Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:57:41 (2787): wrapper (7.7.26015): starting
10:57:41 (2787): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 10:57:41] Arguments: --nthreads 8
[2026-02-08 10:57:41] Threads: 8
[2026-02-08 10:57:41] Checking for CVMFS
[2026-02-08 10:57:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 10:57:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 10:57:44] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 10:57:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 10:57:44] 2.11.2.0 32469 78464 109024 156014 3 53 16835149 25165825 4784 130560 0 28861799 99.706 31941856 2650 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-08 10:57:44] CVMFS is ok
[2026-02-08 10:57:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 10:57:44] Checking for apptainer binary...
[2026-02-08 10:57:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 10:57:44] Running /usr/bin/apptainer --version
[2026-02-08 10:57:45] apptainer version 1.3.2-1.el7
[2026-02-08 10:57:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 10:57:53] cg-vwn363.simple-grid.lan
[2026-02-08 10:57:53] apptainer works
[2026-02-08 10:57:53] Set ATHENA_PROC_NUMBER=8
[2026-02-08 10:57:53] Set ATHENA_CORE_NUMBER=8
[2026-02-08 10:57:53] Starting ATLAS job with PandaID=7000834398
[2026-02-08 10:57:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 14:58:30]  *** The last 200 lines of the pilot log: ***
[2026-02-08 14:58:30] 2026-02-08 13:57:48,516 | INFO     | log transfer has been attempted: DONE
[2026-02-08 14:58:30] 2026-02-08 13:57:48,516 | INFO     | job 7000834398 has finished - writing final server update
[2026-02-08 14:58:30] 2026-02-08 13:57:48,516 | INFO     | total number of processed events: 400 (read)
[2026-02-08 14:58:30] 2026-02-08 13:57:48,518 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7000834398/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 14:58:30] 2026-02-08 13:57:48,519 | INFO     | extracted standard info from prmon json
[2026-02-08 14:58:30] 2026-02-08 13:57:48,519 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 14:58:30] 2026-02-08 13:57:48,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 14:58:30] 2026-02-08 13:57:48,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 14:58:30] 2026-02-08 13:57:48,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 14:58:30] 2026-02-08 13:57:48,524 | INFO     | fitting pss+swap vs Time
[2026-02-08 14:58:30] 2026-02-08 13:57:48,525 | INFO     | sum of square deviations: 3627000098.0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,527 | INFO     | sum of deviations: 89989102285.0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,527 | INFO     | mean x: 1770552133.0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,527 | INFO     | mean y: 2426742.700440529
[2026-02-08 14:58:30] 2026-02-08 13:57:48,527 | INFO     | intersect: -43926548358.60156
[2026-02-08 14:58:30] 2026-02-08 13:57:48,528 | INFO     | chi2: 5.045982340611187
[2026-02-08 14:58:30] 2026-02-08 13:57:48,528 | INFO     | sum of square deviations: 3392567795.5
[2026-02-08 14:58:30] 2026-02-08 13:57:48,530 | INFO     | sum of deviations: 102634000813.5
[2026-02-08 14:58:30] 2026-02-08 13:57:48,530 | INFO     | mean x: 1770551980.5
[2026-02-08 14:58:30] 2026-02-08 13:57:48,530 | INFO     | mean y: 2434792.896396396
[2026-02-08 14:58:30] 2026-02-08 13:57:48,530 | INFO     | intersect: -53561368308.700615
[2026-02-08 14:58:30] 2026-02-08 13:57:48,531 | INFO     | chi2: 4.298774357733532
[2026-02-08 14:58:30] 2026-02-08 13:57:48,531 | INFO     | current chi2=4.298774357733532 (change=14.807978554818938 %)
[2026-02-08 14:58:30] 2026-02-08 13:57:48,531 | INFO     | right removable region: 221
[2026-02-08 14:58:30] 2026-02-08 13:57:48,531 | INFO     | sum of square deviations: 3392567795.5
[2026-02-08 14:58:30] 2026-02-08 13:57:48,537 | INFO     | sum of deviations: 19143408844.5
[2026-02-08 14:58:30] 2026-02-08 13:57:48,537 | INFO     | mean x: 1770552285.5
[2026-02-08 14:58:30] 2026-02-08 13:57:48,537 | INFO     | mean y: 2472740.581081081
[2026-02-08 14:58:30] 2026-02-08 13:57:48,538 | INFO     | intersect: -9988309559.141539
[2026-02-08 14:58:30] 2026-02-08 13:57:48,538 | INFO     | chi2: 1.1960771701942643
[2026-02-08 14:58:30] 2026-02-08 13:57:48,538 | INFO     | current chi2=1.1960771701942643 (change=76.29644557873361 %)
[2026-02-08 14:58:30] 2026-02-08 13:57:48,539 | INFO     | sum of square deviations: 3168461268.0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,540 | INFO     | sum of deviations: -2475427336.0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,540 | INFO     | mean x: 1770552438.0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,540 | INFO     | mean y: 2487362.824884793
[2026-02-08 14:58:30] 2026-02-08 13:57:48,541 | INFO     | intersect: 1385768878.4020684
[2026-02-08 14:58:30] 2026-02-08 13:57:48,541 | INFO     | chi2: 0.7992986180486173
[2026-02-08 14:58:30] 2026-02-08 13:57:48,541 | INFO     | current chi2=0.7992986180486173 (change=33.173323764820545 %)
[2026-02-08 14:58:30] 2026-02-08 13:57:48,542 | INFO     | sum of square deviations: 2954447953.0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,543 | INFO     | sum of deviations: -4652536398.5
[2026-02-08 14:58:30] 2026-02-08 13:57:48,543 | INFO     | mean x: 1770552590.5
[2026-02-08 14:58:30] 2026-02-08 13:57:48,543 | INFO     | mean y: 2488908.1745283017
[2026-02-08 14:58:30] 2026-02-08 13:57:48,544 | INFO     | intersect: 2790678276.8161883
[2026-02-08 14:58:30] 2026-02-08 13:57:48,544 | INFO     | chi2: 0.7966836736847722
[2026-02-08 14:58:30] 2026-02-08 13:57:48,544 | INFO     | current chi2=0.7966836736847722 (change=0.3271548711330406 %)
[2026-02-08 14:58:30] 2026-02-08 13:57:48,544 | INFO     | left removable region: 30
[2026-02-08 14:58:30] 2026-02-08 13:57:48,545 | INFO     | sum of square deviations: 2160561440.0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,546 | INFO     | sum of deviations: 5953789466.0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,546 | INFO     | mean x: 1770552865.0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,546 | INFO     | mean y: 2501560.0209424086
[2026-02-08 14:58:30] 2026-02-08 13:57:48,546 | INFO     | intersect: -4876553856.534636
[2026-02-08 14:58:30] 2026-02-08 13:57:48,547 | INFO     | chi2: 0.00021943080524095392
[2026-02-08 14:58:30] 2026-02-08 13:57:48,547 | INFO     | current memory leak: 2.76 B/s (using 191 data points, chi2=0.00)
[2026-02-08 14:58:30] 2026-02-08 13:57:48,547 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-02-08 14:58:30] 2026-02-08 13:57:48,548 | INFO     | ..............................
[2026-02-08 14:58:30] 2026-02-08 13:57:48,548 | INFO     | . Timing measurements:
[2026-02-08 14:58:30] 2026-02-08 13:57:48,553 | INFO     | . get job = 0 s
[2026-02-08 14:58:30] 2026-02-08 13:57:48,553 | INFO     | . initial setup = 103 s
[2026-02-08 14:58:30] 2026-02-08 13:57:48,553 | INFO     | . payload setup = 126 s
[2026-02-08 14:58:30] 2026-02-08 13:57:48,553 | INFO     | . stage-in = 0 s
[2026-02-08 14:58:30] 2026-02-08 13:57:48,553 | INFO     | . payload execution = 13940 s
[2026-02-08 14:58:30] 2026-02-08 13:57:48,553 | INFO     | . stage-out = 3 s
[2026-02-08 14:58:30] 2026-02-08 13:57:48,554 | INFO     | . log creation = 1 s
[2026-02-08 14:58:30] 2026-02-08 13:57:48,554 | INFO     | ..............................
[2026-02-08 14:58:30] 2026-02-08 13:57:48,671 | INFO     | 
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | job summary report
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | --------------------------------------------------
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | PanDA job id: 7000834398
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | task id: 48442098
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | errors: (none)
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | pilot state: finished 
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | transexitcode: 0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | exeerrorcode: 0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | exeerrordiag: 
[2026-02-08 14:58:30] 2026-02-08 13:57:48,672 | INFO     | exitcode: 0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | exitmsg: OK
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | cpuconsumptiontime: 54032 s
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | nevents: 400
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | neventsw: 0
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | pid: 11410
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | pgrp: 11410
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | corecount: 8
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | event service: False
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | sizes: {0: 2282005, 1: 2282690, 2: 2283151, 13: 2283151, 14071: 2313476, 14075: 2322474, 14078: 2322658, 14079: 2322852}
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | --------------------------------------------------
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | 
[2026-02-08 14:58:30] 2026-02-08 13:57:48,673 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-02-08 14:58:30] 2026-02-08 13:57:49,241 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,242 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,242 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,242 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,244 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 14:58:30] 2026-02-08 13:57:49,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,244 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 14:58:30] 2026-02-08 13:57:49,244 | INFO     | job 7000834398 has completed (purged errors)
[2026-02-08 14:58:30] 2026-02-08 13:57:49,244 | INFO     | overall cleanup function is called
[2026-02-08 14:58:30] 2026-02-08 13:57:50,253 | INFO     | --- collectZombieJob: --- 10, [11410]
[2026-02-08 14:58:30] 2026-02-08 13:57:50,253 | INFO     | zombie collector waiting for pid 11410
[2026-02-08 14:58:30] 2026-02-08 13:57:50,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 14:58:30] 2026-02-08 13:57:50,253 | INFO     | collected zombie processes
[2026-02-08 14:58:30] 2026-02-08 13:57:50,254 | INFO     | will attempt to kill all subprocesses of pid=11410
[2026-02-08 14:58:30] 2026-02-08 13:57:50,349 | INFO     | process IDs to be killed: [11410] (in reverse order)
[2026-02-08 14:58:30] 2026-02-08 13:57:50,981 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 14:58:30] 2026-02-08 13:57:50,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 14:58:30] 2026-02-08 13:57:50,984 | INFO     | did not find any defunct processes belonging to 11410
[2026-02-08 14:58:30] 2026-02-08 13:57:50,987 | INFO     | did not find any defunct processes belonging to 11410
[2026-02-08 14:58:30] 2026-02-08 13:57:50,987 | INFO     | ready for new job
[2026-02-08 14:58:30] 2026-02-08 13:57:50,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 14:58:30] 2026-02-08 13:57:50,989 | INFO     | **************************************
[2026-02-08 14:58:30] 2026-02-08 13:57:50,990 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 14:58:30] 2026-02-08 13:57:50,990 | INFO     | **************************************
[2026-02-08 14:58:30] 2026-02-08 13:57:50,990 | INFO     | 
[2026-02-08 14:58:30] 2026-02-08 13:57:50,990 | INFO     | pilot is running in a VM
[2026-02-08 14:58:30] 2026-02-08 13:57:50,991 | INFO     | architecture information:
[2026-02-08 14:58:30] 2026-02-08 13:57:51,003 | INFO     | executing command: cat /etc/os-release
[2026-02-08 14:58:30] 2026-02-08 13:57:51,181 | INFO     | cat /etc/os-release:
[2026-02-08 14:58:30] NAME="CentOS Linux"
[2026-02-08 14:58:30] VERSION="7 (Core)"
[2026-02-08 14:58:30] ID="centos"
[2026-02-08 14:58:30] ID_LIKE="rhel fedora"
[2026-02-08 14:58:30] VERSION_ID="7"
[2026-02-08 14:58:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 14:58:30] ANSI_COLOR="0;31"
[2026-02-08 14:58:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 14:58:30] HOME_URL="https://www.centos.org/"
[2026-02-08 14:58:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 14:58:30] 
[2026-02-08 14:58:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 14:58:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 14:58:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 14:58:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 14:58:30] 
[2026-02-08 14:58:30] 2026-02-08 13:57:51,182 | INFO     | **************************************
[2026-02-08 14:58:30] 2026-02-08 13:57:51,685 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-02-08 14:58:30] 2026-02-08 13:57:51,978 | INFO     | sufficient remaining disk space (495163801600 B)
[2026-02-08 14:58:30] 2026-02-08 13:57:51,979 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 14:58:30] 2026-02-08 13:57:51,979 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 14:58:30] 2026-02-08 13:57:51,979 | INFO     | update_server=False
[2026-02-08 14:58:30] 2026-02-08 13:57:51,979 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 14:58:30] 2026-02-08 13:57:51,980 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 14:58:30] 2026-02-08 13:57:51,980 | INFO     | aborting loop
[2026-02-08 14:58:30] 2026-02-08 13:57:52,382 | INFO     | all data control threads have been joined
[2026-02-08 14:58:30] 2026-02-08 13:57:52,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 14:58:30] 2026-02-08 13:57:52,806 | INFO     | all job control threads have been joined
[2026-02-08 14:58:30] 2026-02-08 13:57:52,985 | INFO     | [job] retrieve thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:52,986 | INFO     | [job] job monitor thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:53,005 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:53,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 14:58:30] 2026-02-08 13:57:53,313 | INFO     | [payload] failed_post thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:53,350 | INFO     | all payload control threads have been joined
[2026-02-08 14:58:30] 2026-02-08 13:57:53,388 | INFO     | [data] control thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:53,599 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:53,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 14:58:30] 2026-02-08 13:57:53,812 | INFO     | [job] control thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:53,931 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:53,985 | INFO     | [payload] validate_post thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:53,989 | INFO     | [job] validate thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:54,170 | INFO     | [data] copytool_in thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:54,355 | INFO     | [payload] control thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:54,479 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:54,692 | INFO     | [job] queue monitor thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:54,796 | INFO     | [data] copytool_out thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:57:57,158 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 14:58:30] 2026-02-08 13:58:20,032 | INFO     | [monitor] cgroup control has ended
[2026-02-08 14:58:30] 2026-02-08 13:58:20,408 | INFO     | PID=6907 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-08 14:58:30] 2026-02-08 13:58:20,408 | INFO     | .. there are 9 such processes running
[2026-02-08 14:58:30] 2026-02-08 13:58:20,408 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 14:58:30] 2026-02-08 13:58:20,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 14:58:30] 2026-02-08 13:58:20,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 14:58:30] 2026-02-08 13:58:21,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944760674112)>', '<ExcThread(monitor, started 139944152508160)>']
[2026-02-08 14:58:30] 2026-02-08 13:58:22,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 14:58:30] 2026-02-08 13:58:22,420 | INFO     | [monitor] control thread has ended
[2026-02-08 14:58:30] 2026-02-08 13:58:26,542 | INFO     | all workflow threads have been joined
[2026-02-08 14:58:30] 2026-02-08 13:58:26,542 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 14:58:30] 2026-02-08 13:58:26,542 | INFO     | traces error code: 0
[2026-02-08 14:58:30] 2026-02-08 13:58:26,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 14:58:30] 2026-02-08 13:58:26,811 [wrapper] ==== pilot stdout END ====
[2026-02-08 14:58:30] 2026-02-08 13:58:26,901 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 14:58:30] 2026-02-08 13:58:26,940 [wrapper] pilotpid: 6907
[2026-02-08 14:58:30] 2026-02-08 13:58:26,979 [wrapper] Pilot exit status: 0
[2026-02-08 14:58:30] 2026-02-08 13:58:27,251 [wrapper] pandaids: 7000834398
[2026-02-08 14:58:30] 2026-02-08 13:58:28,149 [wrapper] cleanup supervisor_pilot 19368 6908
[2026-02-08 14:58:30] 2026-02-08 13:58:28,231 [wrapper] Test setup, not cleaning
[2026-02-08 14:58:30] 2026-02-08 13:58:28,328 [wrapper] apfmon messages muted
[2026-02-08 14:58:30] 2026-02-08 13:58:28,435 [wrapper] ==== wrapper stdout END ====
[2026-02-08 14:58:30] 2026-02-08 13:58:28,520 [wrapper] ==== wrapper stderr END ====
[2026-02-08 14:58:30]  *** Error codes and diagnostics ***
[2026-02-08 14:58:30]     "exeErrorCode": 0,
[2026-02-08 14:58:30]     "exeErrorDiag": "",
[2026-02-08 14:58:30]     "pilotErrorCode": 0,
[2026-02-08 14:58:30]     "pilotErrorDiag": "",
[2026-02-08 14:58:30]  *** Listing of results directory ***
[2026-02-08 14:58:30] total 674896
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc    584627 Feb  7 16:47 pilot3.tar.gz
[2026-02-08 14:58:30] -rwx------. 1 boinc boinc     36322 Feb  7 16:49 runpilot2-wrapper.sh
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc      5111 Feb  7 16:50 queuedata.json
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc       100 Feb  8 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 14:58:30] -rwxr-xr-x. 1 boinc boinc      7986 Feb  8 10:57 run_atlas
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc       105 Feb  8 10:57 job.xml
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc      6391 Feb  8 10:57 init_data.xml
[2026-02-08 14:58:30] -rw-r--r--. 2 boinc boinc 501857924 Feb  8 10:57 EVNT.48442096._000094.pool.root.1
[2026-02-08 14:58:30] -rw-r--r--. 2 boinc boinc     15845 Feb  8 10:57 start_atlas.sh
[2026-02-08 14:58:30] drwxrwx--x. 2 boinc boinc        68 Feb  8 10:57 shared
[2026-02-08 14:58:30] -rw-r--r--. 2 boinc boinc    597954 Feb  8 10:57 input.tar.gz
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc         0 Feb  8 10:57 boinc_lockfile
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc      2529 Feb  8 10:57 pandaJob.out
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc       415 Feb  8 11:02 workernode_map.json
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc   1009518 Feb  8 11:02 agis_schedconf.cvmfs.json
[2026-02-08 14:58:30] drwx------. 5 boinc boinc      4096 Feb  8 11:02 pilot3
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc 180394351 Feb  8 14:56 HITS.48442098._004710.pool.root.1
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc       532 Feb  8 14:57 boinc_task_state.xml
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc      1013 Feb  8 14:57 memory_monitor_summary.json
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc   1513088 Feb  8 14:57 agis_ddmendpoints.agis.ALL.json
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc    483392 Feb  8 14:57 log.48442098._004710.job.log.tgz.1
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc        95 Feb  8 14:57 pilot_heartbeat.json
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc      6316 Feb  8 14:57 heartbeat.json
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc        28 Feb  8 14:58 wrapper_checkpoint.txt
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc      8192 Feb  8 14:58 boinc_mmap_file
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc      4879 Feb  8 14:58 pilotlog.txt
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc   1972390 Feb  8 14:58 log.48442098._004710.job.log.1
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc       357 Feb  8 14:58 output.list
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc       620 Feb  8 14:58 runtime_log
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc   2478080 Feb  8 14:58 result.tar.gz
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc      8816 Feb  8 14:58 runtime_log.err
[2026-02-08 14:58:30] -rw-------. 1 boinc boinc       656 Feb  8 14:58 Di3NDmKkz88n9Rq4apOajLDm4fhM0noT9bVooX4SDmqGbKDmEj8Q2m.diag
[2026-02-08 14:58:30] -rw-r--r--. 1 boinc boinc     20688 Feb  8 14:58 stderr.txt
[2026-02-08 14:58:31] HITS file was successfully produced:
[2026-02-08 14:58:31] -rw-------. 1 boinc boinc 180394351 Feb  8 14:56 shared/HITS.pool.root.1
[2026-02-08 14:58:31]  *** Contents of shared directory: ***
[2026-02-08 14:58:31] total 669284
[2026-02-08 14:58:31] -rw-r--r--. 2 boinc boinc 501857924 Feb  8 10:57 ATLAS.root_0
[2026-02-08 14:58:31] -rw-r--r--. 2 boinc boinc     15845 Feb  8 10:57 start_atlas.sh
[2026-02-08 14:58:31] -rw-r--r--. 2 boinc boinc    597954 Feb  8 10:57 input.tar.gz
[2026-02-08 14:58:31] -rw-------. 1 boinc boinc 180394351 Feb  8 14:56 HITS.pool.root.1
[2026-02-08 14:58:31] -rw-------. 1 boinc boinc   2478080 Feb  8 14:58 result.tar.gz
14:58:32 (2787): run_atlas exited; CPU time 54244.774626
14:58:32 (2787): called boinc_finish(0)

</stderr_txt>
]]>

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