Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:56:04 (4225): wrapper (7.7.26015): starting
18:56:04 (4225): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 18:56:04] Arguments: --nthreads 8
[2026-02-07 18:56:04] Threads: 8
[2026-02-07 18:56:04] Checking for CVMFS
[2026-02-07 18:56:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 18:56:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 18:56:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 18:56:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 18:56:05] 2.11.2.0 2857 173444 133292 156000 3 52 15949423 20275201 1 130560 0 46961631 99.827 12708055 28995 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 18:56:05] CVMFS is ok
[2026-02-07 18:56:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 18:56:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 18:56:05] Further information can be found at the LHC@home message board.
[2026-02-07 18:56:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 18:56:05] Checking for apptainer binary...
[2026-02-07 18:56:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 18:56:05] Running /usr/bin/apptainer --version
[2026-02-07 18:56:05] apptainer version 1.3.2-1.el7
[2026-02-07 18:56:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 18:56:07] c-204-10.aglt2.org
[2026-02-07 18:56:07] apptainer works
[2026-02-07 18:56:07] Set ATHENA_PROC_NUMBER=8
[2026-02-07 18:56:07] Set ATHENA_CORE_NUMBER=8
[2026-02-07 18:56:07] Starting ATLAS job with PandaID=7000875215
[2026-02-07 18:56:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 21:15:50]  *** The last 200 lines of the pilot log: ***
[2026-02-07 21:15:50] 2026-02-08 02:15:12,901 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 21:15:50] 2026-02-08 02:15:12,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 21:15:50] 2026-02-08 02:15:12,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 21:15:50] 2026-02-08 02:15:12,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 21:15:50] 2026-02-08 02:15:12,904 | INFO     | fitting pss+swap vs Time
[2026-02-07 21:15:50] 2026-02-08 02:15:12,904 | INFO     | sum of square deviations: 779958810.0
[2026-02-07 21:15:50] 2026-02-08 02:15:12,905 | INFO     | sum of deviations: 11589802665.0
[2026-02-07 21:15:50] 2026-02-08 02:15:12,905 | INFO     | mean x: 1770512733.5
[2026-02-07 21:15:50] 2026-02-08 02:15:12,905 | INFO     | mean y: 2494573.0
[2026-02-07 21:15:50] 2026-02-08 02:15:12,905 | INFO     | intersect: -26306450122.598392
[2026-02-07 21:15:50] 2026-02-08 02:15:12,906 | INFO     | chi2: 1.5413319303854105
[2026-02-07 21:15:50] 2026-02-08 02:15:12,906 | INFO     | sum of square deviations: 697054930.0
[2026-02-07 21:15:50] 2026-02-08 02:15:12,907 | INFO     | sum of deviations: 11147640505.0
[2026-02-07 21:15:50] 2026-02-08 02:15:12,907 | INFO     | mean x: 1770512581.0
[2026-02-07 21:15:50] 2026-02-08 02:15:12,907 | INFO     | mean y: 2493759.290076336
[2026-02-07 21:15:50] 2026-02-08 02:15:12,907 | INFO     | intersect: -28312402116.37311
[2026-02-07 21:15:50] 2026-02-08 02:15:12,907 | INFO     | chi2: 1.5435207554068187
[2026-02-07 21:15:50] 2026-02-08 02:15:12,907 | INFO     | current chi2=1.5435207554068187 (change=-0.14200867303520026 %)
[2026-02-07 21:15:50] 2026-02-08 02:15:12,908 | INFO     | right removable region: 130
[2026-02-07 21:15:50] 2026-02-08 02:15:12,908 | INFO     | sum of square deviations: 697054930.0
[2026-02-07 21:15:50] 2026-02-08 02:15:12,908 | INFO     | sum of deviations: -8373086005.0
[2026-02-07 21:15:50] 2026-02-08 02:15:12,909 | INFO     | mean x: 1770512886.0
[2026-02-07 21:15:50] 2026-02-08 02:15:12,909 | INFO     | mean y: 2530647.526717557
[2026-02-07 21:15:50] 2026-02-08 02:15:12,909 | INFO     | intersect: 21270089385.60029
[2026-02-07 21:15:50] 2026-02-08 02:15:12,909 | INFO     | chi2: 0.09620598748100508
[2026-02-07 21:15:50] 2026-02-08 02:15:12,909 | INFO     | current chi2=0.09620598748100508 (change=93.75825637655163 %)
[2026-02-07 21:15:50] 2026-02-08 02:15:12,910 | INFO     | sum of square deviations: 620244187.5
[2026-02-07 21:15:50] 2026-02-08 02:15:12,910 | INFO     | sum of deviations: -6942581531.999998
[2026-02-07 21:15:50] 2026-02-08 02:15:12,910 | INFO     | mean x: 1770513038.5
[2026-02-07 21:15:50] 2026-02-08 02:15:12,910 | INFO     | mean y: 2527688.5555555555
[2026-02-07 21:15:50] 2026-02-08 02:15:12,911 | INFO     | intersect: 19820417756.65926
[2026-02-07 21:15:50] 2026-02-08 02:15:12,911 | INFO     | chi2: 0.07802056805961466
[2026-02-07 21:15:50] 2026-02-08 02:15:12,911 | INFO     | current chi2=0.07802056805961466 (change=18.902585896725967 %)
[2026-02-07 21:15:50] 2026-02-08 02:15:12,911 | INFO     | left removable region: 20
[2026-02-07 21:15:50] 2026-02-08 02:15:12,911 | INFO     | sum of square deviations: 412686807.5
[2026-02-07 21:15:50] 2026-02-08 02:15:12,912 | INFO     | sum of deviations: 1301204419.9999998
[2026-02-07 21:15:50] 2026-02-08 02:15:12,912 | INFO     | mean x: 1770513160.5
[2026-02-07 21:15:50] 2026-02-08 02:15:12,912 | INFO     | mean y: 2508620.5636363635
[2026-02-07 21:15:50] 2026-02-08 02:15:12,912 | INFO     | intersect: -5579931884.542088
[2026-02-07 21:15:50] 2026-02-08 02:15:12,912 | INFO     | chi2: 0.00021118320978863141
[2026-02-07 21:15:50] 2026-02-08 02:15:12,913 | INFO     | current memory leak: 3.15 B/s (using 110 data points, chi2=0.00)
[2026-02-07 21:15:50] 2026-02-08 02:15:12,913 | INFO     | could have reported an average CPU frequency of 1712 MHz (8 samples)
[2026-02-07 21:15:50] 2026-02-08 02:15:12,913 | INFO     | ..............................
[2026-02-07 21:15:50] 2026-02-08 02:15:12,913 | INFO     | . Timing measurements:
[2026-02-07 21:15:50] 2026-02-08 02:15:12,913 | INFO     | . get job = 0 s
[2026-02-07 21:15:50] 2026-02-08 02:15:12,914 | INFO     | . initial setup = 8 s
[2026-02-07 21:15:50] 2026-02-08 02:15:12,914 | INFO     | . payload setup = 8 s
[2026-02-07 21:15:50] 2026-02-08 02:15:12,914 | INFO     | . stage-in = 0 s
[2026-02-07 21:15:50] 2026-02-08 02:15:12,914 | INFO     | . payload execution = 8294 s
[2026-02-07 21:15:50] 2026-02-08 02:15:12,914 | INFO     | . stage-out = 0 s
[2026-02-07 21:15:50] 2026-02-08 02:15:12,914 | INFO     | . log creation = 0 s
[2026-02-07 21:15:50] 2026-02-08 02:15:12,914 | INFO     | ..............................
[2026-02-07 21:15:50] 2026-02-08 02:15:12,998 | INFO     | 
[2026-02-07 21:15:50] 2026-02-08 02:15:12,999 | INFO     | job summary report
[2026-02-07 21:15:50] 2026-02-08 02:15:12,999 | INFO     | --------------------------------------------------
[2026-02-07 21:15:50] 2026-02-08 02:15:12,999 | INFO     | PanDA job id: 7000875215
[2026-02-07 21:15:50] 2026-02-08 02:15:12,999 | INFO     | task id: 48318042
[2026-02-07 21:15:50] 2026-02-08 02:15:12,999 | INFO     | errors: (none)
[2026-02-07 21:15:50] 2026-02-08 02:15:13,000 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 21:15:50] 2026-02-08 02:15:13,000 | INFO     | pilot state: finished 
[2026-02-07 21:15:50] 2026-02-08 02:15:13,000 | INFO     | transexitcode: 0
[2026-02-07 21:15:50] 2026-02-08 02:15:13,000 | INFO     | exeerrorcode: 0
[2026-02-07 21:15:50] 2026-02-08 02:15:13,000 | INFO     | exeerrordiag: 
[2026-02-07 21:15:50] 2026-02-08 02:15:13,000 | INFO     | exitcode: 0
[2026-02-07 21:15:50] 2026-02-08 02:15:13,001 | INFO     | exitmsg: OK
[2026-02-07 21:15:50] 2026-02-08 02:15:13,001 | INFO     | cpuconsumptiontime: 62379 s
[2026-02-07 21:15:50] 2026-02-08 02:15:13,001 | INFO     | nevents: 400
[2026-02-07 21:15:50] 2026-02-08 02:15:13,001 | INFO     | neventsw: 0
[2026-02-07 21:15:50] 2026-02-08 02:15:13,001 | INFO     | pid: 12420
[2026-02-07 21:15:50] 2026-02-08 02:15:13,001 | INFO     | pgrp: 12420
[2026-02-07 21:15:50] 2026-02-08 02:15:13,002 | INFO     | corecount: 8
[2026-02-07 21:15:50] 2026-02-08 02:15:13,002 | INFO     | event service: False
[2026-02-07 21:15:50] 2026-02-08 02:15:13,002 | INFO     | sizes: {0: 2282900, 1: 2283134, 11: 2283134, 8306: 2310878, 8307: 2310877, 8308: 2319931, 8309: 2320115, 8311: 2320309}
[2026-02-07 21:15:50] 2026-02-08 02:15:13,002 | INFO     | --------------------------------------------------
[2026-02-07 21:15:50] 2026-02-08 02:15:13,002 | INFO     | 
[2026-02-07 21:15:50] 2026-02-08 02:15:13,003 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 21:15:50] 2026-02-08 02:15:13,033 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,034 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,034 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,034 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,034 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,037 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 21:15:50] 2026-02-08 02:15:13,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,037 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 21:15:50] 2026-02-08 02:15:13,037 | INFO     | job 7000875215 has completed (purged errors)
[2026-02-07 21:15:50] 2026-02-08 02:15:13,037 | INFO     | overall cleanup function is called
[2026-02-07 21:15:50] 2026-02-08 02:15:14,046 | INFO     | --- collectZombieJob: --- 10, [12420]
[2026-02-07 21:15:50] 2026-02-08 02:15:14,046 | INFO     | zombie collector waiting for pid 12420
[2026-02-07 21:15:50] 2026-02-08 02:15:14,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 21:15:50] 2026-02-08 02:15:14,047 | INFO     | collected zombie processes
[2026-02-07 21:15:50] 2026-02-08 02:15:14,047 | INFO     | will attempt to kill all subprocesses of pid=12420
[2026-02-07 21:15:50] 2026-02-08 02:15:14,134 | INFO     | process IDs to be killed: [12420] (in reverse order)
[2026-02-07 21:15:50] 2026-02-08 02:15:14,194 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 21:15:50] 2026-02-08 02:15:14,194 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 21:15:50] 2026-02-08 02:15:14,199 | INFO     | did not find any defunct processes belonging to 12420
[2026-02-07 21:15:50] 2026-02-08 02:15:14,201 | INFO     | did not find any defunct processes belonging to 12420
[2026-02-07 21:15:50] 2026-02-08 02:15:14,202 | INFO     | ready for new job
[2026-02-07 21:15:50] 2026-02-08 02:15:14,202 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 21:15:50] 2026-02-08 02:15:14,203 | INFO     | **************************************
[2026-02-07 21:15:50] 2026-02-08 02:15:14,204 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 21:15:50] 2026-02-08 02:15:14,204 | INFO     | **************************************
[2026-02-07 21:15:50] 2026-02-08 02:15:14,204 | INFO     | 
[2026-02-07 21:15:50] 2026-02-08 02:15:14,204 | INFO     | architecture information:
[2026-02-07 21:15:50] 2026-02-08 02:15:14,205 | INFO     | executing command: cat /etc/os-release
[2026-02-07 21:15:50] 2026-02-08 02:15:14,225 | INFO     | cat /etc/os-release:
[2026-02-07 21:15:50] NAME="CentOS Linux"
[2026-02-07 21:15:50] VERSION="7 (Core)"
[2026-02-07 21:15:50] ID="centos"
[2026-02-07 21:15:50] ID_LIKE="rhel fedora"
[2026-02-07 21:15:50] VERSION_ID="7"
[2026-02-07 21:15:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 21:15:50] ANSI_COLOR="0;31"
[2026-02-07 21:15:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 21:15:50] HOME_URL="https://www.centos.org/"
[2026-02-07 21:15:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 21:15:50] 
[2026-02-07 21:15:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 21:15:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 21:15:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 21:15:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 21:15:50] 
[2026-02-07 21:15:50] 2026-02-08 02:15:14,225 | INFO     | **************************************
[2026-02-07 21:15:50] 2026-02-08 02:15:14,728 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 21:15:50] 2026-02-08 02:15:14,748 | INFO     | sufficient remaining disk space (18018729984 B)
[2026-02-07 21:15:50] 2026-02-08 02:15:14,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 21:15:50] 2026-02-08 02:15:14,749 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 21:15:50] 2026-02-08 02:15:14,749 | INFO     | update_server=False
[2026-02-07 21:15:50] 2026-02-08 02:15:14,749 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 21:15:50] 2026-02-08 02:15:14,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 21:15:50] 2026-02-08 02:15:14,910 | INFO     | all data control threads have been joined
[2026-02-07 21:15:50] 2026-02-08 02:15:14,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 21:15:50] 2026-02-08 02:15:15,000 | WARNING  | process 12420 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 21:15:50] 2026-02-08 02:15:15,076 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 21:15:50] 2026-02-08 02:15:15,078 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 21:15:50] 2026-02-08 02:15:15,079 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-07 21:15:50] 2026-02-08 02:15:15,079 | WARNING  | maxPSS not found in memory monitor output
[2026-02-07 21:15:50] 2026-02-08 02:15:15,079 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7000875215/payload.stdout) since it has not been created yet
[2026-02-07 21:15:50] 2026-02-08 02:15:15,080 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 21:15:50] 2026-02-08 02:15:15,100 | INFO     | sufficient remaining disk space (18018729984 B)
[2026-02-07 21:15:50] 2026-02-08 02:15:15,101 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-07 21:15:50] 2026-02-08 02:15:15,101 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7000875215/HITS.48318042._012111.pool.root.1 since it does not exist
[2026-02-07 21:15:50] 2026-02-08 02:15:15,196 | INFO     | number of running child processes to parent process 12420: 1
[2026-02-07 21:15:50] 2026-02-08 02:15:15,196 | INFO     | maximum number of monitored processes: 6
[2026-02-07 21:15:50] 2026-02-08 02:15:15,196 | INFO     | aborting job monitoring since job object (job id=7000875215) has expired
[2026-02-07 21:15:50] 2026-02-08 02:15:15,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 21:15:50] 2026-02-08 02:15:15,196 | INFO     | will abort loop
[2026-02-07 21:15:50] 2026-02-08 02:15:15,520 | INFO     | all payload control threads have been joined
[2026-02-07 21:15:50] 2026-02-08 02:15:15,755 | INFO     | [job] retrieve thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:15,756 | INFO     | [job] queue monitor thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:15,826 | INFO     | [payload] failed_post thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:15,827 | INFO     | [payload] validate_post thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:15,916 | INFO     | [data] control thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:16,080 | INFO     | all job control threads have been joined
[2026-02-07 21:15:50] 2026-02-08 02:15:16,202 | INFO     | [job] job monitor thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:16,525 | INFO     | [payload] control thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:16,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 21:15:50] 2026-02-08 02:15:16,787 | INFO     | [job] validate thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:16,817 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:16,893 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:16,895 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:16,933 | INFO     | [data] copytool_out thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:17,086 | INFO     | [job] control thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:17,122 | INFO     | [data] copytool_in thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:20,634 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:25,199 | INFO     | job.realtimelogging is not enabled
[2026-02-07 21:15:50] 2026-02-08 02:15:26,204 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 21:15:50] 2026-02-08 02:15:43,710 | INFO     | [monitor] cgroup control has ended
[2026-02-07 21:15:50] 2026-02-08 02:15:44,528 | INFO     | PID=8037 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-07 21:15:50] 2026-02-08 02:15:44,529 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 21:15:50] 2026-02-08 02:15:44,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 21:15:50] 2026-02-08 02:15:44,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 21:15:50] 2026-02-08 02:15:44,943 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140476878526272)>', '<ExcThread(monitor, started 140476149651200)>']
[2026-02-07 21:15:50] 2026-02-08 02:15:45,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 21:15:50] 2026-02-08 02:15:45,534 | INFO     | [monitor] control thread has ended
[2026-02-07 21:15:50] 2026-02-08 02:15:49,945 | INFO     | all workflow threads have been joined
[2026-02-07 21:15:50] 2026-02-08 02:15:49,945 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 21:15:50] 2026-02-08 02:15:49,945 | INFO     | traces error code: 0
[2026-02-07 21:15:50] 2026-02-08 02:15:49,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 21:15:50] 2026-02-08 02:15:50,065 [wrapper] ==== pilot stdout END ====
[2026-02-07 21:15:50] 2026-02-08 02:15:50,069 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 21:15:50] 2026-02-08 02:15:50,074 [wrapper] pilotpid: 8037
[2026-02-07 21:15:50] 2026-02-08 02:15:50,078 [wrapper] Pilot exit status: 0
[2026-02-07 21:15:50] 2026-02-08 02:15:50,096 [wrapper] pandaids: 7000875215
[2026-02-07 21:15:50] 2026-02-08 02:15:50,141 [wrapper] cleanup supervisor_pilot 31581 8038
[2026-02-07 21:15:50] 2026-02-08 02:15:50,146 [wrapper] Test setup, not cleaning
[2026-02-07 21:15:50] 2026-02-08 02:15:50,151 [wrapper] apfmon messages muted
[2026-02-07 21:15:50] 2026-02-08 02:15:50,156 [wrapper] ==== wrapper stdout END ====
[2026-02-07 21:15:50] 2026-02-08 02:15:50,161 [wrapper] ==== wrapper stderr END ====
[2026-02-07 21:15:50]  *** Error codes and diagnostics ***
[2026-02-07 21:15:50]     "exeErrorCode": 0,
[2026-02-07 21:15:50]     "exeErrorDiag": "",
[2026-02-07 21:15:50]     "pilotErrorCode": 0,
[2026-02-07 21:15:50]     "pilotErrorDiag": "",
[2026-02-07 21:15:50]  *** Listing of results directory ***
[2026-02-07 21:15:50] total 672560
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas    584627 Feb  7 13:32 pilot3.tar.gz
[2026-02-07 21:15:50] -rwx------ 1 boincer umatlas     36322 Feb  7 13:33 runpilot2-wrapper.sh
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas      5111 Feb  7 13:35 queuedata.json
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas       100 Feb  7 18:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 21:15:50] -rwxr-xr-x 1 boincer umatlas      7986 Feb  7 18:56 run_atlas
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas       105 Feb  7 18:56 job.xml
[2026-02-07 21:15:50] -rw-r--r-- 2 boincer umatlas 497454922 Feb  7 18:56 EVNT.48318040._000232.pool.root.1
[2026-02-07 21:15:50] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 18:56 start_atlas.sh
[2026-02-07 21:15:50] drwxrwx--x 2 boincer umatlas      4096 Feb  7 18:56 shared
[2026-02-07 21:15:50] -rw-r--r-- 2 boincer umatlas    597953 Feb  7 18:56 input.tar.gz
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas         0 Feb  7 18:56 boinc_lockfile
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas      2538 Feb  7 18:56 pandaJob.out
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas        57 Feb  7 18:56 setup.sh.local
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas   1009502 Feb  7 18:56 agis_schedconf.cvmfs.json
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas   1513088 Feb  7 18:56 agis_ddmendpoints.agis.ALL.json
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas       433 Feb  7 18:56 workernode_map.json
[2026-02-07 21:15:50] drwx------ 5 boincer umatlas      4096 Feb  7 18:56 pilot3
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas      5908 Feb  7 21:12 init_data.xml
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas 184143076 Feb  7 21:14 HITS.48318042._012111.pool.root.1
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas       530 Feb  7 21:14 boinc_task_state.xml
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas      1046 Feb  7 21:15 memory_monitor_summary.json
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas    414408 Feb  7 21:15 log.48318042._012111.job.log.tgz.1
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas      6394 Feb  7 21:15 heartbeat.json
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas        95 Feb  7 21:15 pilot_heartbeat.json
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas      8192 Feb  7 21:15 boinc_mmap_file
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas        27 Feb  7 21:15 wrapper_checkpoint.txt
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas      6294 Feb  7 21:15 pilotlog.txt
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas   1169626 Feb  7 21:15 log.48318042._012111.job.log.1
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas       357 Feb  7 21:15 output.list
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas       620 Feb  7 21:15 runtime_log
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas   1597440 Feb  7 21:15 result.tar.gz
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas      9341 Feb  7 21:15 runtime_log.err
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas       659 Feb  7 21:15 3NJLDm5I288nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAqbKDmhVPiYn.diag
[2026-02-07 21:15:50] -rw-r--r-- 1 boincer umatlas     21429 Feb  7 21:15 stderr.txt
[2026-02-07 21:15:50] HITS file was successfully produced:
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas 184143076 Feb  7 21:14 shared/HITS.pool.root.1
[2026-02-07 21:15:50]  *** Contents of shared directory: ***
[2026-02-07 21:15:50] total 667788
[2026-02-07 21:15:50] -rw-r--r-- 2 boincer umatlas 497454922 Feb  7 18:56 ATLAS.root_0
[2026-02-07 21:15:50] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 18:56 start_atlas.sh
[2026-02-07 21:15:50] -rw-r--r-- 2 boincer umatlas    597953 Feb  7 18:56 input.tar.gz
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas 184143076 Feb  7 21:14 HITS.pool.root.1
[2026-02-07 21:15:50] -rw------- 1 boincer umatlas   1597440 Feb  7 21:15 result.tar.gz
21:15:52 (4225): run_atlas exited; CPU time 62333.389805
21:15:52 (4225): called boinc_finish(0)

</stderr_txt>
]]>

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