Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:54:44 (2315776): wrapper (7.7.26015): starting
15:54:44 (2315776): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 15:54:44] Arguments: --nthreads 12
[2026-02-07 15:54:44] Threads: 12
[2026-02-07 15:54:44] Checking for CVMFS
[2026-02-07 15:54:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 15:54:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 15:54:45] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 15:54:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 15:54:45] 2.11.5.0 3857663 99013 246524 156000 3 624 32457939 45568000 27556 130560 0 518829635 99.789 334256037 17102 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-07 15:54:45] CVMFS is ok
[2026-02-07 15:54:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 15:54:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 15:54:45] Further information can be found at the LHC@home message board.
[2026-02-07 15:54:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 15:54:45] Checking for apptainer binary...
[2026-02-07 15:54:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 15:54:45] Running /usr/bin/apptainer --version
[2026-02-07 15:54:46] apptainer version 1.4.1-1.el9
[2026-02-07 15:54:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 15:54:47] wns0075.triumf.lcg
[2026-02-07 15:54:47] apptainer works
[2026-02-07 15:54:47] Set ATHENA_PROC_NUMBER=12
[2026-02-07 15:54:47] Set ATHENA_CORE_NUMBER=12
[2026-02-07 15:54:47] Starting ATLAS job with PandaID=7000875607
[2026-02-07 15:54:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 16:00:08]  *** The last 200 lines of the pilot log: ***
[2026-02-07 16:00:08] 2026-02-07 23:59:31,219 | INFO     | could have reported an average CPU frequency of 1350 MHz (4 samples)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | ..............................
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . Timing measurements:
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . get job = 0 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . initial setup = 29 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . payload setup = 32 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . stage-in = 0 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . payload execution = 53 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . stage-out = 1 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . log creation = 0 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | ..............................
[2026-02-07 16:00:08] 2026-02-07 23:59:31,221 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 16:00:08] 2026-02-07 23:59:31,221 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000875607/pilotlog.txt
[2026-02-07 16:00:08] 2026-02-07 23:59:31,294 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-07 16:00:08] - Log from pilotlog.txt -
[2026-02-07 16:00:08] 2026-02-07 23:59:31,205 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7000875607/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,205 | INFO     | extracted standard info from prmon json
[2026-02-07 16:00:08] 2026-02-07 23:59:31,206 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 16:00:08] 2026-02-07 23:59:31,206 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 16:00:08] 2026-02-07 23:59:31,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 16:00:08] 2026-02-07 23:59:31,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 16:00:08] 2026-02-07 23:59:31,219 | WARNING  | wrong length of table data, x=[1770508624.0], y=[1007.0] (must be same and length>=4)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,219 | INFO     | could have reported an average CPU frequency of 1350 MHz (4 samples)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | ..............................
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . Timing measurements:
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . get job = 0 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . initial setup = 29 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . payload setup = 32 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . stage-in = 0 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . payload execution = 53 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . stage-out = 1 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . log creation = 0 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | ..............................
[2026-02-07 16:00:08] 2026-02-07 23:59:31,221 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 16:00:08] 2026-02-07 23:59:31,221 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000875607/pilotlog.txt
[2026-02-07 16:00:08] 2026-02-07 23:59:31,295 | WARNING  | 
[2026-02-07 16:00:08] [begin log extracts]
[2026-02-07 16:00:08] - Log from pilotlog.txt -
[2026-02-07 16:00:08] 2026-02-07 23:59:31,205 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7000875607/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,205 | INFO     | extracted standard info from prmon json
[2026-02-07 16:00:08] 2026-02-07 23:59:31,206 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 16:00:08] 2026-02-07 23:59:31,206 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 16:00:08] 2026-02-07 23:59:31,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 16:00:08] 2026-02-07 23:59:31,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 16:00:08] 2026-02-07 23:59:31,219 | WARNING  | wrong length of table data, x=[1770508624.0], y=[1007.0] (must be same and length>=4)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,219 | INFO     | could have reported an average CPU frequency of 1350 MHz (4 samples)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | ..............................
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . Timing measurements:
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . get job = 0 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . initial setup = 29 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . payload setup = 32 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . stage-in = 0 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . payload execution = 53 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . stage-out = 1 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | . log creation = 0 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,220 | INFO     | ..............................
[2026-02-07 16:00:08] 2026-02-07 23:59:31,221 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 16:00:08] 2026-02-07 23:59:31,221 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000875607/pilotlog.txt
[2026-02-07 16:00:08] [end log extracts]
[2026-02-07 16:00:08] 2026-02-07 23:59:31,295 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,297 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-07 16:00:08] 2026-02-07 23:59:31,584 | INFO     | time since job start (213s) is within the limit (349056.0s)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,962 | INFO     | 
[2026-02-07 16:00:08] 2026-02-07 23:59:31,962 | INFO     | job summary report
[2026-02-07 16:00:08] 2026-02-07 23:59:31,962 | INFO     | --------------------------------------------------
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | PanDA job id: 7000875607
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | task id: 48442031
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-07 15:57:22,960 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | pilot state: failed 
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | transexitcode: 65
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | exeerrorcode: 65
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | exitcode: 65
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 16:00:08] 2026-02-07 23:59:31,963 | INFO     | cpuconsumptiontime: 23 s
[2026-02-07 16:00:08] 2026-02-07 23:59:31,964 | INFO     | nevents: 0
[2026-02-07 16:00:08] 2026-02-07 23:59:31,964 | INFO     | neventsw: 0
[2026-02-07 16:00:08] 2026-02-07 23:59:31,964 | INFO     | pid: 2324422
[2026-02-07 16:00:08] 2026-02-07 23:59:31,964 | INFO     | pgrp: 2324422
[2026-02-07 16:00:08] 2026-02-07 23:59:31,964 | INFO     | corecount: 12
[2026-02-07 16:00:08] 2026-02-07 23:59:31,964 | INFO     | event service: False
[2026-02-07 16:00:08] 2026-02-07 23:59:31,964 | INFO     | sizes: {0: 2282607, 1: 2283040, 2: 2283096, 90: 2306294, 93: 2310586, 95: 2310614, 211: 2310908}
[2026-02-07 16:00:08] 2026-02-07 23:59:31,964 | INFO     | --------------------------------------------------
[2026-02-07 16:00:08] 2026-02-07 23:59:31,964 | INFO     | 
[2026-02-07 16:00:08] 2026-02-07 23:59:31,964 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-07 16:00:08] 2026-02-07 23:59:32,057 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,058 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,058 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,058 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,058 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,058 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,058 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,059 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,059 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,060 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 16:00:08] 2026-02-07 23:59:32,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,060 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 16:00:08] 2026-02-07 23:59:32,060 | INFO     | job 7000875607 has completed (purged errors)
[2026-02-07 16:00:08] 2026-02-07 23:59:32,060 | INFO     | overall cleanup function is called
[2026-02-07 16:00:08] 2026-02-07 23:59:33,086 | INFO     | --- collectZombieJob: --- 10, [2324422]
[2026-02-07 16:00:08] 2026-02-07 23:59:33,111 | INFO     | zombie collector waiting for pid 2324422
[2026-02-07 16:00:08] 2026-02-07 23:59:33,111 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 16:00:08] 2026-02-07 23:59:33,111 | INFO     | collected zombie processes
[2026-02-07 16:00:08] 2026-02-07 23:59:33,112 | INFO     | will attempt to kill all subprocesses of pid=2324422
[2026-02-07 16:00:08] 2026-02-07 23:59:34,332 | INFO     | PID=2319641 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 16:00:08] 2026-02-07 23:59:34,332 | INFO     | .. there are 42 such processes running
[2026-02-07 16:00:08] 2026-02-07 23:59:34,581 | INFO     | process IDs to be killed: [2324422] (in reverse order)
[2026-02-07 16:00:08] 2026-02-07 23:59:35,073 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 16:00:08] 2026-02-07 23:59:35,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 16:00:08] 2026-02-07 23:59:35,101 | INFO     | did not find any defunct processes belonging to 2324422
[2026-02-07 16:00:08] 2026-02-07 23:59:35,140 | INFO     | did not find any defunct processes belonging to 2324422
[2026-02-07 16:00:08] 2026-02-07 23:59:35,140 | INFO     | ready for new job
[2026-02-07 16:00:08] 2026-02-07 23:59:35,140 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 16:00:08] 2026-02-07 23:59:35,142 | INFO     | **************************************
[2026-02-07 16:00:08] 2026-02-07 23:59:35,142 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 16:00:08] 2026-02-07 23:59:35,143 | INFO     | **************************************
[2026-02-07 16:00:08] 2026-02-07 23:59:35,143 | INFO     | 
[2026-02-07 16:00:08] 2026-02-07 23:59:35,155 | INFO     | architecture information:
[2026-02-07 16:00:08] 2026-02-07 23:59:35,160 | INFO     | executing command: cat /etc/os-release
[2026-02-07 16:00:08] 2026-02-07 23:59:35,245 | INFO     | cat /etc/os-release:
[2026-02-07 16:00:08] NAME="CentOS Linux"
[2026-02-07 16:00:08] VERSION="7 (Core)"
[2026-02-07 16:00:08] ID="centos"
[2026-02-07 16:00:08] ID_LIKE="rhel fedora"
[2026-02-07 16:00:08] VERSION_ID="7"
[2026-02-07 16:00:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 16:00:08] ANSI_COLOR="0;31"
[2026-02-07 16:00:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 16:00:08] HOME_URL="https://www.centos.org/"
[2026-02-07 16:00:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 16:00:08] 
[2026-02-07 16:00:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 16:00:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 16:00:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 16:00:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 16:00:08] 
[2026-02-07 16:00:08] 2026-02-07 23:59:35,246 | INFO     | **************************************
[2026-02-07 16:00:08] 2026-02-07 23:59:35,749 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-07 16:00:08] 2026-02-07 23:59:35,906 | INFO     | sufficient remaining disk space (2121482108928 B)
[2026-02-07 16:00:08] 2026-02-07 23:59:35,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 16:00:08] 2026-02-07 23:59:35,906 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 16:00:08] 2026-02-07 23:59:35,906 | INFO     | update_server=False
[2026-02-07 16:00:08] 2026-02-07 23:59:35,907 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 16:00:08] 2026-02-07 23:59:35,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 16:00:08] 2026-02-07 23:59:35,918 | INFO     | aborting loop
[2026-02-07 16:00:08] 2026-02-07 23:59:35,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 16:00:08] 2026-02-07 23:59:35,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 16:00:08] 2026-02-07 23:59:36,537 | INFO     | all job control threads have been joined
[2026-02-07 16:00:08] 2026-02-07 23:59:36,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 16:00:08] 2026-02-07 23:59:36,715 | INFO     | all payload control threads have been joined
[2026-02-07 16:00:08] 2026-02-07 23:59:36,786 | INFO     | all data control threads have been joined
[2026-02-07 16:00:08] 2026-02-07 23:59:36,912 | INFO     | [job] retrieve thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:36,924 | INFO     | [job] job monitor thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:37,088 | INFO     | [job] validate thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:37,176 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:37,192 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:37,543 | INFO     | [job] control thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:37,595 | INFO     | [data] copytool_in thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:37,619 | INFO     | [job] queue monitor thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:37,723 | INFO     | [payload] control thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:37,737 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:37,791 | INFO     | [data] control thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:37,938 | INFO     | [data] copytool_out thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:38,084 | INFO     | [payload] failed_post thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:38,147 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:38,225 | INFO     | [payload] validate_post thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:39,940 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 16:00:08] 2026-02-07 23:59:58,118 | INFO     | [monitor] cgroup control has ended
[2026-02-07 16:00:08] 2026-02-07 23:59:59,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661616768832)>', '<ExcThread(monitor, started 139660844062464)>']
[2026-02-07 16:00:08] 2026-02-08 00:00:04,560 | INFO     | all workflow threads have been joined
[2026-02-07 16:00:08] 2026-02-08 00:00:04,560 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 16:00:08] 2026-02-08 00:00:04,561 | INFO     | traces error code: 0
[2026-02-07 16:00:08] 2026-02-08 00:00:04,561 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 16:00:08] 2026-02-08 00:00:08,075 | INFO     | PID=2319641 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 16:00:08] 2026-02-08 00:00:08,075 | INFO     | .. there are 42 such processes running
[2026-02-07 16:00:08] 2026-02-08 00:00:08,076 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 16:00:08] 2026-02-08 00:00:08,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 16:00:08] 2026-02-08 00:00:08,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 16:00:08] 2026-02-08 00:00:08,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 16:00:08] 2026-02-08 00:00:08,076 | CRITICAL | thread 'MainThread' is not alive
[2026-02-07 16:00:08] 2026-02-08 00:00:08,076 | INFO     | [monitor] control thread has ended
[2026-02-07 16:00:08] 2026-02-08 00:00:08,420 [wrapper] ==== pilot stdout END ====
[2026-02-07 16:00:08] 2026-02-08 00:00:08,442 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 16:00:08] 2026-02-08 00:00:08,457 [wrapper] pilotpid: 2319641
[2026-02-07 16:00:08] 2026-02-08 00:00:08,475 [wrapper] Pilot exit status: 0
[2026-02-07 16:00:08] 2026-02-08 00:00:08,582 [wrapper] pandaids: 7000875607
[2026-02-07 16:00:08] 2026-02-08 00:00:08,818 [wrapper] cleanup supervisor_pilot 2319647 2319642
[2026-02-07 16:00:08] 2026-02-08 00:00:08,838 [wrapper] Test setup, not cleaning
[2026-02-07 16:00:08] 2026-02-08 00:00:08,867 [wrapper] apfmon messages muted
[2026-02-07 16:00:08] 2026-02-08 00:00:08,871 [wrapper] ==== wrapper stdout END ====
[2026-02-07 16:00:08] 2026-02-08 00:00:08,874 [wrapper] ==== wrapper stderr END ====
[2026-02-07 16:00:08]  *** Error codes and diagnostics ***
[2026-02-07 16:00:08]     "exeErrorCode": 65,
[2026-02-07 16:00:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 16:00:08]     "pilotErrorCode": 1305,
[2026-02-07 16:00:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 16:00:08]  *** Listing of results directory ***
[2026-02-07 16:00:08] total 491220
[2026-02-07 16:00:08] -rwx------. 1 boinc boinc     36322 Feb  7 10:36 runpilot2-wrapper.sh
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc    584627 Feb  7 10:39 pilot3.tar.gz
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc      5111 Feb  7 10:40 queuedata.json
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc       100 Feb  7 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 16:00:08] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 15:54 run_atlas
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc       105 Feb  7 15:54 job.xml
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc      6593 Feb  7 15:54 init_data.xml
[2026-02-07 16:00:08] -rw-r--r--. 2 boinc boinc 498863518 Feb  7 15:54 EVNT.48442027._000082.pool.root.1
[2026-02-07 16:00:08] drwxrwx--x. 2 boinc boinc      4096 Feb  7 15:54 shared
[2026-02-07 16:00:08] -rw-r--r--. 2 boinc boinc    597948 Feb  7 15:54 input.tar.gz
[2026-02-07 16:00:08] -rw-r--r--. 2 boinc boinc     15845 Feb  7 15:54 start_atlas.sh
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc         0 Feb  7 15:54 boinc_lockfile
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc      2528 Feb  7 15:54 pandaJob.out
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc   1009502 Feb  7 15:55 agis_schedconf.cvmfs.json
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc   1513088 Feb  7 15:55 agis_ddmendpoints.agis.ALL.json
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc       445 Feb  7 15:55 workernode_map.json
[2026-02-07 16:00:08] drwx------. 5 boinc boinc      4096 Feb  7 15:55 pilot3
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc       525 Feb  7 15:57 boinc_task_state.xml
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc       954 Feb  7 15:57 memory_monitor_summary.json
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc     21786 Feb  7 15:57 log.48442031._004110.job.log.tgz.1
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc      7020 Feb  7 15:59 heartbeat.json
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc        95 Feb  7 15:59 pilot_heartbeat.json
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc      8192 Feb  7 16:00 boinc_mmap_file
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc       893 Feb  7 16:00 pilotlog.txt
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc        23 Feb  7 16:00 wrapper_checkpoint.txt
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc     86686 Feb  7 16:00 log.48442031._004110.job.log.1
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc       188 Feb  7 16:00 output.list
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc       620 Feb  7 16:00 runtime_log
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc    122880 Feb  7 16:00 result.tar.gz
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc      8635 Feb  7 16:00 runtime_log.err
[2026-02-07 16:00:08] -rw-------. 1 boinc boinc       643 Feb  7 16:00 JgtKDmiL288n9Rq4apOajLDm4fhM0noT9bVooX4SDmDYbKDmngLeWm.diag
[2026-02-07 16:00:08] -rw-r--r--. 1 boinc boinc     21864 Feb  7 16:00 stderr.txt
[2026-02-07 16:00:09] No HITS result produced
[2026-02-07 16:00:09]  *** Contents of shared directory: ***
[2026-02-07 16:00:09] total 487896
[2026-02-07 16:00:09] -rw-r--r--. 2 boinc boinc 498863518 Feb  7 15:54 ATLAS.root_0
[2026-02-07 16:00:09] -rw-r--r--. 2 boinc boinc    597948 Feb  7 15:54 input.tar.gz
[2026-02-07 16:00:09] -rw-r--r--. 2 boinc boinc     15845 Feb  7 15:54 start_atlas.sh
[2026-02-07 16:00:09] -rw-------. 1 boinc boinc    122880 Feb  7 16:00 result.tar.gz
16:00:10 (2315776): run_atlas exited; CPU time 33.420161
16:00:10 (2315776): called boinc_finish(0)

</stderr_txt>
]]>

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