Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:47:22 (10801): wrapper (7.7.26015): starting
02:47:22 (10801): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 02:47:22] Arguments: --nthreads 8
[2026-02-08 02:47:22] Threads: 8
[2026-02-08 02:47:22] Checking for CVMFS
[2026-02-08 02:47:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 02:47:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 02:47:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 02:47:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 02:47:22] 2.11.0.0 5873 172077 88032 156002 0 188 3576658 4096000 1834 130560 2 10945620 99.416 12489916 522 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-08 02:47:22] CVMFS is ok
[2026-02-08 02:47:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 02:47:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 02:47:22] Further information can be found at the LHC@home message board.
[2026-02-08 02:47:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 02:47:22] Checking for apptainer binary...
[2026-02-08 02:47:22] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-08 02:47:22] apptainer is not installed, using version from CVMFS
[2026-02-08 02:47:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 02:47:23] WARNING: Environment variable TMPDIR already has value [/tmp/job_11082573/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node289
[2026-02-08 02:47:23] apptainer works
[2026-02-08 02:47:23] Set ATHENA_PROC_NUMBER=8
[2026-02-08 02:47:23] Set ATHENA_CORE_NUMBER=8
[2026-02-08 02:47:23] Starting ATLAS job with PandaID=7000833974
[2026-02-08 02:47:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11082573/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 03:38:49]  *** The last 200 lines of the pilot log: ***
[2026-02-08 03:38:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 03:38:49]  is_altstaged=None
[2026-02-08 03:38:49]  is_tar=False
[2026-02-08 03:38:49]  lfn=log.48442031._003643.job.log.tgz.1
[2026-02-08 03:38:49]  mtime=0
[2026-02-08 03:38:49]  protocol_id=None
[2026-02-08 03:38:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 03:38:49]  replicas=None
[2026-02-08 03:38:49]  scope=mc23_13p6TeV
[2026-02-08 03:38:49]  status=None
[2026-02-08 03:38:49]  status_code=0
[2026-02-08 03:38:49]  storage_token=
[2026-02-08 03:38:49]  surl=/tmp/job_11082573/atlas/pilot/slots/0/PanDA_Pilot-7000833974/log.48442031._003643.job.log.tgz.1
[2026-02-08 03:38:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/9f/log.48442031._003643.job.log.tgz.1
[2026-02-08 03:38:49]  workdir=None
[2026-02-08 03:38:49] ]
[2026-02-08 03:38:49] 2026-02-08 02:38:15,834 | INFO     | transferring file log.48442031._003643.job.log.tgz.1 from /tmp/job_11082573/atlas/pilot/slots/0/PanDA_Pilot-7000833974/log.48442031._003643.job.log.tgz.1 to /tmp/j
[2026-02-08 03:38:49] 2026-02-08 02:38:15,834 | INFO     | executing command: /usr/bin/env mv /tmp/job_11082573/atlas/pilot/slots/0/PanDA_Pilot-7000833974/log.48442031._003643.job.log.tgz.1 /tmp/job_11082573/atlas/pilot/sl
[2026-02-08 03:38:49] 2026-02-08 02:38:15,842 | INFO     | adding to output.list: log.48442031._003643.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/9f/log.48442031._003643.job.log.tg
[2026-02-08 03:38:49] 2026-02-08 02:38:15,843 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 03:38:49] 2026-02-08 02:38:15,843 | INFO     | summary of transferred files:
[2026-02-08 03:38:49] 2026-02-08 02:38:15,843 | INFO     |  -- lfn=log.48442031._003643.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 03:38:49] 2026-02-08 02:38:15,843 | INFO     | stage-out finished correctly
[2026-02-08 03:38:49] 2026-02-08 02:38:16,523 | INFO     | time since job start (3046s) is within the limit (349056.0s)
[2026-02-08 03:38:49] 2026-02-08 02:38:17,200 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 03:38:49] 2026-02-08 02:38:17,323 | INFO     | job 7000833974 has state=finished
[2026-02-08 03:38:49] 2026-02-08 02:38:17,323 | INFO     | preparing for final server update for job 7000833974 in state='finished'
[2026-02-08 03:38:49] 2026-02-08 02:38:17,323 | INFO     | reading metadata from: /tmp/job_11082573/atlas/pilot/slots/0/PanDA_Pilot-7000833974/jobReport.json
[2026-02-08 03:38:49] 2026-02-08 02:38:17,324 | INFO     | added worker_node to metadata from /tmp/job_11082573/atlas/pilot/slots/0/workernode_map.json
[2026-02-08 03:38:49] 2026-02-08 02:38:17,325 | INFO     | this job has now completed (state=finished)
[2026-02-08 03:38:49] 2026-02-08 02:38:17,325 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 03:38:49] 2026-02-08 02:38:17,325 | INFO     | log transfer has been attempted: DONE
[2026-02-08 03:38:49] 2026-02-08 02:38:17,325 | INFO     | job 7000833974 has finished - writing final server update
[2026-02-08 03:38:49] 2026-02-08 02:38:17,325 | INFO     | total number of processed events: 400 (read)
[2026-02-08 03:38:49] 2026-02-08 02:38:17,342 | INFO     | using path: /tmp/job_11082573/atlas/pilot/slots/0/PanDA_Pilot-7000833974/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 03:38:49] 2026-02-08 02:38:17,342 | INFO     | extracted standard info from prmon json
[2026-02-08 03:38:49] 2026-02-08 02:38:17,342 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 03:38:49] 2026-02-08 02:38:17,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 03:38:49] 2026-02-08 02:38:17,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 03:38:49] 2026-02-08 02:38:17,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 03:38:49] 2026-02-08 02:38:17,343 | INFO     | fitting pss+swap vs Time
[2026-02-08 03:38:49] 2026-02-08 02:38:17,343 | INFO     | sum of square deviations: 24640462.0
[2026-02-08 03:38:49] 2026-02-08 02:38:17,343 | INFO     | sum of deviations: -2127731240.0
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | mean x: 1770516852.0
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | mean y: 2658448.488372093
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | intersect: 152888753560.9443
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | chi2: 0.019783901489522564
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | current memory leak: -86.35 B/s (using 43 data points, chi2=0.02)
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | could have reported an average CPU frequency of 2595 MHz (5 samples)
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | ..............................
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | . Timing measurements:
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | . get job = 0 s
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | . initial setup = 2 s
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | . payload setup = 2 s
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | . stage-in = 0 s
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | . payload execution = 3027 s
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | . stage-out = 0 s
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | . log creation = 0 s
[2026-02-08 03:38:49] 2026-02-08 02:38:17,344 | INFO     | ..............................
[2026-02-08 03:38:49] 2026-02-08 02:38:17,391 | INFO     | 
[2026-02-08 03:38:49] 2026-02-08 02:38:17,391 | INFO     | job summary report
[2026-02-08 03:38:49] 2026-02-08 02:38:17,391 | INFO     | --------------------------------------------------
[2026-02-08 03:38:49] 2026-02-08 02:38:17,391 | INFO     | PanDA job id: 7000833974
[2026-02-08 03:38:49] 2026-02-08 02:38:17,391 | INFO     | task id: 48442031
[2026-02-08 03:38:49] 2026-02-08 02:38:17,391 | INFO     | errors: (none)
[2026-02-08 03:38:49] 2026-02-08 02:38:17,391 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 03:38:49] 2026-02-08 02:38:17,391 | INFO     | pilot state: finished 
[2026-02-08 03:38:49] 2026-02-08 02:38:17,391 | INFO     | transexitcode: 0
[2026-02-08 03:38:49] 2026-02-08 02:38:17,391 | INFO     | exeerrorcode: 0
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | exeerrordiag: 
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | exitcode: 0
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | exitmsg: OK
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | cpuconsumptiontime: 19820 s
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | nevents: 400
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | neventsw: 0
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | pid: 21300
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | pgrp: 21300
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | corecount: 8
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | event service: False
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | sizes: {0: 2282627, 1: 2283199, 11: 2283199, 3033: 2308778, 3034: 2308777, 3035: 2317861, 3036: 2318045, 3037: 2318271}
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | --------------------------------------------------
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | 
[2026-02-08 03:38:49] 2026-02-08 02:38:17,392 | INFO     | executing command: ls -lF /tmp/job_11082573/atlas/pilot/slots/0
[2026-02-08 03:38:49] 2026-02-08 02:38:17,401 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,401 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,401 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,401 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,401 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,401 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | job 7000833974 has completed (purged errors)
[2026-02-08 03:38:49] 2026-02-08 02:38:17,402 | INFO     | overall cleanup function is called
[2026-02-08 03:38:49] 2026-02-08 02:38:18,408 | INFO     | --- collectZombieJob: --- 10, [21300]
[2026-02-08 03:38:49] 2026-02-08 02:38:18,408 | INFO     | zombie collector waiting for pid 21300
[2026-02-08 03:38:49] 2026-02-08 02:38:18,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 03:38:49] 2026-02-08 02:38:18,409 | INFO     | collected zombie processes
[2026-02-08 03:38:49] 2026-02-08 02:38:18,409 | INFO     | will attempt to kill all subprocesses of pid=21300
[2026-02-08 03:38:49] 2026-02-08 02:38:18,499 | INFO     | process IDs to be killed: [21300] (in reverse order)
[2026-02-08 03:38:49] 2026-02-08 02:38:18,531 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 03:38:49] 2026-02-08 02:38:18,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 03:38:49] 2026-02-08 02:38:18,535 | INFO     | did not find any defunct processes belonging to 21300
[2026-02-08 03:38:49] 2026-02-08 02:38:18,538 | INFO     | did not find any defunct processes belonging to 21300
[2026-02-08 03:38:49] 2026-02-08 02:38:18,538 | INFO     | ready for new job
[2026-02-08 03:38:49] 2026-02-08 02:38:18,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 03:38:49] 2026-02-08 02:38:18,538 | INFO     | **************************************
[2026-02-08 03:38:49] 2026-02-08 02:38:18,538 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 03:38:49] 2026-02-08 02:38:18,538 | INFO     | **************************************
[2026-02-08 03:38:49] 2026-02-08 02:38:18,538 | INFO     | 
[2026-02-08 03:38:49] 2026-02-08 02:38:18,552 | INFO     | architecture information:
[2026-02-08 03:38:49] 2026-02-08 02:38:18,552 | INFO     | executing command: cat /etc/os-release
[2026-02-08 03:38:49] 2026-02-08 02:38:18,559 | INFO     | cat /etc/os-release:
[2026-02-08 03:38:49] NAME="CentOS Linux"
[2026-02-08 03:38:49] VERSION="7 (Core)"
[2026-02-08 03:38:49] ID="centos"
[2026-02-08 03:38:49] ID_LIKE="rhel fedora"
[2026-02-08 03:38:49] VERSION_ID="7"
[2026-02-08 03:38:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 03:38:49] ANSI_COLOR="0;31"
[2026-02-08 03:38:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 03:38:49] HOME_URL="https://www.centos.org/"
[2026-02-08 03:38:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 03:38:49] 
[2026-02-08 03:38:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 03:38:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 03:38:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 03:38:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 03:38:49] 
[2026-02-08 03:38:49] 2026-02-08 02:38:18,559 | INFO     | **************************************
[2026-02-08 03:38:49] 2026-02-08 02:38:19,062 | INFO     | executing command: df -mP /tmp/job_11082573/atlas/pilot/slots/0
[2026-02-08 03:38:49] 2026-02-08 02:38:19,069 | INFO     | sufficient remaining disk space (222983880704 B)
[2026-02-08 03:38:49] 2026-02-08 02:38:19,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 03:38:49] 2026-02-08 02:38:19,069 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 03:38:49] 2026-02-08 02:38:19,069 | INFO     | update_server=False
[2026-02-08 03:38:49] 2026-02-08 02:38:19,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 03:38:49] 2026-02-08 02:38:19,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 03:38:49] 2026-02-08 02:38:19,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 03:38:49] 2026-02-08 02:38:19,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 03:38:49] 2026-02-08 02:38:19,242 | INFO     | all data control threads have been joined
[2026-02-08 03:38:49] 2026-02-08 02:38:19,458 | WARNING  | process 21300 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 03:38:49] 2026-02-08 02:38:19,531 | INFO     | using path: /tmp/job_11082573/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 03:38:49] 2026-02-08 02:38:19,615 | INFO     | number of running child processes to parent process 21300: 1
[2026-02-08 03:38:49] 2026-02-08 02:38:19,615 | INFO     | maximum number of monitored processes: 6
[2026-02-08 03:38:49] 2026-02-08 02:38:19,615 | INFO     | aborting job monitoring since job object (job id=7000833974) has expired
[2026-02-08 03:38:49] 2026-02-08 02:38:19,616 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 03:38:49] 2026-02-08 02:38:19,616 | INFO     | will abort loop
[2026-02-08 03:38:49] 2026-02-08 02:38:20,074 | INFO     | all job control threads have been joined
[2026-02-08 03:38:49] 2026-02-08 02:38:20,075 | INFO     | [job] retrieve thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:20,075 | INFO     | [job] queue monitor thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:20,150 | INFO     | [payload] validate_post thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:20,169 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:20,248 | INFO     | [data] control thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:20,370 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:20,371 | INFO     | [data] copytool_in thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:20,380 | INFO     | [payload] failed_post thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:20,548 | INFO     | all payload control threads have been joined
[2026-02-08 03:38:49] 2026-02-08 02:38:20,621 | INFO     | [job] job monitor thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:21,075 | INFO     | [data] copytool_out thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:21,079 | INFO     | [job] control thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:21,311 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:21,380 | INFO     | [job] validate thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:21,553 | INFO     | [payload] control thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:23,075 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:29,483 | INFO     | job.realtimelogging is not enabled
[2026-02-08 03:38:49] 2026-02-08 02:38:30,489 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 03:38:49] 2026-02-08 02:38:34,461 | INFO     | [monitor] cgroup control has ended
[2026-02-08 03:38:49] 2026-02-08 02:38:35,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-02-08 03:38:49] 2026-02-08 02:38:40,538 | INFO     | all workflow threads have been joined
[2026-02-08 03:38:49] 2026-02-08 02:38:40,539 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 03:38:49] 2026-02-08 02:38:40,539 | INFO     | traces error code: 0
[2026-02-08 03:38:49] 2026-02-08 02:38:40,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 03:38:49] 2026-02-08 02:38:49,705 | INFO     | PID=15531 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-08 03:38:49] 2026-02-08 02:38:49,706 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 03:38:49] 2026-02-08 02:38:49,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 03:38:49] 2026-02-08 02:38:49,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 03:38:49] 2026-02-08 02:38:49,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 03:38:49] 2026-02-08 02:38:49,706 | CRITICAL | thread 'MainThread' is not alive
[2026-02-08 03:38:49] 2026-02-08 02:38:49,706 | INFO     | [monitor] control thread has ended
[2026-02-08 03:38:49] 2026-02-08 02:38:49,759 [wrapper] ==== pilot stdout END ====
[2026-02-08 03:38:49] 2026-02-08 02:38:49,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 03:38:49] 2026-02-08 02:38:49,761 [wrapper] pilotpid: 15531
[2026-02-08 03:38:49] 2026-02-08 02:38:49,762 [wrapper] Pilot exit status: 0
[2026-02-08 03:38:49] 2026-02-08 02:38:49,767 [wrapper] pandaids: 7000833974
[2026-02-08 03:38:49] 2026-02-08 02:38:49,787 [wrapper] cleanup supervisor_pilot  6269 15532
[2026-02-08 03:38:49] 2026-02-08 02:38:49,788 [wrapper] Test setup, not cleaning
[2026-02-08 03:38:49] 2026-02-08 02:38:49,789 [wrapper] apfmon messages muted
[2026-02-08 03:38:49] 2026-02-08 02:38:49,791 [wrapper] ==== wrapper stdout END ====
[2026-02-08 03:38:49] 2026-02-08 02:38:49,792 [wrapper] ==== wrapper stderr END ====
[2026-02-08 03:38:49]  *** Error codes and diagnostics ***
[2026-02-08 03:38:49]     "exeErrorCode": 0,
[2026-02-08 03:38:49]     "exeErrorDiag": "",
[2026-02-08 03:38:49]     "pilotErrorCode": 0,
[2026-02-08 03:38:49]     "pilotErrorDiag": "",
[2026-02-08 03:38:49]  *** Listing of results directory ***
[2026-02-08 03:38:49] total 672300
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user    584627 Feb  7 16:47 pilot3.tar.gz
[2026-02-08 03:38:49] -rwx------ 1 mf493845 unix-user     36322 Feb  7 16:49 runpilot2-wrapper.sh
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user      5111 Feb  7 16:50 queuedata.json
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user       100 Feb  8 00:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 03:38:49] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb  8 00:40 run_atlas
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user       105 Feb  8 00:40 job.xml
[2026-02-08 03:38:49] -rw-r--r-- 2 mf493845 unix-user 497428838 Feb  8 02:47 EVNT.48442027._000072.pool.root.1
[2026-02-08 03:38:49] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  8 02:47 start_atlas.sh
[2026-02-08 03:38:49] drwxrwx--x 2 mf493845 unix-user       100 Feb  8 02:47 shared
[2026-02-08 03:38:49] -rw-r--r-- 2 mf493845 unix-user    597958 Feb  8 02:47 input.tar.gz
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user      6390 Feb  8 02:47 init_data.xml
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user         0 Feb  8 02:47 boinc_setup_complete
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user      8192 Feb  8 02:47 boinc_mmap_file
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user         0 Feb  8 02:47 boinc_lockfile
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user      2529 Feb  8 02:47 pandaJob.out
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user   1009510 Feb  8 02:47 agis_schedconf.cvmfs.json
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user   1513088 Feb  8 02:47 agis_ddmendpoints.agis.ALL.json
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user       414 Feb  8 02:47 workernode_map.json
[2026-02-08 03:38:49] drwx------ 5 mf493845 unix-user       440 Feb  8 02:47 pilot3
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user 185458269 Feb  8 03:37 HITS.48442031._003643.pool.root.1
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user        95 Feb  8 03:37 pilot_heartbeat.json
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user      1017 Feb  8 03:38 memory_monitor_summary.json
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user    336868 Feb  8 03:38 log.48442031._003643.job.log.tgz.1
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user      6315 Feb  8 03:38 heartbeat.json
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user       815 Feb  8 03:38 pilotlog.txt
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user    482400 Feb  8 03:38 log.48442031._003643.job.log.1
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user       357 Feb  8 03:38 output.list
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user       620 Feb  8 03:38 runtime_log
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user    839680 Feb  8 03:38 result.tar.gz
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user       642 Feb  8 03:38 SGkNDmtjz88n9Rq4apOajLDm4fhM0noT9bVooX4SDmoDbKDmvpbtAo.diag
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user      9219 Feb  8 03:38 runtime_log.err
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user     21958 Feb  8 03:38 stderr.txt
[2026-02-08 03:38:49] HITS file was successfully produced:
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user 185458269 Feb  8 03:37 shared/HITS.pool.root.1
[2026-02-08 03:38:49]  *** Contents of shared directory: ***
[2026-02-08 03:38:49] total 668304
[2026-02-08 03:38:49] -rw-r--r-- 2 mf493845 unix-user 497428838 Feb  8 02:47 ATLAS.root_0
[2026-02-08 03:38:49] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  8 02:47 start_atlas.sh
[2026-02-08 03:38:49] -rw-r--r-- 2 mf493845 unix-user    597958 Feb  8 02:47 input.tar.gz
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user 185458269 Feb  8 03:37 HITS.pool.root.1
[2026-02-08 03:38:49] -rw------- 1 mf493845 unix-user    839680 Feb  8 03:38 result.tar.gz
03:38:50 (10801): run_atlas exited; CPU time 19856.558852
03:38:50 (10801): called boinc_finish(0)

</stderr_txt>
]]>

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