Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:31:11 (4075560): wrapper (7.7.26015): starting
02:31:11 (4075560): wrapper: running run_atlas (--nthreads 4)
[2026-02-08 02:31:11] Arguments: --nthreads 4
[2026-02-08 02:31:11] Threads: 4
[2026-02-08 02:31:11] Checking for CVMFS
[2026-02-08 02:31:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 02:31:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 02:31:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 02:31:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 02:31:13] 2.13.1.0 2667185 2641 91652 156002 0 50 9447013 10240000 1822 130560 0 3043056 99.993 97823 310 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-08 02:31:13] CVMFS is ok
[2026-02-08 02:31:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 02:31:13] Checking for apptainer binary...
[2026-02-08 02:31:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 02:31:13] Running /usr/bin/apptainer --version
[2026-02-08 02:31:13] apptainer version 1.4.5
[2026-02-08 02:31:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 02:31:13] ellievl
[2026-02-08 02:31:13] apptainer works
[2026-02-08 02:31:13] Set ATHENA_PROC_NUMBER=4
[2026-02-08 02:31:13] Set ATHENA_CORE_NUMBER=4
[2026-02-08 02:31:13] Starting ATLAS job with PandaID=7000875189
[2026-02-08 02:31:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 04:11:00]  *** The last 200 lines of the pilot log: ***
[2026-02-08 04:11:00]  mtime=0
[2026-02-08 04:11:00]  protocol_id=None
[2026-02-08 04:11:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 04:11:00]  replicas=None
[2026-02-08 04:11:00]  scope=mc23_13p6TeV
[2026-02-08 04:11:00]  status=None
[2026-02-08 04:11:00]  status_code=0
[2026-02-08 04:11:00]  storage_token=
[2026-02-08 04:11:00]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7000875189/log.48318042._012085.job.log.tgz.1
[2026-02-08 04:11:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/87/log.48318042._012085.job.log.tgz.1
[2026-02-08 04:11:00]  workdir=None
[2026-02-08 04:11:00] ]
[2026-02-08 04:11:00] 2026-02-08 03:10:22,855 | INFO     | transferring file log.48318042._012085.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7000875189/log.48318042._012085.job.log.tgz.1 to /var/li
[2026-02-08 04:11:00] 2026-02-08 03:10:22,856 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7000875189/log.48318042._012085.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-08 04:11:00] 2026-02-08 03:10:22,884 | INFO     | adding to output.list: log.48318042._012085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/87/log.48318042._012085.job.log.tg
[2026-02-08 04:11:00] 2026-02-08 03:10:22,886 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 04:11:00] 2026-02-08 03:10:22,886 | INFO     | summary of transferred files:
[2026-02-08 04:11:00] 2026-02-08 03:10:22,886 | INFO     |  -- lfn=log.48318042._012085.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 04:11:00] 2026-02-08 03:10:22,887 | INFO     | stage-out finished correctly
[2026-02-08 04:11:00] 2026-02-08 03:10:22,938 | INFO     | time since job start (5923s) is within the limit (349056.0s)
[2026-02-08 04:11:00] 2026-02-08 03:10:24,753 | INFO     | monitor loop #443: job 0:7000875189 is in state 'finished'
[2026-02-08 04:11:00] 2026-02-08 03:10:24,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 04:11:00] 2026-02-08 03:10:24,944 | INFO     | time since job start (5925s) is within the limit (349056.0s)
[2026-02-08 04:11:00] 2026-02-08 03:10:25,153 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 04:11:00] 2026-02-08 03:10:26,951 | INFO     | time since job start (5927s) is within the limit (349056.0s)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,258 | INFO     | monitor loop #444: job 0:7000875189 is in state 'finished'
[2026-02-08 04:11:00] 2026-02-08 03:10:27,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,387 | INFO     | job 7000875189 has state=finished
[2026-02-08 04:11:00] 2026-02-08 03:10:27,387 | INFO     | preparing for final server update for job 7000875189 in state='finished'
[2026-02-08 04:11:00] 2026-02-08 03:10:27,388 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7000875189/jobReport.json
[2026-02-08 04:11:00] 2026-02-08 03:10:27,389 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/0/workernode_map.json
[2026-02-08 04:11:00] 2026-02-08 03:10:27,390 | INFO     | this job has now completed (state=finished)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,390 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,390 | INFO     | log transfer has been attempted: DONE
[2026-02-08 04:11:00] 2026-02-08 03:10:27,390 | INFO     | job 7000875189 has finished - writing final server update
[2026-02-08 04:11:00] 2026-02-08 03:10:27,390 | INFO     | total number of processed events: 400 (read)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,393 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7000875189/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,393 | INFO     | extracted standard info from prmon json
[2026-02-08 04:11:00] 2026-02-08 03:10:27,393 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 04:11:00] 2026-02-08 03:10:27,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 04:11:00] 2026-02-08 03:10:27,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 04:11:00] 2026-02-08 03:10:27,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 04:11:00] 2026-02-08 03:10:27,395 | INFO     | fitting pss+swap vs Time
[2026-02-08 04:11:00] 2026-02-08 03:10:27,395 | INFO     | sum of square deviations: 226022842.5
[2026-02-08 04:11:00] 2026-02-08 03:10:27,395 | INFO     | sum of deviations: -24363734280.000008
[2026-02-08 04:11:00] 2026-02-08 03:10:27,395 | INFO     | mean x: 1770517347.5
[2026-02-08 04:11:00] 2026-02-08 03:10:27,395 | INFO     | mean y: 2499663.6666666665
[2026-02-08 04:11:00] 2026-02-08 03:10:27,395 | INFO     | intersect: 190852299248.06235
[2026-02-08 04:11:00] 2026-02-08 03:10:27,395 | INFO     | chi2: 0.171354288566733
[2026-02-08 04:11:00] 2026-02-08 03:10:27,395 | INFO     | current memory leak: -107.79 B/s (using 90 data points, chi2=0.17)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | ..............................
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | . Timing measurements:
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | . get job = 0 s
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | . initial setup = 9 s
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | . payload setup = 10 s
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | . stage-in = 0 s
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | . payload execution = 5898 s
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | . stage-out = 0 s
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | . log creation = 0 s
[2026-02-08 04:11:00] 2026-02-08 03:10:27,396 | INFO     | ..............................
[2026-02-08 04:11:00] 2026-02-08 03:10:27,432 | INFO     | 
[2026-02-08 04:11:00] 2026-02-08 03:10:27,432 | INFO     | job summary report
[2026-02-08 04:11:00] 2026-02-08 03:10:27,432 | INFO     | --------------------------------------------------
[2026-02-08 04:11:00] 2026-02-08 03:10:27,432 | INFO     | PanDA job id: 7000875189
[2026-02-08 04:11:00] 2026-02-08 03:10:27,432 | INFO     | task id: 48318042
[2026-02-08 04:11:00] 2026-02-08 03:10:27,432 | INFO     | errors: (none)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,432 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 04:11:00] 2026-02-08 03:10:27,432 | INFO     | pilot state: finished 
[2026-02-08 04:11:00] 2026-02-08 03:10:27,432 | INFO     | transexitcode: 0
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | exeerrorcode: 0
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | exeerrordiag: 
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | exitcode: 0
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | exitmsg: OK
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | cpuconsumptiontime: 22400 s
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | nevents: 400
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | neventsw: 0
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | pid: 4084153
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | pgrp: 4084153
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | corecount: 4
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | event service: False
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | sizes: {0: 2282629, 1: 2283146, 11: 2283146, 5912: 2309757, 5913: 2318838, 5915: 2318838, 5918: 2319160}
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | --------------------------------------------------
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | 
[2026-02-08 04:11:00] 2026-02-08 03:10:27,433 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2026-02-08 04:11:00] 2026-02-08 03:10:27,462 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,464 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,464 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 04:11:00] 2026-02-08 03:10:27,464 | INFO     | job 7000875189 has completed (purged errors)
[2026-02-08 04:11:00] 2026-02-08 03:10:27,464 | INFO     | overall cleanup function is called
[2026-02-08 04:11:00] 2026-02-08 03:10:28,472 | INFO     | --- collectZombieJob: --- 10, [4084153]
[2026-02-08 04:11:00] 2026-02-08 03:10:28,472 | INFO     | zombie collector waiting for pid 4084153
[2026-02-08 04:11:00] 2026-02-08 03:10:28,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 04:11:00] 2026-02-08 03:10:28,473 | INFO     | collected zombie processes
[2026-02-08 04:11:00] 2026-02-08 03:10:28,473 | INFO     | will attempt to kill all subprocesses of pid=4084153
[2026-02-08 04:11:00] 2026-02-08 03:10:28,696 | INFO     | process IDs to be killed: [4084153] (in reverse order)
[2026-02-08 04:11:00] 2026-02-08 03:10:28,791 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 04:11:00] 2026-02-08 03:10:28,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 04:11:00] 2026-02-08 03:10:28,798 | INFO     | did not find any defunct processes belonging to 4084153
[2026-02-08 04:11:00] 2026-02-08 03:10:28,803 | INFO     | did not find any defunct processes belonging to 4084153
[2026-02-08 04:11:00] 2026-02-08 03:10:28,803 | INFO     | ready for new job
[2026-02-08 04:11:00] 2026-02-08 03:10:28,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 04:11:00] 2026-02-08 03:10:28,806 | INFO     | **************************************
[2026-02-08 04:11:00] 2026-02-08 03:10:28,806 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 04:11:00] 2026-02-08 03:10:28,806 | INFO     | **************************************
[2026-02-08 04:11:00] 2026-02-08 03:10:28,806 | INFO     | 
[2026-02-08 04:11:00] 2026-02-08 03:10:28,807 | INFO     | pilot is running in a VM
[2026-02-08 04:11:00] 2026-02-08 03:10:28,807 | INFO     | architecture information:
[2026-02-08 04:11:00] 2026-02-08 03:10:28,807 | INFO     | executing command: cat /etc/os-release
[2026-02-08 04:11:00] 2026-02-08 03:10:28,829 | INFO     | cat /etc/os-release:
[2026-02-08 04:11:00] NAME="CentOS Linux"
[2026-02-08 04:11:00] VERSION="7 (Core)"
[2026-02-08 04:11:00] ID="centos"
[2026-02-08 04:11:00] ID_LIKE="rhel fedora"
[2026-02-08 04:11:00] VERSION_ID="7"
[2026-02-08 04:11:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 04:11:00] ANSI_COLOR="0;31"
[2026-02-08 04:11:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 04:11:00] HOME_URL="https://www.centos.org/"
[2026-02-08 04:11:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 04:11:00] 
[2026-02-08 04:11:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 04:11:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 04:11:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 04:11:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 04:11:00] 
[2026-02-08 04:11:00] 2026-02-08 03:10:28,830 | INFO     | **************************************
[2026-02-08 04:11:00] 2026-02-08 03:10:29,334 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2026-02-08 04:11:00] 2026-02-08 03:10:29,354 | INFO     | sufficient remaining disk space (50158632960 B)
[2026-02-08 04:11:00] 2026-02-08 03:10:29,355 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 04:11:00] 2026-02-08 03:10:29,355 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 04:11:00] 2026-02-08 03:10:29,355 | INFO     | update_server=False
[2026-02-08 04:11:00] 2026-02-08 03:10:29,355 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 04:11:00] 2026-02-08 03:10:29,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 04:11:00] 2026-02-08 03:10:29,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 04:11:00] 2026-02-08 03:10:29,664 | INFO     | all data control threads have been joined
[2026-02-08 04:11:00] 2026-02-08 03:10:29,756 | INFO     | all payload control threads have been joined
[2026-02-08 04:11:00] 2026-02-08 03:10:29,762 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 04:11:00] 2026-02-08 03:10:29,762 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 04:11:00] 2026-02-08 03:10:29,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 04:11:00] 2026-02-08 03:10:29,763 | INFO     | will abort loop
[2026-02-08 04:11:00] 2026-02-08 03:10:30,208 | INFO     | all job control threads have been joined
[2026-02-08 04:11:00] 2026-02-08 03:10:30,360 | INFO     | [job] retrieve thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:30,362 | INFO     | [job] queue monitor thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:30,670 | INFO     | [data] control thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:30,762 | INFO     | [payload] control thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:30,768 | INFO     | [job] job monitor thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:30,860 | INFO     | [payload] failed_post thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:31,155 | INFO     | [job] validate thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:31,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 04:11:00] 2026-02-08 03:10:31,214 | INFO     | [job] control thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:31,337 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:31,363 | INFO     | [data] copytool_out thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:31,377 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:31,422 | INFO     | [payload] validate_post thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:31,630 | INFO     | [data] copytool_in thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:31,792 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:35,206 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:39,769 | INFO     | job.realtimelogging is not enabled
[2026-02-08 04:11:00] 2026-02-08 03:10:40,775 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 04:11:00] 2026-02-08 03:10:46,336 | INFO     | [monitor] cgroup control has ended
[2026-02-08 04:11:00] 2026-02-08 03:10:46,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135000753657664)>', '<ExcThread(monitor, started 134999722411776)>']
[2026-02-08 04:11:00] 2026-02-08 03:10:51,431 | INFO     | all workflow threads have been joined
[2026-02-08 04:11:00] 2026-02-08 03:10:51,432 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 04:11:00] 2026-02-08 03:10:51,432 | INFO     | traces error code: 0
[2026-02-08 04:11:00] 2026-02-08 03:10:51,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 04:11:00] 2026-02-08 03:11:00,320 | INFO     | PID=4079590 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 04:11:00] 2026-02-08 03:11:00,320 | INFO     | .. there are 3 such processes running
[2026-02-08 04:11:00] 2026-02-08 03:11:00,320 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 04:11:00] 2026-02-08 03:11:00,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 04:11:00] 2026-02-08 03:11:00,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 04:11:00] 2026-02-08 03:11:00,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 04:11:00] 2026-02-08 03:11:00,321 | INFO     | [monitor] control thread has ended
[2026-02-08 04:11:00] 2026-02-08 03:11:00,426 [wrapper] ==== pilot stdout END ====
[2026-02-08 04:11:00] 2026-02-08 03:11:00,432 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 04:11:00] 2026-02-08 03:11:00,438 [wrapper] pilotpid: 4079590
[2026-02-08 04:11:00] 2026-02-08 03:11:00,444 [wrapper] Pilot exit status: 0
[2026-02-08 04:11:00] 2026-02-08 03:11:00,467 [wrapper] pandaids: 7000875189
[2026-02-08 04:11:00] 2026-02-08 03:11:00,536 [wrapper] cleanup supervisor_pilot 4129404 4079591
[2026-02-08 04:11:00] 2026-02-08 03:11:00,543 [wrapper] Test setup, not cleaning
[2026-02-08 04:11:00] 2026-02-08 03:11:00,549 [wrapper] apfmon messages muted
[2026-02-08 04:11:00] 2026-02-08 03:11:00,555 [wrapper] ==== wrapper stdout END ====
[2026-02-08 04:11:00] 2026-02-08 03:11:00,561 [wrapper] ==== wrapper stderr END ====
[2026-02-08 04:11:00]  *** Error codes and diagnostics ***
[2026-02-08 04:11:00]     "exeErrorCode": 0,
[2026-02-08 04:11:00]     "exeErrorDiag": "",
[2026-02-08 04:11:00]     "pilotErrorCode": 0,
[2026-02-08 04:11:00]     "pilotErrorDiag": "",
[2026-02-08 04:11:00]  *** Listing of results directory ***
[2026-02-08 04:11:00] insgesamt 680356
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc    584627 Feb  7 19:32 pilot3.tar.gz
[2026-02-08 04:11:00] -rwx------ 1 yeti boinc     36322 Feb  7 19:33 runpilot2-wrapper.sh
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc      5111 Feb  7 19:35 queuedata.json
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc       100 Feb  8 02:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 04:11:00] -rwxr-xr-x 1 yeti boinc      7986 Feb  8 02:31 run_atlas
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc       105 Feb  8 02:31 job.xml
[2026-02-08 04:11:00] -rw-r--r-- 2 yeti boinc 497454922 Feb  8 02:31 EVNT.48318040._000232.pool.root.1
[2026-02-08 04:11:00] -rw-r--r-- 2 yeti boinc     15845 Feb  8 02:31 start_atlas.sh
[2026-02-08 04:11:00] drwxrwx--x 2 yeti boinc      4096 Feb  8 02:31 shared
[2026-02-08 04:11:00] -rw-r--r-- 2 yeti boinc    597953 Feb  8 02:31 input.tar.gz
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc      6558 Feb  8 02:31 init_data.xml
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc         0 Feb  8 02:31 boinc_setup_complete
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc         0 Feb  8 02:31 boinc_lockfile
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc      2537 Feb  8 02:31 pandaJob.out
[2026-02-08 04:11:00] -rw------- 1 yeti boinc        52 Feb  8 02:31 setup.sh.local
[2026-02-08 04:11:00] -rw------- 1 yeti boinc   1009510 Feb  8 02:31 agis_schedconf.cvmfs.json
[2026-02-08 04:11:00] -rw------- 1 yeti boinc   1513088 Feb  8 02:31 agis_ddmendpoints.agis.ALL.json
[2026-02-08 04:11:00] -rw------- 1 yeti boinc       419 Feb  8 02:31 workernode_map.json
[2026-02-08 04:11:00] drwx------ 5 yeti boinc      4096 Feb  8 02:31 pilot3
[2026-02-08 04:11:00] -rw------- 1 yeti boinc 192968147 Feb  8 04:09 HITS.48318042._012085.pool.root.1
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc       530 Feb  8 04:10 boinc_task_state.xml
[2026-02-08 04:11:00] -rw------- 1 yeti boinc        95 Feb  8 04:10 pilot_heartbeat.json
[2026-02-08 04:11:00] -rw------- 1 yeti boinc      1015 Feb  8 04:10 memory_monitor_summary.json
[2026-02-08 04:11:00] -rw------- 1 yeti boinc    288551 Feb  8 04:10 log.48318042._012085.job.log.tgz.1
[2026-02-08 04:11:00] -rw------- 1 yeti boinc      6277 Feb  8 04:10 heartbeat.json
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc        27 Feb  8 04:10 wrapper_checkpoint.txt
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc      8192 Feb  8 04:10 boinc_mmap_file
[2026-02-08 04:11:00] -rw------- 1 yeti boinc       822 Feb  8 04:11 pilotlog.txt
[2026-02-08 04:11:00] -rw------- 1 yeti boinc    868766 Feb  8 04:11 log.48318042._012085.job.log.1
[2026-02-08 04:11:00] -rw------- 1 yeti boinc       357 Feb  8 04:11 output.list
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc       620 Feb  8 04:11 runtime_log
[2026-02-08 04:11:00] -rw------- 1 yeti boinc   1177600 Feb  8 04:11 result.tar.gz
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc      9536 Feb  8 04:11 runtime_log.err
[2026-02-08 04:11:00] -rw------- 1 yeti boinc       637 Feb  8 04:11 ekhKDm5I288nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqpbKDmTtXpfm.diag
[2026-02-08 04:11:00] -rw-r--r-- 1 yeti boinc     21430 Feb  8 04:11 stderr.txt
[2026-02-08 04:11:00] HITS file was successfully produced:
[2026-02-08 04:11:00] -rw------- 1 yeti boinc 192968147 Feb  8 04:09 shared/HITS.pool.root.1
[2026-02-08 04:11:00]  *** Contents of shared directory: ***
[2026-02-08 04:11:00] insgesamt 676004
[2026-02-08 04:11:00] -rw-r--r-- 2 yeti boinc 497454922 Feb  8 02:31 ATLAS.root_0
[2026-02-08 04:11:00] -rw-r--r-- 2 yeti boinc     15845 Feb  8 02:31 start_atlas.sh
[2026-02-08 04:11:00] -rw-r--r-- 2 yeti boinc    597953 Feb  8 02:31 input.tar.gz
[2026-02-08 04:11:00] -rw------- 1 yeti boinc 192968147 Feb  8 04:09 HITS.pool.root.1
[2026-02-08 04:11:00] -rw------- 1 yeti boinc   1177600 Feb  8 04:11 result.tar.gz
04:11:02 (4075560): run_atlas exited; CPU time 22652.851681
04:11:02 (4075560): called boinc_finish(0)

</stderr_txt>
]]>

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