Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:41:56 (20743): wrapper (7.7.26015): starting
17:41:56 (20743): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 17:41:56] Arguments: --nthreads 12
[2026-02-07 17:41:56] Threads: 12
[2026-02-07 17:41:56] Checking for CVMFS
[2026-02-07 17:41:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 17:41:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 17:41:57] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 17:41:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 17:41:57] 2.11.2.0 2987 393369 94672 155998 0 50 19778389 20275200 1 130560 1 168315501 99.945 24430297 16829 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 17:41:57] CVMFS is ok
[2026-02-07 17:41:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 17:41:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 17:41:57] Further information can be found at the LHC@home message board.
[2026-02-07 17:41:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 17:41:57] Checking for apptainer binary...
[2026-02-07 17:41:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 17:41:57] Running /usr/bin/apptainer --version
[2026-02-07 17:41:57] apptainer version 1.3.2-1.el7
[2026-02-07 17:41:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 17:41:58] c-205-19.aglt2.org
[2026-02-07 17:41:58] apptainer works
[2026-02-07 17:41:58] Set ATHENA_PROC_NUMBER=12
[2026-02-07 17:41:58] Set ATHENA_CORE_NUMBER=12
[2026-02-07 17:41:58] Starting ATLAS job with PandaID=7000833324
[2026-02-07 17:41:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:11:27 (8520): wrapper (7.7.26015): starting
18:11:27 (8520): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 18:11:27] Arguments: --nthreads 12
[2026-02-07 18:11:27] Threads: 12
[2026-02-07 18:11:27] This job has been restarted, cleaning up previous attempt
[2026-02-07 18:11:27] Checking for CVMFS
[2026-02-07 18:11:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 18:11:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 18:11:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 18:11:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 18:11:28] 2.11.2.0 2987 393399 94668 155999 3 1 19817004 20275200 1 130560 1 168365863 99.945 24432070 16830 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 18:11:28] CVMFS is ok
[2026-02-07 18:11:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 18:11:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 18:11:28] Further information can be found at the LHC@home message board.
[2026-02-07 18:11:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 18:11:28] Checking for apptainer binary...
[2026-02-07 18:11:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 18:11:28] Running /usr/bin/apptainer --version
[2026-02-07 18:11:28] apptainer version 1.3.2-1.el7
[2026-02-07 18:11:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 18:11:30] c-205-19.aglt2.org
[2026-02-07 18:11:30] apptainer works
[2026-02-07 18:11:30] Set ATHENA_PROC_NUMBER=12
[2026-02-07 18:11:30] Set ATHENA_CORE_NUMBER=12
[2026-02-07 18:11:30] Starting ATLAS job with PandaID=7000833324
[2026-02-07 18:11:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 19:23:08]  *** The last 200 lines of the pilot log: ***
[2026-02-07 19:23:08]  guid=d7caf807-a6ce-48bc-bc51-a01978be04f4
[2026-02-07 19:23:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 19:23:08]  is_altstaged=None
[2026-02-07 19:23:08]  is_tar=False
[2026-02-07 19:23:08]  lfn=log.48442098._004354.job.log.tgz.1
[2026-02-07 19:23:08]  mtime=0
[2026-02-07 19:23:08]  protocol_id=None
[2026-02-07 19:23:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 19:23:08]  replicas=None
[2026-02-07 19:23:08]  scope=mc23_13p6TeV
[2026-02-07 19:23:08]  status=None
[2026-02-07 19:23:08]  status_code=0
[2026-02-07 19:23:08]  storage_token=
[2026-02-07 19:23:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7000833324/log.48442098._004354.job.log.tgz.1
[2026-02-07 19:23:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/70/log.48442098._004354.job.log.tgz.1
[2026-02-07 19:23:08]  workdir=None
[2026-02-07 19:23:08] ]
[2026-02-07 19:23:08] 2026-02-08 00:22:33,277 | INFO     | transferring file log.48442098._004354.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7000833324/log.48442098._004354.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 19:23:08] 2026-02-08 00:22:33,277 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7000833324/log.48442098._004354.job.log.tgz.1 /tmp/boinchome/slots/0/log.48442098._004354.job
[2026-02-07 19:23:08] 2026-02-08 00:22:33,298 | INFO     | adding to output.list: log.48442098._004354.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/70/log.48442098._004354.job.log.tg
[2026-02-07 19:23:08] 2026-02-08 00:22:33,299 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 19:23:08] 2026-02-08 00:22:33,299 | INFO     | summary of transferred files:
[2026-02-07 19:23:08] 2026-02-08 00:22:33,299 | INFO     |  -- lfn=log.48442098._004354.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 19:23:08] 2026-02-08 00:22:33,300 | INFO     | stage-out finished correctly
[2026-02-07 19:23:08] 2026-02-08 00:22:34,800 | INFO     | time since job start (4249s) is within the limit (349056.0s)
[2026-02-07 19:23:08] 2026-02-08 00:22:35,478 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 19:23:08] 2026-02-08 00:22:35,557 | INFO     | job 7000833324 has state=finished
[2026-02-07 19:23:08] 2026-02-08 00:22:35,557 | INFO     | preparing for final server update for job 7000833324 in state='finished'
[2026-02-07 19:23:08] 2026-02-08 00:22:35,558 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7000833324/jobReport.json
[2026-02-07 19:23:08] 2026-02-08 00:22:35,560 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-07 19:23:08] 2026-02-08 00:22:35,561 | INFO     | this job has now completed (state=finished)
[2026-02-07 19:23:08] 2026-02-08 00:22:35,561 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 19:23:08] 2026-02-08 00:22:35,561 | INFO     | log transfer has been attempted: DONE
[2026-02-07 19:23:08] 2026-02-08 00:22:35,562 | INFO     | job 7000833324 has finished - writing final server update
[2026-02-07 19:23:08] 2026-02-08 00:22:35,562 | INFO     | total number of processed events: 400 (read)
[2026-02-07 19:23:08] 2026-02-08 00:22:35,565 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7000833324/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 19:23:08] 2026-02-08 00:22:35,565 | INFO     | extracted standard info from prmon json
[2026-02-07 19:23:08] 2026-02-08 00:22:35,566 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 19:23:08] 2026-02-08 00:22:35,566 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 19:23:08] 2026-02-08 00:22:35,566 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 19:23:08] 2026-02-08 00:22:35,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 19:23:08] 2026-02-08 00:22:35,568 | INFO     | fitting pss+swap vs Time
[2026-02-07 19:23:08] 2026-02-08 00:22:35,568 | INFO     | sum of square deviations: 77515872.0
[2026-02-07 19:23:08] 2026-02-08 00:22:35,568 | INFO     | sum of deviations: 2949118077.9999995
[2026-02-07 19:23:08] 2026-02-08 00:22:35,568 | INFO     | mean x: 1770508125.0
[2026-02-07 19:23:08] 2026-02-08 00:22:35,568 | INFO     | mean y: 2689768.904761905
[2026-02-07 19:23:08] 2026-02-08 00:22:35,568 | INFO     | intersect: -67356902324.48461
[2026-02-07 19:23:08] 2026-02-08 00:22:35,569 | INFO     | chi2: 0.08612892560419051
[2026-02-07 19:23:08] 2026-02-08 00:22:35,569 | INFO     | current memory leak: 38.05 B/s (using 63 data points, chi2=0.09)
[2026-02-07 19:23:08] 2026-02-08 00:22:35,569 | INFO     | could have reported an average CPU frequency of 1718 MHz (6 samples)
[2026-02-07 19:23:08] 2026-02-08 00:22:35,569 | INFO     | ..............................
[2026-02-07 19:23:08] 2026-02-08 00:22:35,569 | INFO     | . Timing measurements:
[2026-02-07 19:23:08] 2026-02-08 00:22:35,569 | INFO     | . get job = 0 s
[2026-02-07 19:23:08] 2026-02-08 00:22:35,569 | INFO     | . initial setup = 1 s
[2026-02-07 19:23:08] 2026-02-08 00:22:35,570 | INFO     | . payload setup = 7 s
[2026-02-07 19:23:08] 2026-02-08 00:22:35,570 | INFO     | . stage-in = 0 s
[2026-02-07 19:23:08] 2026-02-08 00:22:35,570 | INFO     | . payload execution = 4225 s
[2026-02-07 19:23:08] 2026-02-08 00:22:35,570 | INFO     | . stage-out = 0 s
[2026-02-07 19:23:08] 2026-02-08 00:22:35,570 | INFO     | . log creation = 0 s
[2026-02-07 19:23:08] 2026-02-08 00:22:35,570 | INFO     | ..............................
[2026-02-07 19:23:08] 2026-02-08 00:22:35,648 | INFO     | 
[2026-02-07 19:23:08] 2026-02-08 00:22:35,648 | INFO     | job summary report
[2026-02-07 19:23:08] 2026-02-08 00:22:35,648 | INFO     | --------------------------------------------------
[2026-02-07 19:23:08] 2026-02-08 00:22:35,648 | INFO     | PanDA job id: 7000833324
[2026-02-07 19:23:08] 2026-02-08 00:22:35,648 | INFO     | task id: 48442098
[2026-02-07 19:23:08] 2026-02-08 00:22:35,649 | INFO     | errors: (none)
[2026-02-07 19:23:08] 2026-02-08 00:22:35,649 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 19:23:08] 2026-02-08 00:22:35,649 | INFO     | pilot state: finished 
[2026-02-07 19:23:08] 2026-02-08 00:22:35,649 | INFO     | transexitcode: 0
[2026-02-07 19:23:08] 2026-02-08 00:22:35,649 | INFO     | exeerrorcode: 0
[2026-02-07 19:23:08] 2026-02-08 00:22:35,649 | INFO     | exeerrordiag: 
[2026-02-07 19:23:08] 2026-02-08 00:22:35,650 | INFO     | exitcode: 0
[2026-02-07 19:23:08] 2026-02-08 00:22:35,650 | INFO     | exitmsg: OK
[2026-02-07 19:23:08] 2026-02-08 00:22:35,650 | INFO     | cpuconsumptiontime: 43750 s
[2026-02-07 19:23:08] 2026-02-08 00:22:35,650 | INFO     | nevents: 400
[2026-02-07 19:23:08] 2026-02-08 00:22:35,650 | INFO     | neventsw: 0
[2026-02-07 19:23:08] 2026-02-08 00:22:35,650 | INFO     | pid: 15075
[2026-02-07 19:23:08] 2026-02-08 00:22:35,651 | INFO     | pgrp: 15075
[2026-02-07 19:23:08] 2026-02-08 00:22:35,651 | INFO     | corecount: 12
[2026-02-07 19:23:08] 2026-02-08 00:22:35,651 | INFO     | event service: False
[2026-02-07 19:23:08] 2026-02-08 00:22:35,651 | INFO     | sizes: {0: 2282003, 1: 2283121, 12: 2283121, 4236: 2318012, 4239: 2318206}
[2026-02-07 19:23:08] 2026-02-08 00:22:35,651 | INFO     | --------------------------------------------------
[2026-02-07 19:23:08] 2026-02-08 00:22:35,651 | INFO     | 
[2026-02-07 19:23:08] 2026-02-08 00:22:35,652 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 19:23:08] 2026-02-08 00:22:35,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,675 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,676 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,676 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,678 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 19:23:08] 2026-02-08 00:22:35,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,678 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 19:23:08] 2026-02-08 00:22:35,678 | INFO     | job 7000833324 has completed (purged errors)
[2026-02-07 19:23:08] 2026-02-08 00:22:35,679 | INFO     | overall cleanup function is called
[2026-02-07 19:23:08] 2026-02-08 00:22:36,687 | INFO     | --- collectZombieJob: --- 10, [15075]
[2026-02-07 19:23:08] 2026-02-08 00:22:36,687 | INFO     | zombie collector waiting for pid 15075
[2026-02-07 19:23:08] 2026-02-08 00:22:36,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 19:23:08] 2026-02-08 00:22:36,687 | INFO     | collected zombie processes
[2026-02-07 19:23:08] 2026-02-08 00:22:36,688 | INFO     | will attempt to kill all subprocesses of pid=15075
[2026-02-07 19:23:08] 2026-02-08 00:22:36,778 | INFO     | process IDs to be killed: [15075] (in reverse order)
[2026-02-07 19:23:08] 2026-02-08 00:22:36,834 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 19:23:08] 2026-02-08 00:22:36,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 19:23:08] 2026-02-08 00:22:36,838 | INFO     | did not find any defunct processes belonging to 15075
[2026-02-07 19:23:08] 2026-02-08 00:22:36,840 | INFO     | did not find any defunct processes belonging to 15075
[2026-02-07 19:23:08] 2026-02-08 00:22:36,840 | INFO     | ready for new job
[2026-02-07 19:23:08] 2026-02-08 00:22:36,840 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 19:23:08] 2026-02-08 00:22:36,841 | INFO     | **************************************
[2026-02-07 19:23:08] 2026-02-08 00:22:36,841 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 19:23:08] 2026-02-08 00:22:36,841 | INFO     | **************************************
[2026-02-07 19:23:08] 2026-02-08 00:22:36,841 | INFO     | 
[2026-02-07 19:23:08] 2026-02-08 00:22:36,842 | INFO     | architecture information:
[2026-02-07 19:23:08] 2026-02-08 00:22:36,842 | INFO     | executing command: cat /etc/os-release
[2026-02-07 19:23:08] 2026-02-08 00:22:36,857 | INFO     | cat /etc/os-release:
[2026-02-07 19:23:08] NAME="CentOS Linux"
[2026-02-07 19:23:08] VERSION="7 (Core)"
[2026-02-07 19:23:08] ID="centos"
[2026-02-07 19:23:08] ID_LIKE="rhel fedora"
[2026-02-07 19:23:08] VERSION_ID="7"
[2026-02-07 19:23:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 19:23:08] ANSI_COLOR="0;31"
[2026-02-07 19:23:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 19:23:08] HOME_URL="https://www.centos.org/"
[2026-02-07 19:23:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 19:23:08] 
[2026-02-07 19:23:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 19:23:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 19:23:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 19:23:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 19:23:08] 
[2026-02-07 19:23:08] 2026-02-08 00:22:36,858 | INFO     | **************************************
[2026-02-07 19:23:08] 2026-02-08 00:22:37,361 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 19:23:08] 2026-02-08 00:22:37,389 | INFO     | sufficient remaining disk space (28816965632 B)
[2026-02-07 19:23:08] 2026-02-08 00:22:37,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 19:23:08] 2026-02-08 00:22:37,389 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 19:23:08] 2026-02-08 00:22:37,389 | INFO     | update_server=False
[2026-02-07 19:23:08] 2026-02-08 00:22:37,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 19:23:08] 2026-02-08 00:22:37,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 19:23:08] 2026-02-08 00:22:37,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 19:23:08] 2026-02-08 00:22:37,457 | WARNING  | process 15075 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 19:23:08] 2026-02-08 00:22:37,530 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 19:23:08] 2026-02-08 00:22:37,540 | INFO     | all payload control threads have been joined
[2026-02-07 19:23:08] 2026-02-08 00:22:37,604 | INFO     | all data control threads have been joined
[2026-02-07 19:23:08] 2026-02-08 00:22:37,617 | INFO     | number of running child processes to parent process 15075: 1
[2026-02-07 19:23:08] 2026-02-08 00:22:37,618 | INFO     | maximum number of monitored processes: 6
[2026-02-07 19:23:08] 2026-02-08 00:22:37,618 | INFO     | aborting job monitoring since job object (job id=7000833324) has expired
[2026-02-07 19:23:08] 2026-02-08 00:22:37,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 19:23:08] 2026-02-08 00:22:37,618 | INFO     | will abort loop
[2026-02-07 19:23:08] 2026-02-08 00:22:37,708 | INFO     | all job control threads have been joined
[2026-02-07 19:23:08] 2026-02-08 00:22:38,395 | INFO     | [job] retrieve thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:38,396 | INFO     | [job] queue monitor thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:38,542 | INFO     | [payload] control thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:38,607 | INFO     | [data] control thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:38,623 | INFO     | [job] job monitor thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:38,713 | INFO     | [job] control thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:38,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 19:23:08] 2026-02-08 00:22:38,968 | INFO     | [data] copytool_in thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:39,500 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:39,820 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:39,859 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:39,863 | INFO     | [job] validate thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:39,912 | INFO     | [payload] failed_post thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:39,974 | INFO     | [payload] validate_post thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:40,896 | INFO     | [data] copytool_out thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:41,397 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:48,013 | INFO     | job.realtimelogging is not enabled
[2026-02-07 19:23:08] 2026-02-08 00:22:49,019 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 19:23:08] 2026-02-08 00:22:51,353 | INFO     | [monitor] cgroup control has ended
[2026-02-07 19:23:08] 2026-02-08 00:22:52,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139683766327104)>', '<ExcThread(monitor, started 139682604119808)>']
[2026-02-07 19:23:08] 2026-02-08 00:22:57,889 | INFO     | all workflow threads have been joined
[2026-02-07 19:23:08] 2026-02-08 00:22:57,889 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 19:23:08] 2026-02-08 00:22:57,889 | INFO     | traces error code: 0
[2026-02-07 19:23:08] 2026-02-08 00:22:57,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 19:23:08] 2026-02-08 00:23:08,002 | INFO     | PID=12597 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 19:23:08] 2026-02-08 00:23:08,003 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 19:23:08] 2026-02-08 00:23:08,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 19:23:08] 2026-02-08 00:23:08,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 19:23:08] 2026-02-08 00:23:08,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 19:23:08] 2026-02-08 00:23:08,004 | INFO     | [monitor] control thread has ended
[2026-02-07 19:23:08] 2026-02-08 00:23:08,087 [wrapper] ==== pilot stdout END ====
[2026-02-07 19:23:08] 2026-02-08 00:23:08,091 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 19:23:08] 2026-02-08 00:23:08,095 [wrapper] pilotpid: 12597
[2026-02-07 19:23:08] 2026-02-08 00:23:08,099 [wrapper] Pilot exit status: 0
[2026-02-07 19:23:08] 2026-02-08 00:23:08,115 [wrapper] pandaids: 7000833324 7000833324
[2026-02-07 19:23:08] 2026-02-08 00:23:08,157 [wrapper] cleanup supervisor_pilot  1060 12598
[2026-02-07 19:23:08] 2026-02-08 00:23:08,161 [wrapper] Test setup, not cleaning
[2026-02-07 19:23:08] 2026-02-08 00:23:08,165 [wrapper] apfmon messages muted
[2026-02-07 19:23:08] 2026-02-08 00:23:08,169 [wrapper] ==== wrapper stdout END ====
[2026-02-07 19:23:08] 2026-02-08 00:23:08,173 [wrapper] ==== wrapper stderr END ====
[2026-02-07 19:23:08]  *** Error codes and diagnostics ***
[2026-02-07 19:23:08]     "exeErrorCode": 0,
[2026-02-07 19:23:08]     "exeErrorDiag": "",
[2026-02-07 19:23:08]     "pilotErrorCode": 0,
[2026-02-07 19:23:08]     "pilotErrorDiag": "",
[2026-02-07 19:23:08]  *** Listing of results directory ***
[2026-02-07 19:23:08] total 1141372
[2026-02-07 19:23:08] drwx------ 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-07 19:23:08] -rwx------ 1 boincer umatlas     36322 Feb  7 08:37 runpilot2-wrapper.sh
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas    584627 Feb  7 08:39 pilot3.tar.gz
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas      5111 Feb  7 08:42 queuedata.json
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas       100 Feb  7 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 19:23:08] -rwxr-xr-x 1 boincer umatlas      7986 Feb  7 17:41 run_atlas
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas       105 Feb  7 17:41 job.xml
[2026-02-07 19:23:08] -rw-r--r-- 3 boincer umatlas 491877557 Feb  7 17:41 EVNT.48442096._000087.pool.root.1
[2026-02-07 19:23:08] -rw-r--r-- 3 boincer umatlas 491877557 Feb  7 17:41 ATLAS.root_0
[2026-02-07 19:23:08] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 17:41 start_atlas.sh
[2026-02-07 19:23:08] drwxrwx--x 2 boincer umatlas      4096 Feb  7 17:41 shared
[2026-02-07 19:23:08] -rw-r--r-- 2 boincer umatlas    597957 Feb  7 17:41 input.tar.gz
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas         0 Feb  7 17:41 boinc_lockfile
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas   1513088 Feb  7 17:42 agis_ddmendpoints.agis.ALL.json
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas      2528 Feb  7 18:11 pandaJob.out
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas        57 Feb  7 18:11 setup.sh.local
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas   1009502 Feb  7 18:11 agis_schedconf.cvmfs.json
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas       433 Feb  7 18:11 workernode_map.json
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas      5952 Feb  7 19:20 init_data.xml
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas 179027964 Feb  7 19:22 HITS.48442098._004354.pool.root.1
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas       530 Feb  7 19:22 boinc_task_state.xml
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas      1046 Feb  7 19:22 memory_monitor_summary.json
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas    394519 Feb  7 19:22 log.48442098._004354.job.log.tgz.1
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas      6399 Feb  7 19:22 heartbeat.json
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas        27 Feb  7 19:22 wrapper_checkpoint.txt
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas      8192 Feb  7 19:22 boinc_mmap_file
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas        96 Feb  7 19:23 pilot_heartbeat.json
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas       745 Feb  7 19:23 pilotlog.txt
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas    620653 Feb  7 19:23 log.48442098._004354.job.log.1
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas       357 Feb  7 19:23 output.list
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas       620 Feb  7 19:23 runtime_log
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas   1034240 Feb  7 19:23 result.tar.gz
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas       785 Feb  7 19:23 UImKDmufx88n9Rq4apOajLDm4fhM0noT9bVooX4SDmTAbKDmWWz8tn.diag
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas      9428 Feb  7 19:23 runtime_log.err
[2026-02-07 19:23:08] -rw-r--r-- 1 boincer umatlas     23498 Feb  7 19:23 stderr.txt
[2026-02-07 19:23:08] HITS file was successfully produced:
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas 179027964 Feb  7 19:22 shared/HITS.pool.root.1
[2026-02-07 19:23:08]  *** Contents of shared directory: ***
[2026-02-07 19:23:08] total 656804
[2026-02-07 19:23:08] -rw-r--r-- 3 boincer umatlas 491877557 Feb  7 17:41 ATLAS.root_0
[2026-02-07 19:23:08] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 17:41 start_atlas.sh
[2026-02-07 19:23:08] -rw-r--r-- 2 boincer umatlas    597957 Feb  7 17:41 input.tar.gz
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas 179027964 Feb  7 19:22 HITS.pool.root.1
[2026-02-07 19:23:08] -rw------- 1 boincer umatlas   1034240 Feb  7 19:23 result.tar.gz
19:23:10 (8520): run_atlas exited; CPU time 43732.671746
19:23:10 (8520): called boinc_finish(0)

</stderr_txt>
]]>

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