Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:39:26 (4850): wrapper (7.7.26015): starting
16:39:26 (4850): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 16:39:26] Arguments: --nthreads 12
[2026-02-07 16:39:26] Threads: 12
[2026-02-07 16:39:26] Checking for CVMFS
[2026-02-07 16:39:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 16:39:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 16:39:26] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 16:39:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 16:39:26] 2.11.2.0 30551 223294 96628 155996 1 52 18868533 20275201 1 130560 0 91818734 99.908 13230193 29444 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 16:39:26] CVMFS is ok
[2026-02-07 16:39:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 16:39:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 16:39:26] Further information can be found at the LHC@home message board.
[2026-02-07 16:39:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 16:39:26] Checking for apptainer binary...
[2026-02-07 16:39:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 16:39:26] Running /usr/bin/apptainer --version
[2026-02-07 16:39:26] apptainer version 1.3.2-1.el7
[2026-02-07 16:39:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 16:39:28] c-205-16.aglt2.org
[2026-02-07 16:39:28] apptainer works
[2026-02-07 16:39:28] Set ATHENA_PROC_NUMBER=12
[2026-02-07 16:39:28] Set ATHENA_CORE_NUMBER=12
[2026-02-07 16:39:28] Starting ATLAS job with PandaID=7000834597
[2026-02-07 16:39:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 18:15:03]  *** The last 200 lines of the pilot log: ***
[2026-02-07 18:15:03]  direct_access_lan=False
[2026-02-07 18:15:03]  direct_access_wan=False
[2026-02-07 18:15:03]  domain=
[2026-02-07 18:15:03]  filesize=394179
[2026-02-07 18:15:03]  filetype=log
[2026-02-07 18:15:03]  guid=37b286a4-ee28-40f1-aa64-2fef429d6db1
[2026-02-07 18:15:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 18:15:03]  is_altstaged=None
[2026-02-07 18:15:03]  is_tar=False
[2026-02-07 18:15:03]  lfn=log.48431113._005637.job.log.tgz.1
[2026-02-07 18:15:03]  mtime=0
[2026-02-07 18:15:03]  protocol_id=None
[2026-02-07 18:15:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 18:15:03]  replicas=None
[2026-02-07 18:15:03]  scope=mc23_13p6TeV
[2026-02-07 18:15:03]  status=None
[2026-02-07 18:15:03]  status_code=0
[2026-02-07 18:15:03]  storage_token=
[2026-02-07 18:15:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7000834597/log.48431113._005637.job.log.tgz.1
[2026-02-07 18:15:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/0b/log.48431113._005637.job.log.tgz.1
[2026-02-07 18:15:03]  workdir=None
[2026-02-07 18:15:03] ]
[2026-02-07 18:15:03] 2026-02-07 23:14:00,933 | INFO     | transferring file log.48431113._005637.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7000834597/log.48431113._005637.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 18:15:03] 2026-02-07 23:14:00,934 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7000834597/log.48431113._005637.job.log.tgz.1 /tmp/boinchome/slots/0/log.48431113._005637.job
[2026-02-07 18:15:03] 2026-02-07 23:14:00,957 | INFO     | adding to output.list: log.48431113._005637.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/0b/log.48431113._005637.job.log.tg
[2026-02-07 18:15:03] 2026-02-07 23:14:00,958 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 18:15:03] 2026-02-07 23:14:00,958 | INFO     | summary of transferred files:
[2026-02-07 18:15:03] 2026-02-07 23:14:00,958 | INFO     |  -- lfn=log.48431113._005637.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 18:15:03] 2026-02-07 23:14:00,959 | INFO     | stage-out finished correctly
[2026-02-07 18:15:03] 2026-02-07 23:14:01,313 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 18:15:03] 2026-02-07 23:14:01,399 | INFO     | time since job start (5653s) is within the limit (349056.0s)
[2026-02-07 18:15:03] 2026-02-07 23:14:02,358 | INFO     | job 7000834597 has state=finished
[2026-02-07 18:15:03] 2026-02-07 23:14:02,358 | INFO     | preparing for final server update for job 7000834597 in state='finished'
[2026-02-07 18:15:03] 2026-02-07 23:14:02,358 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7000834597/jobReport.json
[2026-02-07 18:15:03] 2026-02-07 23:14:02,361 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-07 18:15:03] 2026-02-07 23:14:02,361 | INFO     | this job has now completed (state=finished)
[2026-02-07 18:15:03] 2026-02-07 23:14:02,361 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 18:15:03] 2026-02-07 23:14:02,361 | INFO     | log transfer has been attempted: DONE
[2026-02-07 18:15:03] 2026-02-07 23:14:02,361 | INFO     | job 7000834597 has finished - writing final server update
[2026-02-07 18:15:03] 2026-02-07 23:14:02,362 | INFO     | total number of processed events: 400 (read)
[2026-02-07 18:15:03] 2026-02-07 23:14:02,363 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7000834597/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 18:15:03] 2026-02-07 23:14:02,364 | INFO     | extracted standard info from prmon json
[2026-02-07 18:15:03] 2026-02-07 23:14:02,364 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 18:15:03] 2026-02-07 23:14:02,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 18:15:03] 2026-02-07 23:14:02,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 18:15:03] 2026-02-07 23:14:02,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 18:15:03] 2026-02-07 23:14:02,366 | INFO     | fitting pss+swap vs Time
[2026-02-07 18:15:03] 2026-02-07 23:14:02,367 | INFO     | sum of square deviations: 197203697.5
[2026-02-07 18:15:03] 2026-02-07 23:14:02,367 | INFO     | sum of deviations: -11022242012.0
[2026-02-07 18:15:03] 2026-02-07 23:14:02,367 | INFO     | mean x: 1770503309.5
[2026-02-07 18:15:03] 2026-02-07 23:14:02,367 | INFO     | mean y: 2838819.3255813955
[2026-02-07 18:15:03] 2026-02-07 23:14:02,367 | INFO     | intersect: 98961003436.67987
[2026-02-07 18:15:03] 2026-02-07 23:14:02,368 | INFO     | chi2: 0.10135290053412907
[2026-02-07 18:15:03] 2026-02-07 23:14:02,368 | INFO     | current memory leak: -55.89 B/s (using 86 data points, chi2=0.10)
[2026-02-07 18:15:03] 2026-02-07 23:14:02,368 | INFO     | could have reported an average CPU frequency of 1651 MHz (7 samples)
[2026-02-07 18:15:03] 2026-02-07 23:14:02,368 | INFO     | ..............................
[2026-02-07 18:15:03] 2026-02-07 23:14:02,368 | INFO     | . Timing measurements:
[2026-02-07 18:15:03] 2026-02-07 23:14:02,368 | INFO     | . get job = 0 s
[2026-02-07 18:15:03] 2026-02-07 23:14:02,368 | INFO     | . initial setup = 7 s
[2026-02-07 18:15:03] 2026-02-07 23:14:02,369 | INFO     | . payload setup = 7 s
[2026-02-07 18:15:03] 2026-02-07 23:14:02,369 | INFO     | . stage-in = 0 s
[2026-02-07 18:15:03] 2026-02-07 23:14:02,369 | INFO     | . payload execution = 5630 s
[2026-02-07 18:15:03] 2026-02-07 23:14:02,369 | INFO     | . stage-out = 0 s
[2026-02-07 18:15:03] 2026-02-07 23:14:02,369 | INFO     | . log creation = 0 s
[2026-02-07 18:15:03] 2026-02-07 23:14:02,369 | INFO     | ..............................
[2026-02-07 18:15:03] 2026-02-07 23:14:02,448 | INFO     | 
[2026-02-07 18:15:03] 2026-02-07 23:14:02,448 | INFO     | job summary report
[2026-02-07 18:15:03] 2026-02-07 23:14:02,448 | INFO     | --------------------------------------------------
[2026-02-07 18:15:03] 2026-02-07 23:14:02,448 | INFO     | PanDA job id: 7000834597
[2026-02-07 18:15:03] 2026-02-07 23:14:02,448 | INFO     | task id: 48431113
[2026-02-07 18:15:03] 2026-02-07 23:14:02,449 | INFO     | errors: (none)
[2026-02-07 18:15:03] 2026-02-07 23:14:02,449 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 18:15:03] 2026-02-07 23:14:02,449 | INFO     | pilot state: finished 
[2026-02-07 18:15:03] 2026-02-07 23:14:02,449 | INFO     | transexitcode: 0
[2026-02-07 18:15:03] 2026-02-07 23:14:02,449 | INFO     | exeerrorcode: 0
[2026-02-07 18:15:03] 2026-02-07 23:14:02,450 | INFO     | exeerrordiag: 
[2026-02-07 18:15:03] 2026-02-07 23:14:02,450 | INFO     | exitcode: 0
[2026-02-07 18:15:03] 2026-02-07 23:14:02,450 | INFO     | exitmsg: OK
[2026-02-07 18:15:03] 2026-02-07 23:14:02,450 | INFO     | cpuconsumptiontime: 62295 s
[2026-02-07 18:15:03] 2026-02-07 23:14:02,450 | INFO     | nevents: 400
[2026-02-07 18:15:03] 2026-02-07 23:14:02,450 | INFO     | neventsw: 0
[2026-02-07 18:15:03] 2026-02-07 23:14:02,451 | INFO     | pid: 13109
[2026-02-07 18:15:03] 2026-02-07 23:14:02,451 | INFO     | pgrp: 13109
[2026-02-07 18:15:03] 2026-02-07 23:14:02,451 | INFO     | corecount: 12
[2026-02-07 18:15:03] 2026-02-07 23:14:02,451 | INFO     | event service: False
[2026-02-07 18:15:03] 2026-02-07 23:14:02,451 | INFO     | sizes: {0: 2282628, 1: 2283145, 12: 2283145, 5640: 2309758, 5641: 2318756, 5642: 2318812, 5643: 2319134}
[2026-02-07 18:15:03] 2026-02-07 23:14:02,451 | INFO     | --------------------------------------------------
[2026-02-07 18:15:03] 2026-02-07 23:14:02,451 | INFO     | 
[2026-02-07 18:15:03] 2026-02-07 23:14:02,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 18:15:03] 2026-02-07 23:14:02,475 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,480 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,480 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,480 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,480 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,480 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,480 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,480 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,482 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 18:15:03] 2026-02-07 23:14:02,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,482 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 18:15:03] 2026-02-07 23:14:02,482 | INFO     | job 7000834597 has completed (purged errors)
[2026-02-07 18:15:03] 2026-02-07 23:14:02,483 | INFO     | overall cleanup function is called
[2026-02-07 18:15:03] 2026-02-07 23:14:03,490 | INFO     | --- collectZombieJob: --- 10, [13109]
[2026-02-07 18:15:03] 2026-02-07 23:14:03,490 | INFO     | zombie collector waiting for pid 13109
[2026-02-07 18:15:03] 2026-02-07 23:14:03,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 18:15:03] 2026-02-07 23:14:03,491 | INFO     | collected zombie processes
[2026-02-07 18:15:03] 2026-02-07 23:14:03,491 | INFO     | will attempt to kill all subprocesses of pid=13109
[2026-02-07 18:15:03] 2026-02-07 23:14:03,578 | INFO     | process IDs to be killed: [13109] (in reverse order)
[2026-02-07 18:15:03] 2026-02-07 23:14:03,633 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 18:15:03] 2026-02-07 23:14:03,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 18:15:03] 2026-02-07 23:14:03,637 | INFO     | did not find any defunct processes belonging to 13109
[2026-02-07 18:15:03] 2026-02-07 23:14:03,640 | INFO     | did not find any defunct processes belonging to 13109
[2026-02-07 18:15:03] 2026-02-07 23:14:03,640 | INFO     | ready for new job
[2026-02-07 18:15:03] 2026-02-07 23:14:03,641 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 18:15:03] 2026-02-07 23:14:03,642 | INFO     | **************************************
[2026-02-07 18:15:03] 2026-02-07 23:14:03,643 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 18:15:03] 2026-02-07 23:14:03,643 | INFO     | **************************************
[2026-02-07 18:15:03] 2026-02-07 23:14:03,643 | INFO     | 
[2026-02-07 18:15:03] 2026-02-07 23:14:03,643 | INFO     | architecture information:
[2026-02-07 18:15:03] 2026-02-07 23:14:03,644 | INFO     | executing command: cat /etc/os-release
[2026-02-07 18:15:03] 2026-02-07 23:14:03,659 | INFO     | cat /etc/os-release:
[2026-02-07 18:15:03] NAME="CentOS Linux"
[2026-02-07 18:15:03] VERSION="7 (Core)"
[2026-02-07 18:15:03] ID="centos"
[2026-02-07 18:15:03] ID_LIKE="rhel fedora"
[2026-02-07 18:15:03] VERSION_ID="7"
[2026-02-07 18:15:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 18:15:03] ANSI_COLOR="0;31"
[2026-02-07 18:15:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 18:15:03] HOME_URL="https://www.centos.org/"
[2026-02-07 18:15:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 18:15:03] 
[2026-02-07 18:15:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 18:15:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 18:15:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 18:15:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 18:15:03] 
[2026-02-07 18:15:03] 2026-02-07 23:14:03,659 | INFO     | **************************************
[2026-02-07 18:15:03] 2026-02-07 23:14:04,162 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 18:15:03] 2026-02-07 23:14:04,179 | INFO     | sufficient remaining disk space (28542238720 B)
[2026-02-07 18:15:03] 2026-02-07 23:14:04,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 18:15:03] 2026-02-07 23:14:04,180 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 18:15:03] 2026-02-07 23:14:04,180 | INFO     | update_server=False
[2026-02-07 18:15:03] 2026-02-07 23:14:04,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 18:15:03] 2026-02-07 23:14:04,180 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 18:15:03] 2026-02-07 23:14:04,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 18:15:03] 2026-02-07 23:14:04,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 18:15:03] 2026-02-07 23:14:04,181 | INFO     | aborting loop
[2026-02-07 18:15:03] 2026-02-07 23:14:05,052 | INFO     | all data control threads have been joined
[2026-02-07 18:15:03] 2026-02-07 23:14:05,185 | INFO     | [job] retrieve thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:05,186 | INFO     | [job] queue monitor thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:05,187 | INFO     | [job] job monitor thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:05,260 | INFO     | all job control threads have been joined
[2026-02-07 18:15:03] 2026-02-07 23:14:05,296 | INFO     | all payload control threads have been joined
[2026-02-07 18:15:03] 2026-02-07 23:14:05,592 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:05,892 | INFO     | [job] validate thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:05,942 | INFO     | [payload] validate_post thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:06,057 | INFO     | [data] control thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:06,115 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:06,187 | INFO     | [data] copytool_out thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:06,265 | INFO     | [job] control thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:06,302 | INFO     | [payload] control thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:06,455 | INFO     | [data] copytool_in thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:06,459 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:06,495 | INFO     | [payload] failed_post thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:07,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 18:15:03] 2026-02-07 23:14:11,408 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:15,125 | INFO     | job.realtimelogging is not enabled
[2026-02-07 18:15:03] 2026-02-07 23:14:16,128 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 18:15:03] 2026-02-07 23:14:34,604 | INFO     | PID=8609 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-07 18:15:03] 2026-02-07 23:14:34,604 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 18:15:03] 2026-02-07 23:14:34,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 18:15:03] 2026-02-07 23:14:34,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 18:15:03] 2026-02-07 23:14:56,621 | INFO     | [monitor] cgroup control has ended
[2026-02-07 18:15:03] 2026-02-07 23:14:57,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940665222976)>', '<ExcThread(monitor, started 139939412956928)>']
[2026-02-07 18:15:03] 2026-02-07 23:14:58,711 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 18:15:03] 2026-02-07 23:14:58,711 | INFO     | [monitor] control thread has ended
[2026-02-07 18:15:03] 2026-02-07 23:15:02,773 | INFO     | all workflow threads have been joined
[2026-02-07 18:15:03] 2026-02-07 23:15:02,773 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 18:15:03] 2026-02-07 23:15:02,773 | INFO     | traces error code: 0
[2026-02-07 18:15:03] 2026-02-07 23:15:02,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 18:15:03] 2026-02-07 23:15:02,887 [wrapper] ==== pilot stdout END ====
[2026-02-07 18:15:03] 2026-02-07 23:15:02,891 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 18:15:03] 2026-02-07 23:15:02,895 [wrapper] pilotpid: 8609
[2026-02-07 18:15:03] 2026-02-07 23:15:02,899 [wrapper] Pilot exit status: 0
[2026-02-07 18:15:03] 2026-02-07 23:15:02,916 [wrapper] pandaids: 7000834597
[2026-02-07 18:15:03] 2026-02-07 23:15:02,959 [wrapper] cleanup supervisor_pilot 14699 8610
[2026-02-07 18:15:03] 2026-02-07 23:15:02,963 [wrapper] Test setup, not cleaning
[2026-02-07 18:15:03] 2026-02-07 23:15:02,967 [wrapper] apfmon messages muted
[2026-02-07 18:15:03] 2026-02-07 23:15:02,971 [wrapper] ==== wrapper stdout END ====
[2026-02-07 18:15:03] 2026-02-07 23:15:02,975 [wrapper] ==== wrapper stderr END ====
[2026-02-07 18:15:03]  *** Error codes and diagnostics ***
[2026-02-07 18:15:03]     "exeErrorCode": 0,
[2026-02-07 18:15:03]     "exeErrorDiag": "",
[2026-02-07 18:15:03]     "pilotErrorCode": 0,
[2026-02-07 18:15:03]     "pilotErrorDiag": "",
[2026-02-07 18:15:03]  *** Listing of results directory ***
[2026-02-07 18:15:03] total 898632
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas    584627 Feb  7 10:47 pilot3.tar.gz
[2026-02-07 18:15:03] -rwx------ 1 boincer umatlas     36322 Feb  7 10:49 runpilot2-wrapper.sh
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas      5111 Feb  7 10:50 queuedata.json
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas       100 Feb  7 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 18:15:03] -rwxr-xr-x 1 boincer umatlas      7986 Feb  7 16:39 run_atlas
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas       105 Feb  7 16:39 job.xml
[2026-02-07 18:15:03] -rw-r--r-- 2 boincer umatlas 657859860 Feb  7 16:39 EVNT.48431111._000112.pool.root.1
[2026-02-07 18:15:03] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 16:39 start_atlas.sh
[2026-02-07 18:15:03] drwxrwx--x 2 boincer umatlas      4096 Feb  7 16:39 shared
[2026-02-07 18:15:03] -rw-r--r-- 2 boincer umatlas    597949 Feb  7 16:39 input.tar.gz
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas         0 Feb  7 16:39 boinc_lockfile
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas      2544 Feb  7 16:39 pandaJob.out
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas        57 Feb  7 16:39 setup.sh.local
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas   1009510 Feb  7 16:39 agis_schedconf.cvmfs.json
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas   1513088 Feb  7 16:39 agis_ddmendpoints.agis.ALL.json
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas       445 Feb  7 16:39 workernode_map.json
[2026-02-07 18:15:03] drwx------ 5 boincer umatlas      4096 Feb  7 16:39 pilot3
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas      5953 Feb  7 18:10 init_data.xml
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas 255985105 Feb  7 18:13 HITS.48431113._005637.pool.root.1
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas       530 Feb  7 18:13 boinc_task_state.xml
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas      1060 Feb  7 18:13 memory_monitor_summary.json
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas        95 Feb  7 18:13 pilot_heartbeat.json
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas    394179 Feb  7 18:14 log.48431113._005637.job.log.tgz.1
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas      6434 Feb  7 18:14 heartbeat.json
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas      8192 Feb  7 18:14 boinc_mmap_file
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas        27 Feb  7 18:14 wrapper_checkpoint.txt
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas      4813 Feb  7 18:15 pilotlog.txt
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas    811193 Feb  7 18:15 log.48431113._005637.job.log.1
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas       357 Feb  7 18:15 output.list
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas       620 Feb  7 18:15 runtime_log
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas   1218560 Feb  7 18:15 result.tar.gz
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas       659 Feb  7 18:15 Y4QLDmtjz88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmybbKDmfGB2jn.diag
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas      9343 Feb  7 18:15 runtime_log.err
[2026-02-07 18:15:03] -rw-r--r-- 1 boincer umatlas     20939 Feb  7 18:15 stderr.txt
[2026-02-07 18:15:03] HITS file was successfully produced:
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas 255985105 Feb  7 18:13 shared/HITS.pool.root.1
[2026-02-07 18:15:03]  *** Contents of shared directory: ***
[2026-02-07 18:15:03] total 894228
[2026-02-07 18:15:03] -rw-r--r-- 2 boincer umatlas 657859860 Feb  7 16:39 ATLAS.root_0
[2026-02-07 18:15:03] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 16:39 start_atlas.sh
[2026-02-07 18:15:03] -rw-r--r-- 2 boincer umatlas    597949 Feb  7 16:39 input.tar.gz
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas 255985105 Feb  7 18:13 HITS.pool.root.1
[2026-02-07 18:15:03] -rw------- 1 boincer umatlas   1218560 Feb  7 18:15 result.tar.gz
18:15:04 (4850): run_atlas exited; CPU time 62271.939585
18:15:04 (4850): called boinc_finish(0)

</stderr_txt>
]]>

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