Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:41:32 (4043360): wrapper (7.7.26015): starting
01:41:32 (4043360): wrapper: running run_atlas (--nthreads 4)
[2026-02-08 01:41:32] Arguments: --nthreads 4
[2026-02-08 01:41:32] Threads: 4
[2026-02-08 01:41:32] Checking for CVMFS
[2026-02-08 01:41:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 01:41:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 01:41:32] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 01:41:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 01:41:32] 2.13.1.0 2667185 2592 91284 156001 2 50 9443833 10240000 1822 130560 0 2963660 99.993 96479 307 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-08 01:41:32] CVMFS is ok
[2026-02-08 01:41:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 01:41:33] Checking for apptainer binary...
[2026-02-08 01:41:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 01:41:33] Running /usr/bin/apptainer --version
[2026-02-08 01:41:33] apptainer version 1.4.5
[2026-02-08 01:41:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 01:41:33] ellievl
[2026-02-08 01:41:33] apptainer works
[2026-02-08 01:41:33] Set ATHENA_PROC_NUMBER=4
[2026-02-08 01:41:33] Set ATHENA_CORE_NUMBER=4
[2026-02-08 01:41:33] Starting ATLAS job with PandaID=7000876170
[2026-02-08 01:41:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 03:18:13]  *** The last 200 lines of the pilot log: ***
[2026-02-08 03:18:13]  workdir=None
[2026-02-08 03:18:13] ]
[2026-02-08 03:18:13] 2026-02-08 02:17:05,475 | INFO     | transferring file log.48318042._012233.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-7000876170/log.48318042._012233.job.log.tgz.1 to /var/li
[2026-02-08 03:18:13] 2026-02-08 02:17:05,476 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-7000876170/log.48318042._012233.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-08 03:18:13] 2026-02-08 02:17:05,508 | INFO     | adding to output.list: log.48318042._012233.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/e9/log.48318042._012233.job.log.tg
[2026-02-08 03:18:13] 2026-02-08 02:17:05,510 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 03:18:13] 2026-02-08 02:17:05,510 | INFO     | summary of transferred files:
[2026-02-08 03:18:13] 2026-02-08 02:17:05,510 | INFO     |  -- lfn=log.48318042._012233.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 03:18:13] 2026-02-08 02:17:05,510 | INFO     | stage-out finished correctly
[2026-02-08 03:18:13] 2026-02-08 02:17:05,558 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 03:18:13] 2026-02-08 02:17:05,651 | INFO     | time since job start (5706s) is within the limit (349056.0s)
[2026-02-08 03:18:13] 2026-02-08 02:17:05,685 | WARNING  | process 4052042 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 03:18:13] 2026-02-08 02:17:05,686 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-7000876170/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 03:18:13] 2026-02-08 02:17:05,686 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-7000876170/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 03:18:13] 2026-02-08 02:17:05,687 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-08 03:18:13] 2026-02-08 02:17:05,687 | WARNING  | maxPSS not found in memory monitor output
[2026-02-08 03:18:13] 2026-02-08 02:17:05,687 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2516467 B
[2026-02-08 03:18:13] 2026-02-08 02:17:05,687 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15385 B
[2026-02-08 03:18:13] 2026-02-08 02:17:05,687 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2026-02-08 03:18:13] 2026-02-08 02:17:05,710 | INFO     | sufficient remaining disk space (50427068416 B)
[2026-02-08 03:18:13] 2026-02-08 02:17:05,711 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-08 03:18:13] 2026-02-08 02:17:05,712 | INFO     | size of work directory /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-7000876170: 2820335 B (within 5033164800 B limit)
[2026-02-08 03:18:13] 2026-02-08 02:17:05,713 | INFO     | pfn file=/var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-7000876170/HITS.48318042._012233.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-08 03:18:13] 2026-02-08 02:17:05,713 | INFO     | total size of present files: 0 B (workdir size: 2820335 B)
[2026-02-08 03:18:13] 2026-02-08 02:17:05,713 | INFO     | output file size check: skipping output file /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-7000876170/HITS.48318042._012233.pool.root.1 since it does not exist
[2026-02-08 03:18:13] 2026-02-08 02:17:05,932 | INFO     | number of running child processes to parent process 4052042: 1
[2026-02-08 03:18:13] 2026-02-08 02:17:05,932 | INFO     | maximum number of monitored processes: 6
[2026-02-08 03:18:13] 2026-02-08 02:17:07,658 | INFO     | time since job start (5708s) is within the limit (349056.0s)
[2026-02-08 03:18:13] 2026-02-08 02:17:07,727 | INFO     | job 7000876170 has state=finished
[2026-02-08 03:18:13] 2026-02-08 02:17:07,727 | INFO     | preparing for final server update for job 7000876170 in state='finished'
[2026-02-08 03:18:13] 2026-02-08 02:17:07,728 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-7000876170/jobReport.json
[2026-02-08 03:18:13] 2026-02-08 02:17:07,730 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/3/workernode_map.json
[2026-02-08 03:18:13] 2026-02-08 02:17:07,730 | INFO     | this job has now completed (state=finished)
[2026-02-08 03:18:13] 2026-02-08 02:17:07,730 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 03:18:13] 2026-02-08 02:17:07,730 | INFO     | log transfer has been attempted: DONE
[2026-02-08 03:18:13] 2026-02-08 02:17:07,730 | INFO     | job 7000876170 has finished - writing final server update
[2026-02-08 03:18:13] 2026-02-08 02:17:07,731 | INFO     | total number of processed events: 400 (read)
[2026-02-08 03:18:13] 2026-02-08 02:17:07,733 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-7000876170/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 03:18:13] 2026-02-08 02:17:07,733 | INFO     | extracted standard info from prmon json
[2026-02-08 03:18:13] 2026-02-08 02:17:07,733 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 03:18:13] 2026-02-08 02:17:07,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 03:18:13] 2026-02-08 02:17:07,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 03:18:13] 2026-02-08 02:17:07,734 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 03:18:13] 2026-02-08 02:17:07,735 | INFO     | fitting pss+swap vs Time
[2026-02-08 03:18:13] 2026-02-08 02:17:07,735 | INFO     | sum of square deviations: 197203697.5
[2026-02-08 03:18:13] 2026-02-08 02:17:07,735 | INFO     | sum of deviations: -15009241113.0
[2026-02-08 03:18:13] 2026-02-08 02:17:07,735 | INFO     | mean x: 1770514246.5
[2026-02-08 03:18:13] 2026-02-08 02:17:07,735 | INFO     | mean y: 2424871.0465116277
[2026-02-08 03:18:13] 2026-02-08 02:17:07,735 | INFO     | intersect: 134756871955.99538
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | chi2: 0.10461520795086712
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | current memory leak: -76.11 B/s (using 86 data points, chi2=0.10)
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | ..............................
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | . Timing measurements:
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | . get job = 0 s
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | . initial setup = 9 s
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | . payload setup = 10 s
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | . stage-in = 0 s
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | . payload execution = 5680 s
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | . stage-out = 0 s
[2026-02-08 03:18:13] 2026-02-08 02:17:07,736 | INFO     | . log creation = 0 s
[2026-02-08 03:18:13] 2026-02-08 02:17:07,737 | INFO     | ..............................
[2026-02-08 03:18:13] 2026-02-08 02:17:07,787 | INFO     | 
[2026-02-08 03:18:13] 2026-02-08 02:17:07,787 | INFO     | job summary report
[2026-02-08 03:18:13] 2026-02-08 02:17:07,788 | INFO     | --------------------------------------------------
[2026-02-08 03:18:13] 2026-02-08 02:17:07,788 | INFO     | PanDA job id: 7000876170
[2026-02-08 03:18:13] 2026-02-08 02:17:07,788 | INFO     | task id: 48318042
[2026-02-08 03:18:13] 2026-02-08 02:17:07,788 | INFO     | errors: (none)
[2026-02-08 03:18:13] 2026-02-08 02:17:07,788 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 03:18:13] 2026-02-08 02:17:07,788 | INFO     | pilot state: finished 
[2026-02-08 03:18:13] 2026-02-08 02:17:07,788 | INFO     | transexitcode: 0
[2026-02-08 03:18:13] 2026-02-08 02:17:07,788 | INFO     | exeerrorcode: 0
[2026-02-08 03:18:13] 2026-02-08 02:17:07,788 | INFO     | exeerrordiag: 
[2026-02-08 03:18:13] 2026-02-08 02:17:07,788 | INFO     | exitcode: 0
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | exitmsg: OK
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | cpuconsumptiontime: 21671 s
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | nevents: 400
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | neventsw: 0
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | pid: 4052042
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | pgrp: 4052042
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | corecount: 4
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | event service: False
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | sizes: {0: 2282912, 1: 2283118, 11: 2283146, 5694: 2309676, 5695: 2318758, 5697: 2318924}
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | --------------------------------------------------
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | 
[2026-02-08 03:18:13] 2026-02-08 02:17:07,789 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2026-02-08 03:18:13] 2026-02-08 02:17:07,819 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,820 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,820 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,820 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,820 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,820 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,820 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,820 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,821 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 03:18:13] 2026-02-08 02:17:07,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,821 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 03:18:13] 2026-02-08 02:17:07,821 | INFO     | job 7000876170 has completed (purged errors)
[2026-02-08 03:18:13] 2026-02-08 02:17:07,822 | INFO     | overall cleanup function is called
[2026-02-08 03:18:13] 2026-02-08 02:17:08,830 | INFO     | --- collectZombieJob: --- 10, [4052042]
[2026-02-08 03:18:13] 2026-02-08 02:17:08,830 | INFO     | zombie collector waiting for pid 4052042
[2026-02-08 03:18:13] 2026-02-08 02:17:08,830 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 03:18:13] 2026-02-08 02:17:08,830 | INFO     | collected zombie processes
[2026-02-08 03:18:13] 2026-02-08 02:17:08,830 | INFO     | will attempt to kill all subprocesses of pid=4052042
[2026-02-08 03:18:13] 2026-02-08 02:17:09,087 | INFO     | PID=4047478 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 03:18:13] 2026-02-08 02:17:09,087 | INFO     | .. there are 3 such processes running
[2026-02-08 03:18:13] 2026-02-08 02:17:09,228 | INFO     | process IDs to be killed: [4052042] (in reverse order)
[2026-02-08 03:18:13] 2026-02-08 02:17:09,315 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 03:18:13] 2026-02-08 02:17:09,316 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 03:18:13] 2026-02-08 02:17:09,321 | INFO     | did not find any defunct processes belonging to 4052042
[2026-02-08 03:18:13] 2026-02-08 02:17:09,326 | INFO     | did not find any defunct processes belonging to 4052042
[2026-02-08 03:18:13] 2026-02-08 02:17:09,326 | INFO     | ready for new job
[2026-02-08 03:18:13] 2026-02-08 02:17:09,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 03:18:13] 2026-02-08 02:17:09,329 | INFO     | **************************************
[2026-02-08 03:18:13] 2026-02-08 02:17:09,329 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 03:18:13] 2026-02-08 02:17:09,329 | INFO     | **************************************
[2026-02-08 03:18:13] 2026-02-08 02:17:09,329 | INFO     | 
[2026-02-08 03:18:13] 2026-02-08 02:17:09,330 | INFO     | pilot is running in a VM
[2026-02-08 03:18:13] 2026-02-08 02:17:09,330 | INFO     | architecture information:
[2026-02-08 03:18:13] 2026-02-08 02:17:09,330 | INFO     | executing command: cat /etc/os-release
[2026-02-08 03:18:13] 2026-02-08 02:17:09,351 | INFO     | cat /etc/os-release:
[2026-02-08 03:18:13] NAME="CentOS Linux"
[2026-02-08 03:18:13] VERSION="7 (Core)"
[2026-02-08 03:18:13] ID="centos"
[2026-02-08 03:18:13] ID_LIKE="rhel fedora"
[2026-02-08 03:18:13] VERSION_ID="7"
[2026-02-08 03:18:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 03:18:13] ANSI_COLOR="0;31"
[2026-02-08 03:18:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 03:18:13] HOME_URL="https://www.centos.org/"
[2026-02-08 03:18:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 03:18:13] 
[2026-02-08 03:18:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 03:18:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 03:18:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 03:18:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 03:18:13] 
[2026-02-08 03:18:13] 2026-02-08 02:17:09,352 | INFO     | **************************************
[2026-02-08 03:18:13] 2026-02-08 02:17:09,855 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2026-02-08 03:18:13] 2026-02-08 02:17:09,875 | INFO     | sufficient remaining disk space (50430214144 B)
[2026-02-08 03:18:13] 2026-02-08 02:17:09,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 03:18:13] 2026-02-08 02:17:09,876 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 03:18:13] 2026-02-08 02:17:09,876 | INFO     | update_server=False
[2026-02-08 03:18:13] 2026-02-08 02:17:09,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 03:18:13] 2026-02-08 02:17:09,877 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-08 03:18:13] 2026-02-08 02:17:09,877 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 03:18:13] 2026-02-08 02:17:09,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 03:18:13] 2026-02-08 02:17:09,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 03:18:13] 2026-02-08 02:17:09,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 03:18:13] 2026-02-08 02:17:09,878 | INFO     | aborting loop
[2026-02-08 03:18:13] 2026-02-08 02:17:10,069 | INFO     | all job control threads have been joined
[2026-02-08 03:18:13] 2026-02-08 02:17:10,095 | INFO     | all data control threads have been joined
[2026-02-08 03:18:13] 2026-02-08 02:17:10,103 | INFO     | all payload control threads have been joined
[2026-02-08 03:18:13] 2026-02-08 02:17:10,883 | INFO     | [job] retrieve thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:10,884 | INFO     | [job] job monitor thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:10,935 | INFO     | [job] validate thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:11,062 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:11,069 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 03:18:13] 2026-02-08 02:17:11,074 | INFO     | [job] control thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:11,101 | INFO     | [data] control thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:11,108 | INFO     | [payload] control thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:11,180 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:11,345 | INFO     | [data] copytool_in thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:11,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 03:18:13] 2026-02-08 02:17:11,844 | INFO     | [payload] failed_post thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:11,967 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:12,405 | INFO     | [payload] validate_post thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:12,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 03:18:13] 2026-02-08 02:17:13,076 | INFO     | [data] copytool_out thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:13,806 | INFO     | [job] queue monitor thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:15,615 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:17:20,699 | INFO     | job.realtimelogging is not enabled
[2026-02-08 03:18:13] 2026-02-08 02:17:21,705 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 03:18:13] 2026-02-08 02:18:07,123 | INFO     | [monitor] cgroup control has ended
[2026-02-08 03:18:13] 2026-02-08 02:18:08,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131691881768768)>', '<ExcThread(monitor, started 131690735331072)>']
[2026-02-08 03:18:13] 2026-02-08 02:18:08,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 03:18:13] 2026-02-08 02:18:08,186 | INFO     | [monitor] control thread has ended
[2026-02-08 03:18:13] 2026-02-08 02:18:13,090 | INFO     | all workflow threads have been joined
[2026-02-08 03:18:13] 2026-02-08 02:18:13,090 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 03:18:13] 2026-02-08 02:18:13,091 | INFO     | traces error code: 0
[2026-02-08 03:18:13] 2026-02-08 02:18:13,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 03:18:13] 2026-02-08 02:18:13,207 [wrapper] ==== pilot stdout END ====
[2026-02-08 03:18:13] 2026-02-08 02:18:13,213 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 03:18:13] 2026-02-08 02:18:13,220 [wrapper] pilotpid: 4047478
[2026-02-08 03:18:13] 2026-02-08 02:18:13,227 [wrapper] Pilot exit status: 0
[2026-02-08 03:18:13] 2026-02-08 02:18:13,253 [wrapper] pandaids: 7000876170
[2026-02-08 03:18:13] 2026-02-08 02:18:13,333 [wrapper] cleanup supervisor_pilot 4095159 4047479
[2026-02-08 03:18:13] 2026-02-08 02:18:13,341 [wrapper] Test setup, not cleaning
[2026-02-08 03:18:13] 2026-02-08 02:18:13,348 [wrapper] apfmon messages muted
[2026-02-08 03:18:13] 2026-02-08 02:18:13,355 [wrapper] ==== wrapper stdout END ====
[2026-02-08 03:18:13] 2026-02-08 02:18:13,362 [wrapper] ==== wrapper stderr END ====
[2026-02-08 03:18:13]  *** Error codes and diagnostics ***
[2026-02-08 03:18:13]     "exeErrorCode": 0,
[2026-02-08 03:18:13]     "exeErrorDiag": "",
[2026-02-08 03:18:13]     "pilotErrorCode": 0,
[2026-02-08 03:18:13]     "pilotErrorDiag": "",
[2026-02-08 03:18:13]  *** Listing of results directory ***
[2026-02-08 03:18:13] insgesamt 672588
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc    584627 Feb  7 19:32 pilot3.tar.gz
[2026-02-08 03:18:13] -rwx------ 1 yeti boinc     36322 Feb  7 19:34 runpilot2-wrapper.sh
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc      5111 Feb  7 19:35 queuedata.json
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc       100 Feb  8 01:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 03:18:13] -rwxr-xr-x 1 yeti boinc      7986 Feb  8 01:41 run_atlas
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc       105 Feb  8 01:41 job.xml
[2026-02-08 03:18:13] -rw-r--r-- 2 yeti boinc 496647690 Feb  8 01:41 EVNT.48318040._000235.pool.root.1
[2026-02-08 03:18:13] -rw-r--r-- 2 yeti boinc     15845 Feb  8 01:41 start_atlas.sh
[2026-02-08 03:18:13] drwxrwx--x 2 yeti boinc      4096 Feb  8 01:41 shared
[2026-02-08 03:18:13] -rw-r--r-- 2 yeti boinc    597961 Feb  8 01:41 input.tar.gz
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc      6558 Feb  8 01:41 init_data.xml
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc         0 Feb  8 01:41 boinc_setup_complete
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc         0 Feb  8 01:41 boinc_lockfile
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc      2537 Feb  8 01:41 pandaJob.out
[2026-02-08 03:18:13] -rw------- 1 yeti boinc        52 Feb  8 01:41 setup.sh.local
[2026-02-08 03:18:13] -rw------- 1 yeti boinc   1009502 Feb  8 01:41 agis_schedconf.cvmfs.json
[2026-02-08 03:18:13] -rw------- 1 yeti boinc   1513088 Feb  8 01:41 agis_ddmendpoints.agis.ALL.json
[2026-02-08 03:18:13] -rw------- 1 yeti boinc       419 Feb  8 01:41 workernode_map.json
[2026-02-08 03:18:13] drwx------ 5 yeti boinc      4096 Feb  8 01:41 pilot3
[2026-02-08 03:18:13] -rw------- 1 yeti boinc        95 Feb  8 03:16 pilot_heartbeat.json
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc       531 Feb  8 03:16 boinc_task_state.xml
[2026-02-08 03:18:13] -rw------- 1 yeti boinc 185895593 Feb  8 03:16 HITS.48318042._012233.pool.root.1
[2026-02-08 03:18:13] -rw------- 1 yeti boinc      1023 Feb  8 03:17 memory_monitor_summary.json
[2026-02-08 03:18:13] -rw------- 1 yeti boinc    283374 Feb  8 03:17 log.48318042._012233.job.log.tgz.1
[2026-02-08 03:18:13] -rw------- 1 yeti boinc      6276 Feb  8 03:17 heartbeat.json
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc      8192 Feb  8 03:18 boinc_mmap_file
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc        27 Feb  8 03:18 wrapper_checkpoint.txt
[2026-02-08 03:18:13] -rw------- 1 yeti boinc      4696 Feb  8 03:18 pilotlog.txt
[2026-02-08 03:18:13] -rw------- 1 yeti boinc    839396 Feb  8 03:18 log.48318042._012233.job.log.1
[2026-02-08 03:18:13] -rw------- 1 yeti boinc       357 Feb  8 03:18 output.list
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc       620 Feb  8 03:18 runtime_log
[2026-02-08 03:18:13] -rw------- 1 yeti boinc   1136640 Feb  8 03:18 result.tar.gz
[2026-02-08 03:18:13] -rw------- 1 yeti boinc       637 Feb  8 03:18 vomKDmHJ288n9Rq4apOajLDm4fhM0noT9bVooX4SDmiQbKDmCCYOem.diag
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc      9536 Feb  8 03:18 runtime_log.err
[2026-02-08 03:18:13] -rw-r--r-- 1 yeti boinc     22380 Feb  8 03:18 stderr.txt
[2026-02-08 03:18:13] HITS file was successfully produced:
[2026-02-08 03:18:13] -rw------- 1 yeti boinc 185895593 Feb  8 03:16 shared/HITS.pool.root.1
[2026-02-08 03:18:13]  *** Contents of shared directory: ***
[2026-02-08 03:18:13] insgesamt 668268
[2026-02-08 03:18:13] -rw-r--r-- 2 yeti boinc 496647690 Feb  8 01:41 ATLAS.root_0
[2026-02-08 03:18:13] -rw-r--r-- 2 yeti boinc     15845 Feb  8 01:41 start_atlas.sh
[2026-02-08 03:18:13] -rw-r--r-- 2 yeti boinc    597961 Feb  8 01:41 input.tar.gz
[2026-02-08 03:18:13] -rw------- 1 yeti boinc 185895593 Feb  8 03:16 HITS.pool.root.1
[2026-02-08 03:18:13] -rw------- 1 yeti boinc   1136640 Feb  8 03:18 result.tar.gz
03:18:15 (4043360): run_atlas exited; CPU time 21910.326116
03:18:15 (4043360): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN