Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:08:50 (14864): wrapper (7.7.26015): starting
11:08:50 (14864): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 11:08:50] Arguments: --nthreads 8
[2026-02-08 11:08:50] Threads: 8
[2026-02-08 11:08:50] Checking for CVMFS
[2026-02-08 11:08:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 11:08:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 11:08:53] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 11:08:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 11:08:55] 2.11.2.0 4021 78458 104616 156014 2 54 21337173 25165824 4780 130560 0 31936811 99.852 24425699 3337 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-08 11:08:55] CVMFS is ok
[2026-02-08 11:08:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 11:08:55] Checking for apptainer binary...
[2026-02-08 11:08:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 11:08:55] Running /usr/bin/apptainer --version
[2026-02-08 11:08:55] apptainer version 1.3.2-1.el7
[2026-02-08 11:08:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 11:09:02] cg-vwn448.simple-grid.lan
[2026-02-08 11:09:02] apptainer works
[2026-02-08 11:09:02] Set ATHENA_PROC_NUMBER=8
[2026-02-08 11:09:02] Set ATHENA_CORE_NUMBER=8
[2026-02-08 11:09:02] Starting ATLAS job with PandaID=7000875480
[2026-02-08 11:09:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 16:55:18]  *** The last 200 lines of the pilot log: ***
[2026-02-08 16:55:18] 2026-02-08 15:54:42,526 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-7000875480/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 16:55:18] 2026-02-08 15:54:42,527 | INFO     | extracted standard info from prmon json
[2026-02-08 16:55:18] 2026-02-08 15:54:42,527 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 16:55:18] 2026-02-08 15:54:42,527 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 16:55:18] 2026-02-08 15:54:42,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 16:55:18] 2026-02-08 15:54:42,528 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 16:55:18] 2026-02-08 15:54:42,534 | INFO     | fitting pss+swap vs Time
[2026-02-08 16:55:18] 2026-02-08 15:54:42,535 | INFO     | sum of square deviations: 11244973630.0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,539 | INFO     | sum of deviations: 51652574964.000046
[2026-02-08 16:55:18] 2026-02-08 15:54:42,539 | INFO     | mean x: 1770555991.0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,539 | INFO     | mean y: 2531083.3595166164
[2026-02-08 16:55:18] 2026-02-08 15:54:42,539 | INFO     | intersect: -8130327121.759004
[2026-02-08 16:55:18] 2026-02-08 15:54:42,540 | INFO     | chi2: 5.812744648646836
[2026-02-08 16:55:18] 2026-02-08 15:54:42,545 | INFO     | sum of square deviations: 10743038637.5
[2026-02-08 16:55:18] 2026-02-08 15:54:42,548 | INFO     | sum of deviations: 72858142549.49997
[2026-02-08 16:55:18] 2026-02-08 15:54:42,549 | INFO     | mean x: 1770555838.5
[2026-02-08 16:55:18] 2026-02-08 15:54:42,549 | INFO     | mean y: 2537442.8680981593
[2026-02-08 16:55:18] 2026-02-08 15:54:42,549 | INFO     | intersect: -12005183466.0927
[2026-02-08 16:55:18] 2026-02-08 15:54:42,549 | INFO     | chi2: 5.072167315300557
[2026-02-08 16:55:18] 2026-02-08 15:54:42,550 | INFO     | current chi2=5.072167315300557 (change=12.740579160288426 %)
[2026-02-08 16:55:18] 2026-02-08 15:54:42,550 | INFO     | right removable region: 325
[2026-02-08 16:55:18] 2026-02-08 15:54:42,550 | INFO     | sum of square deviations: 10743038637.5
[2026-02-08 16:55:18] 2026-02-08 15:54:42,554 | INFO     | sum of deviations: -61963385108.49999
[2026-02-08 16:55:18] 2026-02-08 15:54:42,554 | INFO     | mean x: 1770556143.5
[2026-02-08 16:55:18] 2026-02-08 15:54:42,554 | INFO     | mean y: 2565573.13803681
[2026-02-08 16:55:18] 2026-02-08 15:54:42,554 | INFO     | intersect: 10214727688.329077
[2026-02-08 16:55:18] 2026-02-08 15:54:42,555 | INFO     | chi2: 1.552414603162
[2026-02-08 16:55:18] 2026-02-08 15:54:42,555 | INFO     | current chi2=1.552414603162 (change=73.29291587712544 %)
[2026-02-08 16:55:18] 2026-02-08 15:54:42,556 | INFO     | sum of square deviations: 10256266720.0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,559 | INFO     | sum of deviations: -93349623761.00003
[2026-02-08 16:55:18] 2026-02-08 15:54:42,560 | INFO     | mean x: 1770556296.0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,560 | INFO     | mean y: 2575347.526479751
[2026-02-08 16:55:18] 2026-02-08 15:54:42,560 | INFO     | intersect: 16117675372.85712
[2026-02-08 16:55:18] 2026-02-08 15:54:42,561 | INFO     | chi2: 1.0268392766053127
[2026-02-08 16:55:18] 2026-02-08 15:54:42,561 | INFO     | current chi2=1.0268392766053127 (change=33.85534543968997 %)
[2026-02-08 16:55:18] 2026-02-08 15:54:42,561 | INFO     | sum of square deviations: 9784425315.0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,565 | INFO     | sum of deviations: -88856367207.49998
[2026-02-08 16:55:18] 2026-02-08 15:54:42,565 | INFO     | mean x: 1770556448.5
[2026-02-08 16:55:18] 2026-02-08 15:54:42,565 | INFO     | mean y: 2573881.9778481014
[2026-02-08 16:55:18] 2026-02-08 15:54:42,565 | INFO     | intersect: 16081720984.090816
[2026-02-08 16:55:18] 2026-02-08 15:54:42,566 | INFO     | chi2: 1.0158355221196296
[2026-02-08 16:55:18] 2026-02-08 15:54:42,566 | INFO     | current chi2=1.0158355221196296 (change=1.0716141012896472 %)
[2026-02-08 16:55:18] 2026-02-08 15:54:42,566 | INFO     | left removable region: 30
[2026-02-08 16:55:18] 2026-02-08 15:54:42,567 | INFO     | sum of square deviations: 7960484140.0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,574 | INFO     | sum of deviations: -36811826220.99999
[2026-02-08 16:55:18] 2026-02-08 15:54:42,574 | INFO     | mean x: 1770556723.0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,574 | INFO     | mean y: 2570657.745762712
[2026-02-08 16:55:18] 2026-02-08 15:54:42,575 | INFO     | intersect: 8190191568.136675
[2026-02-08 16:55:18] 2026-02-08 15:54:42,575 | INFO     | chi2: 0.17303052223139967
[2026-02-08 16:55:18] 2026-02-08 15:54:42,575 | INFO     | current memory leak: -4.62 B/s (using 295 data points, chi2=0.17)
[2026-02-08 16:55:18] 2026-02-08 15:54:42,576 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-02-08 16:55:18] 2026-02-08 15:54:42,576 | INFO     | ..............................
[2026-02-08 16:55:18] 2026-02-08 15:54:42,577 | INFO     | . Timing measurements:
[2026-02-08 16:55:18] 2026-02-08 15:54:42,577 | INFO     | . get job = 0 s
[2026-02-08 16:55:18] 2026-02-08 15:54:42,577 | INFO     | . initial setup = 97 s
[2026-02-08 16:55:18] 2026-02-08 15:54:42,577 | INFO     | . payload setup = 138 s
[2026-02-08 16:55:18] 2026-02-08 15:54:42,577 | INFO     | . stage-in = 0 s
[2026-02-08 16:55:18] 2026-02-08 15:54:42,577 | INFO     | . payload execution = 20264 s
[2026-02-08 16:55:18] 2026-02-08 15:54:42,577 | INFO     | . stage-out = 4 s
[2026-02-08 16:55:18] 2026-02-08 15:54:42,577 | INFO     | . log creation = 1 s
[2026-02-08 16:55:18] 2026-02-08 15:54:42,577 | INFO     | ..............................
[2026-02-08 16:55:18] 2026-02-08 15:54:42,758 | INFO     | 
[2026-02-08 16:55:18] 2026-02-08 15:54:42,758 | INFO     | job summary report
[2026-02-08 16:55:18] 2026-02-08 15:54:42,758 | INFO     | --------------------------------------------------
[2026-02-08 16:55:18] 2026-02-08 15:54:42,758 | INFO     | PanDA job id: 7000875480
[2026-02-08 16:55:18] 2026-02-08 15:54:42,758 | INFO     | task id: 48431113
[2026-02-08 16:55:18] 2026-02-08 15:54:42,758 | INFO     | errors: (none)
[2026-02-08 16:55:18] 2026-02-08 15:54:42,758 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 16:55:18] 2026-02-08 15:54:42,758 | INFO     | pilot state: finished 
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | transexitcode: 0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | exeerrorcode: 0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | exeerrordiag: 
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | exitcode: 0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | exitmsg: OK
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | cpuconsumptiontime: 79626 s
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | nevents: 400
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | neventsw: 0
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | pid: 23464
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | pgrp: 23464
[2026-02-08 16:55:18] 2026-02-08 15:54:42,759 | INFO     | corecount: 8
[2026-02-08 16:55:18] 2026-02-08 15:54:42,760 | INFO     | event service: False
[2026-02-08 16:55:18] 2026-02-08 15:54:42,760 | INFO     | sizes: {0: 2282629, 1: 2283086, 2: 2283146, 12: 2283174, 20407: 2316603, 20412: 2325603, 20413: 2325787, 20415: 2325981}
[2026-02-08 16:55:18] 2026-02-08 15:54:42,760 | INFO     | --------------------------------------------------
[2026-02-08 16:55:18] 2026-02-08 15:54:42,760 | INFO     | 
[2026-02-08 16:55:18] 2026-02-08 15:54:42,760 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-02-08 16:55:18] 2026-02-08 15:54:43,178 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,178 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,178 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,180 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,180 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,180 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 16:55:18] 2026-02-08 15:54:43,180 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,180 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 16:55:18] 2026-02-08 15:54:43,180 | INFO     | job 7000875480 has completed (purged errors)
[2026-02-08 16:55:18] 2026-02-08 15:54:43,180 | INFO     | overall cleanup function is called
[2026-02-08 16:55:18] 2026-02-08 15:54:44,194 | INFO     | --- collectZombieJob: --- 10, [23464]
[2026-02-08 16:55:18] 2026-02-08 15:54:44,194 | INFO     | zombie collector waiting for pid 23464
[2026-02-08 16:55:18] 2026-02-08 15:54:44,194 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 16:55:18] 2026-02-08 15:54:44,194 | INFO     | collected zombie processes
[2026-02-08 16:55:18] 2026-02-08 15:54:44,194 | INFO     | will attempt to kill all subprocesses of pid=23464
[2026-02-08 16:55:18] 2026-02-08 15:54:44,297 | INFO     | process IDs to be killed: [23464] (in reverse order)
[2026-02-08 16:55:18] 2026-02-08 15:54:45,007 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 16:55:18] 2026-02-08 15:54:45,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 16:55:18] 2026-02-08 15:54:45,010 | INFO     | did not find any defunct processes belonging to 23464
[2026-02-08 16:55:18] 2026-02-08 15:54:45,013 | INFO     | did not find any defunct processes belonging to 23464
[2026-02-08 16:55:18] 2026-02-08 15:54:45,013 | INFO     | ready for new job
[2026-02-08 16:55:18] 2026-02-08 15:54:45,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 16:55:18] 2026-02-08 15:54:45,015 | INFO     | **************************************
[2026-02-08 16:55:18] 2026-02-08 15:54:45,015 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 16:55:18] 2026-02-08 15:54:45,016 | INFO     | **************************************
[2026-02-08 16:55:18] 2026-02-08 15:54:45,016 | INFO     | 
[2026-02-08 16:55:18] 2026-02-08 15:54:45,016 | INFO     | pilot is running in a VM
[2026-02-08 16:55:18] 2026-02-08 15:54:45,016 | INFO     | architecture information:
[2026-02-08 16:55:18] 2026-02-08 15:54:45,027 | INFO     | executing command: cat /etc/os-release
[2026-02-08 16:55:18] 2026-02-08 15:54:45,201 | INFO     | cat /etc/os-release:
[2026-02-08 16:55:18] NAME="CentOS Linux"
[2026-02-08 16:55:18] VERSION="7 (Core)"
[2026-02-08 16:55:18] ID="centos"
[2026-02-08 16:55:18] ID_LIKE="rhel fedora"
[2026-02-08 16:55:18] VERSION_ID="7"
[2026-02-08 16:55:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 16:55:18] ANSI_COLOR="0;31"
[2026-02-08 16:55:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 16:55:18] HOME_URL="https://www.centos.org/"
[2026-02-08 16:55:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 16:55:18] 
[2026-02-08 16:55:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 16:55:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 16:55:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 16:55:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 16:55:18] 
[2026-02-08 16:55:18] 2026-02-08 15:54:45,201 | INFO     | **************************************
[2026-02-08 16:55:18] 2026-02-08 15:54:45,705 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-02-08 16:55:18] 2026-02-08 15:54:45,902 | INFO     | sufficient remaining disk space (495224619008 B)
[2026-02-08 16:55:18] 2026-02-08 15:54:45,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 16:55:18] 2026-02-08 15:54:45,903 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 16:55:18] 2026-02-08 15:54:45,903 | INFO     | update_server=False
[2026-02-08 16:55:18] 2026-02-08 15:54:45,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 16:55:18] 2026-02-08 15:54:45,905 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 16:55:18] 2026-02-08 15:54:46,280 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 16:55:18] 2026-02-08 15:54:46,280 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 16:55:18] 2026-02-08 15:54:46,280 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 16:55:18] 2026-02-08 15:54:46,280 | INFO     | will abort loop
[2026-02-08 16:55:18] 2026-02-08 15:54:46,413 | INFO     | all data control threads have been joined
[2026-02-08 16:55:18] 2026-02-08 15:54:46,420 | INFO     | all job control threads have been joined
[2026-02-08 16:55:18] 2026-02-08 15:54:46,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 16:55:18] 2026-02-08 15:54:46,910 | INFO     | [job] retrieve thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:46,961 | INFO     | all payload control threads have been joined
[2026-02-08 16:55:18] 2026-02-08 15:54:47,070 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:47,286 | INFO     | [job] job monitor thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:47,324 | INFO     | [payload] validate_post thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:47,419 | INFO     | [data] control thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:47,423 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:47,426 | INFO     | [job] control thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:47,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 16:55:18] 2026-02-08 15:54:47,912 | INFO     | [data] copytool_out thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:47,951 | INFO     | [payload] failed_post thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:47,967 | INFO     | [payload] control thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:48,027 | INFO     | [job] validate thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:48,036 | INFO     | [data] copytool_in thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:48,036 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:48,181 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:48,778 | INFO     | [job] queue monitor thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:49,929 | INFO     | [monitor] cgroup control has ended
[2026-02-08 16:55:18] 2026-02-08 15:54:50,728 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 16:55:18] 2026-02-08 15:54:51,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681564473152)>', '<ExcThread(monitor, started 140680907187968)>']
[2026-02-08 16:55:18] 2026-02-08 15:54:56,137 | INFO     | all workflow threads have been joined
[2026-02-08 16:55:18] 2026-02-08 15:54:56,137 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 16:55:18] 2026-02-08 15:54:56,137 | INFO     | traces error code: 0
[2026-02-08 16:55:18] 2026-02-08 15:54:56,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 16:55:18] 2026-02-08 15:55:14,958 | INFO     | PID=18954 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-08 16:55:18] 2026-02-08 15:55:14,958 | INFO     | .. there are 9 such processes running
[2026-02-08 16:55:18] 2026-02-08 15:55:14,959 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 16:55:18] 2026-02-08 15:55:14,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 16:55:18] 2026-02-08 15:55:14,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 16:55:18] 2026-02-08 15:55:14,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 16:55:18] 2026-02-08 15:55:14,962 | CRITICAL | thread 'MainThread' is not alive
[2026-02-08 16:55:18] 2026-02-08 15:55:14,962 | INFO     | [monitor] control thread has ended
[2026-02-08 16:55:18] 2026-02-08 15:55:15,374 [wrapper] ==== pilot stdout END ====
[2026-02-08 16:55:18] 2026-02-08 15:55:15,451 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 16:55:18] 2026-02-08 15:55:15,535 [wrapper] pilotpid: 18954
[2026-02-08 16:55:18] 2026-02-08 15:55:15,644 [wrapper] Pilot exit status: 0
[2026-02-08 16:55:18] 2026-02-08 15:55:15,928 [wrapper] pandaids: 7000875480
[2026-02-08 16:55:18] 2026-02-08 15:55:16,232 [wrapper] cleanup supervisor_pilot   398 18955
[2026-02-08 16:55:18] 2026-02-08 15:55:16,244 [wrapper] Test setup, not cleaning
[2026-02-08 16:55:18] 2026-02-08 15:55:16,261 [wrapper] apfmon messages muted
[2026-02-08 16:55:18] 2026-02-08 15:55:16,280 [wrapper] ==== wrapper stdout END ====
[2026-02-08 16:55:18] 2026-02-08 15:55:16,295 [wrapper] ==== wrapper stderr END ====
[2026-02-08 16:55:18]  *** Error codes and diagnostics ***
[2026-02-08 16:55:18]     "exeErrorCode": 0,
[2026-02-08 16:55:18]     "exeErrorDiag": "",
[2026-02-08 16:55:18]     "pilotErrorCode": 0,
[2026-02-08 16:55:18]     "pilotErrorDiag": "",
[2026-02-08 16:55:18]  *** Listing of results directory ***
[2026-02-08 16:55:18] total 900644
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc    584627 Feb  7 19:32 pilot3.tar.gz
[2026-02-08 16:55:18] -rwx------. 1 boinc boinc     36322 Feb  7 19:34 runpilot2-wrapper.sh
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc      5111 Feb  7 19:37 queuedata.json
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc       100 Feb  8 11:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 16:55:18] -rwxr-xr-x. 1 boinc boinc      7986 Feb  8 11:08 run_atlas
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc       105 Feb  8 11:08 job.xml
[2026-02-08 16:55:18] -rw-r--r--. 2 boinc boinc    597950 Feb  8 11:08 input.tar.gz
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc      6392 Feb  8 11:08 init_data.xml
[2026-02-08 16:55:18] -rw-r--r--. 2 boinc boinc 656134625 Feb  8 11:08 EVNT.48431111._000122.pool.root.1
[2026-02-08 16:55:18] -rw-r--r--. 2 boinc boinc     15845 Feb  8 11:08 start_atlas.sh
[2026-02-08 16:55:18] drwxrwx--x. 2 boinc boinc        68 Feb  8 11:08 shared
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc         0 Feb  8 11:08 boinc_lockfile
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc      2544 Feb  8 11:09 pandaJob.out
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc       415 Feb  8 11:14 workernode_map.json
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc   1009518 Feb  8 11:14 agis_schedconf.cvmfs.json
[2026-02-08 16:55:18] drwx------. 5 boinc boinc      4096 Feb  8 11:14 pilot3
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc 255472171 Feb  8 16:53 HITS.48431113._006134.pool.root.1
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc       531 Feb  8 16:53 boinc_task_state.xml
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc      1010 Feb  8 16:54 memory_monitor_summary.json
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc   1513088 Feb  8 16:54 agis_ddmendpoints.agis.ALL.json
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc    533447 Feb  8 16:54 log.48431113._006134.job.log.tgz.1
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc      6313 Feb  8 16:54 heartbeat.json
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc      8192 Feb  8 16:54 boinc_mmap_file
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc        28 Feb  8 16:54 wrapper_checkpoint.txt
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc        95 Feb  8 16:55 pilot_heartbeat.json
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc       890 Feb  8 16:55 pilotlog.txt
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc   2831156 Feb  8 16:55 log.48431113._006134.job.log.1
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc       357 Feb  8 16:55 output.list
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc       620 Feb  8 16:55 runtime_log
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc   3379200 Feb  8 16:55 result.tar.gz
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc      8832 Feb  8 16:55 runtime_log.err
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc       656 Feb  8 16:55 jlOLDmfJ288nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmotbKDmfLRgln.diag
[2026-02-08 16:55:18] -rw-r--r--. 1 boinc boinc     20716 Feb  8 16:55 stderr.txt
[2026-02-08 16:55:18] HITS file was successfully produced:
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc 255472171 Feb  8 16:53 shared/HITS.pool.root.1
[2026-02-08 16:55:18]  *** Contents of shared directory: ***
[2026-02-08 16:55:18] total 894148
[2026-02-08 16:55:18] -rw-r--r--. 2 boinc boinc    597950 Feb  8 11:08 input.tar.gz
[2026-02-08 16:55:18] -rw-r--r--. 2 boinc boinc 656134625 Feb  8 11:08 ATLAS.root_0
[2026-02-08 16:55:18] -rw-r--r--. 2 boinc boinc     15845 Feb  8 11:08 start_atlas.sh
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc 255472171 Feb  8 16:53 HITS.pool.root.1
[2026-02-08 16:55:18] -rw-------. 1 boinc boinc   3379200 Feb  8 16:55 result.tar.gz
16:55:19 (14864): run_atlas exited; CPU time 79941.218534
16:55:19 (14864): called boinc_finish(0)

</stderr_txt>
]]>

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