Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:16:14 (1072677): wrapper (7.7.26015): starting
13:16:14 (1072677): wrapper: running run_atlas (--nthreads 3)
[2026-02-08 13:16:14] Arguments: --nthreads 3
[2026-02-08 13:16:14] Threads: 3
[2026-02-08 13:16:14] Checking for CVMFS
[2026-02-08 13:16:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 13:16:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 13:16:14] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 13:16:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 13:16:14] 2.9.2.0 578680 3282 81084 156018 0 50 19485507 36864000 0 130560 0 1326357 99.982 120898 13881 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-08 13:16:14] CVMFS is ok
[2026-02-08 13:16:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 13:16:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 13:16:14] Further information can be found at the LHC@home message board.
[2026-02-08 13:16:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 13:16:14] Checking for apptainer binary...
[2026-02-08 13:16:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 13:16:14] Running /usr/bin/apptainer --version
[2026-02-08 13:16:14] apptainer version 1.4.1-1.1
[2026-02-08 13:16:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 13:16:14] thA305
[2026-02-08 13:16:14] apptainer works
[2026-02-08 13:16:14] Set ATHENA_PROC_NUMBER=3
[2026-02-08 13:16:14] Set ATHENA_CORE_NUMBER=3
[2026-02-08 13:16:14] Starting ATLAS job with PandaID=6998615467
[2026-02-08 13:16:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 14:42:38]  *** The last 200 lines of the pilot log: ***
[2026-02-08 14:42:38] 2026-02-08 13:41:34,414 | INFO     | ready for new job
[2026-02-08 14:42:38] 2026-02-08 13:41:34,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 14:42:38] 2026-02-08 13:41:34,415 | INFO     | **************************************
[2026-02-08 14:42:38] 2026-02-08 13:41:34,415 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 14:42:38] 2026-02-08 13:41:34,415 | INFO     | **************************************
[2026-02-08 14:42:38] 2026-02-08 13:41:34,415 | INFO     | 
[2026-02-08 14:42:38] 2026-02-08 13:41:34,415 | INFO     | architecture information:
[2026-02-08 14:42:38] 2026-02-08 13:41:34,415 | INFO     | executing command: cat /etc/os-release
[2026-02-08 14:42:38] 2026-02-08 13:41:34,424 | INFO     | cat /etc/os-release:
[2026-02-08 14:42:38] NAME="CentOS Linux"
[2026-02-08 14:42:38] VERSION="7 (Core)"
[2026-02-08 14:42:38] ID="centos"
[2026-02-08 14:42:38] ID_LIKE="rhel fedora"
[2026-02-08 14:42:38] VERSION_ID="7"
[2026-02-08 14:42:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 14:42:38] ANSI_COLOR="0;31"
[2026-02-08 14:42:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 14:42:38] HOME_URL="https://www.centos.org/"
[2026-02-08 14:42:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 14:42:38] 
[2026-02-08 14:42:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 14:42:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 14:42:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 14:42:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 14:42:38] 
[2026-02-08 14:42:38] 2026-02-08 13:41:34,424 | INFO     | **************************************
[2026-02-08 14:42:38] 2026-02-08 13:41:34,700 | WARNING  | process 1081150 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 14:42:38] 2026-02-08 13:41:34,733 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 14:42:38] 2026-02-08 13:41:34,776 | INFO     | number of running child processes to parent process 1081150: 1
[2026-02-08 14:42:38] 2026-02-08 13:41:34,776 | INFO     | maximum number of monitored processes: 6
[2026-02-08 14:42:38] 2026-02-08 13:41:34,776 | INFO     | aborting job monitoring since job object (job id=6998615467) has expired
[2026-02-08 14:42:38] 2026-02-08 13:41:34,927 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-08 14:42:38] 2026-02-08 13:41:34,940 | INFO     | sufficient remaining disk space (237003341824 B)
[2026-02-08 14:42:38] 2026-02-08 13:41:34,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 14:42:38] 2026-02-08 13:41:34,940 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 14:42:38] 2026-02-08 13:41:34,940 | INFO     | update_server=False
[2026-02-08 14:42:38] 2026-02-08 13:41:34,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 14:42:38] 2026-02-08 13:41:34,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 14:42:38] 2026-02-08 13:41:34,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 14:42:38] 2026-02-08 13:41:34,941 | INFO     | will abort loop
[2026-02-08 14:42:38] 2026-02-08 13:41:34,941 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 14:42:38] 2026-02-08 13:41:34,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 14:42:38] 2026-02-08 13:41:35,589 | INFO     | all payload control threads have been joined
[2026-02-08 14:42:38] 2026-02-08 13:41:35,617 | INFO     | all job control threads have been joined
[2026-02-08 14:42:38] 2026-02-08 13:41:35,946 | INFO     | [job] retrieve thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:35,946 | INFO     | [job] queue monitor thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:35,947 | INFO     | [job] job monitor thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:35,988 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:36,034 | INFO     | all data control threads have been joined
[2026-02-08 14:42:38] 2026-02-08 13:41:36,054 | INFO     | [data] copytool_in thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:36,133 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:36,562 | INFO     | [payload] validate_post thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:36,595 | INFO     | [payload] control thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:36,623 | INFO     | [job] control thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:36,947 | INFO     | [data] copytool_out thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:37,036 | INFO     | [data] control thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:37,248 | INFO     | [payload] failed_post thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:37,337 | INFO     | [job] validate thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:37,402 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:38,948 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:41:45,592 | INFO     | job.realtimelogging is not enabled
[2026-02-08 14:42:38] 2026-02-08 13:41:46,598 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 14:42:38] 2026-02-08 13:42:05,787 | INFO     | PID=1076724 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 14:42:38] 2026-02-08 13:42:05,788 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 14:42:38] 2026-02-08 13:42:05,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 14:42:38] 2026-02-08 13:42:05,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 14:42:38] 2026-02-08 13:42:31,766 | INFO     | [monitor] cgroup control has ended
[2026-02-08 14:42:38] 2026-02-08 13:42:33,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941295982400)>', '<ExcThread(monitor, started 139940939675392)>']
[2026-02-08 14:42:38] 2026-02-08 13:42:33,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 14:42:38] 2026-02-08 13:42:33,930 | INFO     | [monitor] control thread has ended
[2026-02-08 14:42:38] 2026-02-08 13:42:38,591 | INFO     | all workflow threads have been joined
[2026-02-08 14:42:38] 2026-02-08 13:42:38,591 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 14:42:38] 2026-02-08 13:42:38,591 | INFO     | traces error code: 0
[2026-02-08 14:42:38] 2026-02-08 13:42:38,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 14:42:38] 2026-02-08 13:42:38,641 [wrapper] ==== pilot stdout END ====
[2026-02-08 14:42:38] 2026-02-08 13:42:38,643 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 14:42:38] 2026-02-08 13:42:38,645 [wrapper] pilotpid: 1076724
[2026-02-08 14:42:38] 2026-02-08 13:42:38,647 [wrapper] Pilot exit status: 0
[2026-02-08 14:42:38] 2026-02-08 13:42:38,655 [wrapper] pandaids: 6998615467
[2026-02-08 14:42:38] 2026-02-08 13:42:38,672 [wrapper] cleanup supervisor_pilot 1086765 1076725
[2026-02-08 14:42:38] 2026-02-08 13:42:38,674 [wrapper] Test setup, not cleaning
[2026-02-08 14:42:38] 2026-02-08 13:42:38,677 [wrapper] apfmon messages muted
[2026-02-08 14:42:38] 2026-02-08 13:42:38,679 [wrapper] ==== wrapper stdout END ====
[2026-02-08 14:42:38] 2026-02-08 13:42:38,681 [wrapper] ==== wrapper stderr END ====
[2026-02-08 14:42:38]  *** Error codes and diagnostics ***
[2026-02-08 14:42:38]     "exeErrorCode": 0,
[2026-02-08 14:42:38]     "exeErrorDiag": "",
[2026-02-08 14:42:38]     "pilotErrorCode": 0,
[2026-02-08 14:42:38]     "pilotErrorDiag": "",
[2026-02-08 14:42:38]  *** Listing of results directory ***
[2026-02-08 14:42:38] total 667064
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc      5111 Feb  6 23:50 queuedata.json
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc    584627 Feb  6 23:50 pilot3.tar.gz
[2026-02-08 14:42:38] -rwx------ 1 boinc boinc     36322 Feb  6 23:51 runpilot2-wrapper.sh
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc       100 Feb  8 13:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 14:42:38] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 13:16 run_atlas
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc       105 Feb  8 13:16 job.xml
[2026-02-08 14:42:38] -rw-r--r-- 2 boinc boinc 492850708 Feb  8 13:16 EVNT.48318008._000191.pool.root.1
[2026-02-08 14:42:38] -rw-r--r-- 2 boinc boinc    597948 Feb  8 13:16 input.tar.gz
[2026-02-08 14:42:38] -rw-r--r-- 2 boinc boinc     15845 Feb  8 13:16 start_atlas.sh
[2026-02-08 14:42:38] drwxrwx--x 2 boinc boinc      4096 Feb  8 13:16 shared
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc         0 Feb  8 13:16 boinc_setup_complete
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc      6439 Feb  8 13:16 init_data.xml
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc         0 Feb  8 13:16 boinc_lockfile
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc      2524 Feb  8 13:16 pandaJob.out
[2026-02-08 14:42:38] -rw------- 1 boinc boinc   1009518 Feb  8 13:16 agis_schedconf.cvmfs.json
[2026-02-08 14:42:38] -rw------- 1 boinc boinc   1513088 Feb  8 13:16 agis_ddmendpoints.agis.ALL.json
[2026-02-08 14:42:38] -rw------- 1 boinc boinc       426 Feb  8 13:16 workernode_map.json
[2026-02-08 14:42:38] drwx------ 5 boinc boinc      4096 Feb  8 13:16 pilot3
[2026-02-08 14:42:38] -rw------- 1 boinc boinc 184317877 Feb  8 14:41 HITS.48318010._010554.pool.root.1
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc       530 Feb  8 14:41 boinc_task_state.xml
[2026-02-08 14:42:38] -rw------- 1 boinc boinc      1019 Feb  8 14:41 memory_monitor_summary.json
[2026-02-08 14:42:38] -rw------- 1 boinc boinc    243130 Feb  8 14:41 log.48318010._010554.job.log.tgz.1
[2026-02-08 14:42:38] -rw------- 1 boinc boinc      6303 Feb  8 14:41 heartbeat.json
[2026-02-08 14:42:38] -rw------- 1 boinc boinc        95 Feb  8 14:42 pilot_heartbeat.json
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc      8192 Feb  8 14:42 boinc_mmap_file
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc        27 Feb  8 14:42 wrapper_checkpoint.txt
[2026-02-08 14:42:38] -rw------- 1 boinc boinc      5344 Feb  8 14:42 pilotlog.txt
[2026-02-08 14:42:38] -rw------- 1 boinc boinc    745980 Feb  8 14:42 log.48318010._010554.job.log.1
[2026-02-08 14:42:38] -rw------- 1 boinc boinc       357 Feb  8 14:42 output.list
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc       620 Feb  8 14:42 runtime_log
[2026-02-08 14:42:38] -rw------- 1 boinc boinc   1003520 Feb  8 14:42 result.tar.gz
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc      8896 Feb  8 14:42 runtime_log.err
[2026-02-08 14:42:38] -rw------- 1 boinc boinc       657 Feb  8 14:42 VVPMDmxqj88n9Rq4apOajLDm4fhM0noT9bVooX4SDmNgZKDmk9Yovn.diag
[2026-02-08 14:42:38] -rw-r--r-- 1 boinc boinc     10250 Feb  8 14:42 stderr.txt
[2026-02-08 14:42:38] HITS file was successfully produced:
[2026-02-08 14:42:38] -rw------- 1 boinc boinc 184317877 Feb  8 14:41 shared/HITS.pool.root.1
[2026-02-08 14:42:38]  *** Contents of shared directory: ***
[2026-02-08 14:42:38] total 662888
[2026-02-08 14:42:38] -rw-r--r-- 2 boinc boinc 492850708 Feb  8 13:16 ATLAS.root_0
[2026-02-08 14:42:38] -rw-r--r-- 2 boinc boinc    597948 Feb  8 13:16 input.tar.gz
[2026-02-08 14:42:38] -rw-r--r-- 2 boinc boinc     15845 Feb  8 13:16 start_atlas.sh
[2026-02-08 14:42:38] -rw------- 1 boinc boinc 184317877 Feb  8 14:41 HITS.pool.root.1
[2026-02-08 14:42:38] -rw------- 1 boinc boinc   1003520 Feb  8 14:42 result.tar.gz
14:42:40 (1072677): run_atlas exited; CPU time 14725.886605
14:42:40 (1072677): called boinc_finish(0)

</stderr_txt>
]]>

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