilotpid: 2695265
[2026-02-08 00:47:49] 2026-02-08 05:47:49,675 [wrapper] Pilot exit status: 0
[2026-02-08 00:47:49] 2026-02-08 05:47:49,687 [wrapper] pandaids: 6987929980
[2026-02-08 00:47:49] 2026-02-08 05:47:49,754 [wrapper] cleanup supervisor_pilot 3254867 2695266
[2026-02-08 00:47:49] 2026-02-08 05:47:49,758 [wrapper] Test setup, not cleaning
[2026-02-08 00:47:49] 2026-02-08 05:47:49,760 [wrapper] apfmon messages muted
[2026-02-08 00:47:49] 2026-02-08 05:47:49,763 [wrapper] ==== wrapper stdout END ====
[2026-02-08 00:47:49] 2026-02-08 05:47:49,765 [wrapper] ==== wrapper stderr END ====
[2026-02-08 00:47:49]  *** Error codes and diagnostics ***
[2026-02-08 00:47:49]     "exeErrorCode": 0,
[2026-02-08 00:47:49]     "exeErrorDiag": "",
[2026-02-08 00:47:49]     "pilotErrorCode": 0,
[2026-02-08 00:47:49]     "pilotErrorDiag": "",
[2026-02-08 00:47:49]  *** Listing of results directory ***
[2026-02-08 00:47:49] total 678644
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas    584422 Jan 30 13:43 pilot3.tar.gz
[2026-02-08 00:47:49] -rwx------. 1 boincer umatlas     36322 Jan 30 13:56 runpilot2-wrapper.sh
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas      5111 Jan 30 13:56 queuedata.json
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas       100 Feb  7 20:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 00:47:49] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 20:42 run_atlas
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas       105 Feb  7 20:42 job.xml
[2026-02-08 00:47:49] -rw-r--r--. 2 boincer umatlas 503115794 Feb  7 20:42 EVNT.48318040._000058.pool.root.1
[2026-02-08 00:47:49] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 20:42 shared
[2026-02-08 00:47:49] -rw-r--r--. 2 boincer umatlas    597764 Feb  7 20:42 input.tar.gz
[2026-02-08 00:47:49] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 20:42 start_atlas.sh
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas         0 Feb  7 20:42 boinc_lockfile
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas      2536 Feb  7 20:42 pandaJob.out
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas        57 Feb  7 20:42 setup.sh.local
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas   1009510 Feb  7 20:42 agis_schedconf.cvmfs.json
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas       443 Feb  7 20:43 workernode_map.json
[2026-02-08 00:47:49] drwx------. 5 boincer umatlas      4096 Feb  7 20:43 pilot3
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas      6844 Feb  8 00:40 init_data.xml
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas 183024109 Feb  8 00:46 HITS.48318042._002939.pool.root.1
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas       531 Feb  8 00:46 boinc_task_state.xml
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas        95 Feb  8 00:46 pilot_heartbeat.json
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas      1045 Feb  8 00:47 memory_monitor_summary.json
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas   1513088 Feb  8 00:47 agis_ddmendpoints.agis.ALL.json
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas    488231 Feb  8 00:47 log.48318042._002939.job.log.tgz.1
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas      6397 Feb  8 00:47 heartbeat.json
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas      8192 Feb  8 00:47 boinc_mmap_file
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas        28 Feb  8 00:47 wrapper_checkpoint.txt
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas      4548 Feb  8 00:47 pilotlog.txt
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas   1935105 Feb  8 00:47 log.48318042._002939.job.log.1
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas       357 Feb  8 00:47 output.list
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas       620 Feb  8 00:47 runtime_log
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas   2437120 Feb  8 00:47 result.tar.gz
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas      9352 Feb  8 00:47 runtime_log.err
[2026-02-08 00:47:49] -rw-------. 1 boincer umatlas       657 Feb  8 00:47 d8WNDmIq858n9Rq4apOajLDm4fhM0noT9bVooX4SDmFmLKDmulwidn.diag
[2026-02-08 00:47:49] -rw-r--r--. 1 boincer umatlas     21359 Feb  8 00:47 stderr.txt
[2026-02-08 00:47:50] HITS file was successfully produced:
[2026-02-08 00:47:50] -rw-------. 1 boincer umatlas 183024109 Feb  8 00:46 shared/HITS.pool.root.1
[2026-02-08 00:47:50]  *** Contents of shared directory: ***
[2026-02-08 00:47:50] total 673052
[2026-02-08 00:47:50] -rw-r--r--. 2 boincer umatlas 503115794 Feb  7 20:42 ATLAS.root_0
[2026-02-08 00:47:50] -rw-r--r--. 2 boincer umatlas    597764 Feb  7 20:42 input.tar.gz
[2026-02-08 00:47:50] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 20:42 start_atlas.sh
[2026-02-08 00:47:50] -rw-------. 1 boincer umatlas 183024109 Feb  8 00:46 HITS.pool.root.1
[2026-02-08 00:47:50] -rw-------. 1 boincer umatlas   2437120 Feb  8 00:47 result.tar.gz
00:47:51 (2690932): run_atlas exited; CPU time 43594.060392
00:47:51 (2690932): called boinc_finish(0)

</stderr_txt>
]]>

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