Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:22:08 (15040): wrapper (7.7.26015): starting
16:22:08 (15040): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 16:22:08] Arguments: --nthreads 8
[2026-02-07 16:22:08] Threads: 8
[2026-02-07 16:22:08] Checking for CVMFS
[2026-02-07 16:22:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 16:22:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 16:22:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 16:22:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 16:22:09] 2.11.2.0 13467 30917 87368 155996 0 49 13849516 20275201 1 130560 0 9673114 99.840 3226749 30260 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 16:22:09] CVMFS is ok
[2026-02-07 16:22:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 16:22:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 16:22:09] Further information can be found at the LHC@home message board.
[2026-02-07 16:22:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 16:22:09] Checking for apptainer binary...
[2026-02-07 16:22:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 16:22:09] Running /usr/bin/apptainer --version
[2026-02-07 16:22:09] apptainer version 1.3.2-1.el7
[2026-02-07 16:22:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 16:22:11] c-204-33.aglt2.org
[2026-02-07 16:22:11] apptainer works
[2026-02-07 16:22:11] Set ATHENA_PROC_NUMBER=8
[2026-02-07 16:22:11] Set ATHENA_CORE_NUMBER=8
[2026-02-07 16:22:11] Starting ATLAS job with PandaID=7004059736
[2026-02-07 16:22:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 18:35:52]  *** The last 200 lines of the pilot log: ***
[2026-02-07 18:35:52] 2026-02-07 23:35:05,705 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7004059736/jobReport.json
[2026-02-07 18:35:52] 2026-02-07 23:35:05,708 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-07 18:35:52] 2026-02-07 23:35:05,709 | INFO     | this job has now completed (state=finished)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,709 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,709 | INFO     | log transfer has been attempted: DONE
[2026-02-07 18:35:52] 2026-02-07 23:35:05,709 | INFO     | job 7004059736 has finished - writing final server update
[2026-02-07 18:35:52] 2026-02-07 23:35:05,709 | INFO     | total number of processed events: 400 (read)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,712 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7004059736/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,712 | INFO     | extracted standard info from prmon json
[2026-02-07 18:35:52] 2026-02-07 23:35:05,713 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 18:35:52] 2026-02-07 23:35:05,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 18:35:52] 2026-02-07 23:35:05,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 18:35:52] 2026-02-07 23:35:05,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 18:35:52] 2026-02-07 23:35:05,716 | INFO     | fitting pss+swap vs Time
[2026-02-07 18:35:52] 2026-02-07 23:35:05,716 | INFO     | sum of square deviations: 681212772.5
[2026-02-07 18:35:52] 2026-02-07 23:35:05,717 | INFO     | sum of deviations: -8464999981.499997
[2026-02-07 18:35:52] 2026-02-07 23:35:05,717 | INFO     | mean x: 1770503313.5
[2026-02-07 18:35:52] 2026-02-07 23:35:05,717 | INFO     | mean y: 2581417.0692307693
[2026-02-07 18:35:52] 2026-02-07 23:35:05,718 | INFO     | intersect: 22003505535.12543
[2026-02-07 18:35:52] 2026-02-07 23:35:05,718 | INFO     | chi2: 1.620858402293013
[2026-02-07 18:35:52] 2026-02-07 23:35:05,718 | INFO     | sum of square deviations: 605592750.0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,719 | INFO     | sum of deviations: -7358529674.000001
[2026-02-07 18:35:52] 2026-02-07 23:35:05,719 | INFO     | mean x: 1770503161.0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,719 | INFO     | mean y: 2583649.64
[2026-02-07 18:35:52] 2026-02-07 23:35:05,719 | INFO     | intersect: 21515886191.8671
[2026-02-07 18:35:52] 2026-02-07 23:35:05,720 | INFO     | chi2: 1.6215639129746648
[2026-02-07 18:35:52] 2026-02-07 23:35:05,720 | INFO     | current chi2=1.6215639129746648 (change=-0.04352697809097522 %)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,720 | INFO     | right removable region: 124
[2026-02-07 18:35:52] 2026-02-07 23:35:05,720 | INFO     | sum of square deviations: 605592750.0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,721 | INFO     | sum of deviations: -28455276095.999996
[2026-02-07 18:35:52] 2026-02-07 23:35:05,721 | INFO     | mean x: 1770503466.0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,721 | INFO     | mean y: 2621036.88
[2026-02-07 18:35:52] 2026-02-07 23:35:05,721 | INFO     | intersect: 83194113923.73332
[2026-02-07 18:35:52] 2026-02-07 23:35:05,722 | INFO     | chi2: 0.13227689655259572
[2026-02-07 18:35:52] 2026-02-07 23:35:05,722 | INFO     | current chi2=0.13227689655259572 (change=91.83908376169906 %)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,722 | INFO     | sum of square deviations: 535786790.0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,723 | INFO     | sum of deviations: -27427386201.999996
[2026-02-07 18:35:52] 2026-02-07 23:35:05,723 | INFO     | mean x: 1770503618.5
[2026-02-07 18:35:52] 2026-02-07 23:35:05,723 | INFO     | mean y: 2618701.3
[2026-02-07 18:35:52] 2026-02-07 23:35:05,723 | INFO     | intersect: 90636220393.19308
[2026-02-07 18:35:52] 2026-02-07 23:35:05,723 | INFO     | chi2: 0.11244847561485201
[2026-02-07 18:35:52] 2026-02-07 23:35:05,724 | INFO     | current chi2=0.11244847561485201 (change=14.990086292098312 %)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,724 | INFO     | left removable region: 20
[2026-02-07 18:35:52] 2026-02-07 23:35:05,724 | INFO     | sum of square deviations: 348769330.0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,724 | INFO     | sum of deviations: -19804629904.0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,725 | INFO     | mean x: 1770503740.5
[2026-02-07 18:35:52] 2026-02-07 23:35:05,725 | INFO     | mean y: 2608116.0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,725 | INFO     | intersect: 100539462443.90251
[2026-02-07 18:35:52] 2026-02-07 23:35:05,725 | INFO     | chi2: 0.10377236107533795
[2026-02-07 18:35:52] 2026-02-07 23:35:05,725 | INFO     | current memory leak: -56.78 B/s (using 104 data points, chi2=0.10)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,726 | INFO     | could have reported an average CPU frequency of 1762 MHz (8 samples)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,726 | INFO     | ..............................
[2026-02-07 18:35:52] 2026-02-07 23:35:05,726 | INFO     | . Timing measurements:
[2026-02-07 18:35:52] 2026-02-07 23:35:05,726 | INFO     | . get job = 0 s
[2026-02-07 18:35:52] 2026-02-07 23:35:05,726 | INFO     | . initial setup = 8 s
[2026-02-07 18:35:52] 2026-02-07 23:35:05,726 | INFO     | . payload setup = 8 s
[2026-02-07 18:35:52] 2026-02-07 23:35:05,726 | INFO     | . stage-in = 0 s
[2026-02-07 18:35:52] 2026-02-07 23:35:05,726 | INFO     | . payload execution = 7924 s
[2026-02-07 18:35:52] 2026-02-07 23:35:05,727 | INFO     | . stage-out = 0 s
[2026-02-07 18:35:52] 2026-02-07 23:35:05,727 | INFO     | . log creation = 0 s
[2026-02-07 18:35:52] 2026-02-07 23:35:05,727 | INFO     | ..............................
[2026-02-07 18:35:52] 2026-02-07 23:35:05,811 | INFO     | 
[2026-02-07 18:35:52] 2026-02-07 23:35:05,811 | INFO     | job summary report
[2026-02-07 18:35:52] 2026-02-07 23:35:05,812 | INFO     | --------------------------------------------------
[2026-02-07 18:35:52] 2026-02-07 23:35:05,812 | INFO     | PanDA job id: 7004059736
[2026-02-07 18:35:52] 2026-02-07 23:35:05,812 | INFO     | task id: 48317952
[2026-02-07 18:35:52] 2026-02-07 23:35:05,812 | INFO     | errors: (none)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,812 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 18:35:52] 2026-02-07 23:35:05,812 | INFO     | pilot state: finished 
[2026-02-07 18:35:52] 2026-02-07 23:35:05,813 | INFO     | transexitcode: 0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,813 | INFO     | exeerrorcode: 0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,813 | INFO     | exeerrordiag: 
[2026-02-07 18:35:52] 2026-02-07 23:35:05,813 | INFO     | exitcode: 0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,813 | INFO     | exitmsg: OK
[2026-02-07 18:35:52] 2026-02-07 23:35:05,813 | INFO     | cpuconsumptiontime: 59678 s
[2026-02-07 18:35:52] 2026-02-07 23:35:05,814 | INFO     | nevents: 400
[2026-02-07 18:35:52] 2026-02-07 23:35:05,814 | INFO     | neventsw: 0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,814 | INFO     | pid: 23106
[2026-02-07 18:35:52] 2026-02-07 23:35:05,814 | INFO     | pgrp: 23106
[2026-02-07 18:35:52] 2026-02-07 23:35:05,814 | INFO     | corecount: 8
[2026-02-07 18:35:52] 2026-02-07 23:35:05,814 | INFO     | event service: False
[2026-02-07 18:35:52] 2026-02-07 23:35:05,815 | INFO     | sizes: {0: 2282659, 1: 2283120, 11: 2283120, 7936: 2310801, 7938: 2319799, 7939: 2319855, 7941: 2320177}
[2026-02-07 18:35:52] 2026-02-07 23:35:05,815 | INFO     | --------------------------------------------------
[2026-02-07 18:35:52] 2026-02-07 23:35:05,815 | INFO     | 
[2026-02-07 18:35:52] 2026-02-07 23:35:05,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 18:35:52] 2026-02-07 23:35:05,842 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,842 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,842 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,845 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,845 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 18:35:52] 2026-02-07 23:35:05,846 | INFO     | job 7004059736 has completed (purged errors)
[2026-02-07 18:35:52] 2026-02-07 23:35:05,846 | INFO     | overall cleanup function is called
[2026-02-07 18:35:52] 2026-02-07 23:35:06,854 | INFO     | --- collectZombieJob: --- 10, [23106]
[2026-02-07 18:35:52] 2026-02-07 23:35:06,854 | INFO     | zombie collector waiting for pid 23106
[2026-02-07 18:35:52] 2026-02-07 23:35:06,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 18:35:52] 2026-02-07 23:35:06,855 | INFO     | collected zombie processes
[2026-02-07 18:35:52] 2026-02-07 23:35:06,855 | INFO     | will attempt to kill all subprocesses of pid=23106
[2026-02-07 18:35:52] 2026-02-07 23:35:07,039 | WARNING  | process 23106 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 18:35:52] 2026-02-07 23:35:07,106 | INFO     | process IDs to be killed: [23106] (in reverse order)
[2026-02-07 18:35:52] 2026-02-07 23:35:07,160 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 18:35:52] 2026-02-07 23:35:07,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 18:35:52] 2026-02-07 23:35:07,167 | INFO     | did not find any defunct processes belonging to 23106
[2026-02-07 18:35:52] 2026-02-07 23:35:07,176 | INFO     | did not find any defunct processes belonging to 23106
[2026-02-07 18:35:52] 2026-02-07 23:35:07,176 | INFO     | ready for new job
[2026-02-07 18:35:52] 2026-02-07 23:35:07,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 18:35:52] 2026-02-07 23:35:07,178 | INFO     | **************************************
[2026-02-07 18:35:52] 2026-02-07 23:35:07,179 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 18:35:52] 2026-02-07 23:35:07,179 | INFO     | **************************************
[2026-02-07 18:35:52] 2026-02-07 23:35:07,179 | INFO     | 
[2026-02-07 18:35:52] 2026-02-07 23:35:07,180 | INFO     | architecture information:
[2026-02-07 18:35:52] 2026-02-07 23:35:07,180 | INFO     | executing command: cat /etc/os-release
[2026-02-07 18:35:52] 2026-02-07 23:35:07,188 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 18:35:52] 2026-02-07 23:35:07,198 | INFO     | cat /etc/os-release:
[2026-02-07 18:35:52] NAME="CentOS Linux"
[2026-02-07 18:35:52] VERSION="7 (Core)"
[2026-02-07 18:35:52] ID="centos"
[2026-02-07 18:35:52] ID_LIKE="rhel fedora"
[2026-02-07 18:35:52] VERSION_ID="7"
[2026-02-07 18:35:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 18:35:52] ANSI_COLOR="0;31"
[2026-02-07 18:35:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 18:35:52] HOME_URL="https://www.centos.org/"
[2026-02-07 18:35:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 18:35:52] 
[2026-02-07 18:35:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 18:35:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 18:35:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 18:35:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 18:35:52] 
[2026-02-07 18:35:52] 2026-02-07 23:35:07,198 | INFO     | **************************************
[2026-02-07 18:35:52] 2026-02-07 23:35:07,284 | INFO     | number of running child processes to parent process 23106: 1
[2026-02-07 18:35:52] 2026-02-07 23:35:07,284 | INFO     | maximum number of monitored processes: 6
[2026-02-07 18:35:52] 2026-02-07 23:35:07,284 | INFO     | aborting job monitoring since job object (job id=7004059736) has expired
[2026-02-07 18:35:52] 2026-02-07 23:35:07,701 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 18:35:52] 2026-02-07 23:35:07,721 | INFO     | sufficient remaining disk space (18020827136 B)
[2026-02-07 18:35:52] 2026-02-07 23:35:07,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 18:35:52] 2026-02-07 23:35:07,722 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 18:35:52] 2026-02-07 23:35:07,722 | INFO     | update_server=False
[2026-02-07 18:35:52] 2026-02-07 23:35:07,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 18:35:52] 2026-02-07 23:35:07,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 18:35:52] 2026-02-07 23:35:07,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 18:35:52] 2026-02-07 23:35:07,723 | INFO     | will abort loop
[2026-02-07 18:35:52] 2026-02-07 23:35:07,918 | INFO     | all data control threads have been joined
[2026-02-07 18:35:52] 2026-02-07 23:35:08,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 18:35:52] 2026-02-07 23:35:08,656 | INFO     | all payload control threads have been joined
[2026-02-07 18:35:52] 2026-02-07 23:35:08,724 | INFO     | [job] queue monitor thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:08,727 | INFO     | [job] retrieve thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:08,728 | INFO     | [job] job monitor thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:08,922 | INFO     | [data] control thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:08,997 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:09,129 | INFO     | [payload] failed_post thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:09,185 | INFO     | [job] validate thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:09,199 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:09,219 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:09,253 | INFO     | all job control threads have been joined
[2026-02-07 18:35:52] 2026-02-07 23:35:09,330 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:09,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 18:35:52] 2026-02-07 23:35:09,661 | INFO     | [payload] control thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:09,663 | INFO     | [data] copytool_in thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:09,811 | INFO     | [payload] validate_post thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:10,256 | INFO     | [job] control thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:10,523 | INFO     | [data] copytool_out thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:13,359 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 18:35:52] 2026-02-07 23:35:37,727 | INFO     | PID=18715 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 18:35:52] 2026-02-07 23:35:37,728 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 18:35:52] 2026-02-07 23:35:37,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 18:35:52] 2026-02-07 23:35:37,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 18:35:52] 2026-02-07 23:35:45,878 | INFO     | [monitor] cgroup control has ended
[2026-02-07 18:35:52] 2026-02-07 23:35:47,563 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139776842417984)>', '<ExcThread(monitor, started 139776279701248)>']
[2026-02-07 18:35:52] 2026-02-07 23:35:47,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 18:35:52] 2026-02-07 23:35:47,769 | INFO     | [monitor] control thread has ended
[2026-02-07 18:35:52] 2026-02-07 23:35:52,575 | INFO     | all workflow threads have been joined
[2026-02-07 18:35:52] 2026-02-07 23:35:52,575 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 18:35:52] 2026-02-07 23:35:52,575 | INFO     | traces error code: 0
[2026-02-07 18:35:52] 2026-02-07 23:35:52,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 18:35:52] 2026-02-07 23:35:52,676 [wrapper] ==== pilot stdout END ====
[2026-02-07 18:35:52] 2026-02-07 23:35:52,681 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 18:35:52] 2026-02-07 23:35:52,686 [wrapper] pilotpid: 18715
[2026-02-07 18:35:52] 2026-02-07 23:35:52,690 [wrapper] Pilot exit status: 0
[2026-02-07 18:35:52] 2026-02-07 23:35:52,708 [wrapper] pandaids: 7004059736
[2026-02-07 18:35:52] 2026-02-07 23:35:52,760 [wrapper] cleanup supervisor_pilot  4673 18716
[2026-02-07 18:35:52] 2026-02-07 23:35:52,765 [wrapper] Test setup, not cleaning
[2026-02-07 18:35:52] 2026-02-07 23:35:52,769 [wrapper] apfmon messages muted
[2026-02-07 18:35:52] 2026-02-07 23:35:52,773 [wrapper] ==== wrapper stdout END ====
[2026-02-07 18:35:52] 2026-02-07 23:35:52,778 [wrapper] ==== wrapper stderr END ====
[2026-02-07 18:35:52]  *** Error codes and diagnostics ***
[2026-02-07 18:35:52]     "exeErrorCode": 0,
[2026-02-07 18:35:52]     "exeErrorDiag": "",
[2026-02-07 18:35:52]     "pilotErrorCode": 0,
[2026-02-07 18:35:52]     "pilotErrorDiag": "",
[2026-02-07 18:35:52]  *** Listing of results directory ***
[2026-02-07 18:35:52] total 671072
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas    584627 Feb  6 11:59 pilot3.tar.gz
[2026-02-07 18:35:52] -rwx------ 1 boincer umatlas     36322 Feb  6 11:59 runpilot2-wrapper.sh
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas      5111 Feb  6 12:00 queuedata.json
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas       100 Feb  7 16:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 18:35:52] -rwxr-xr-x 1 boincer umatlas      7986 Feb  7 16:22 run_atlas
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas       105 Feb  7 16:22 job.xml
[2026-02-07 18:35:52] -rw-r--r-- 2 boincer umatlas 495752841 Feb  7 16:22 EVNT.48317949._000268.pool.root.1
[2026-02-07 18:35:52] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 16:22 start_atlas.sh
[2026-02-07 18:35:52] drwxrwx--x 2 boincer umatlas      4096 Feb  7 16:22 shared
[2026-02-07 18:35:52] -rw-r--r-- 2 boincer umatlas    597947 Feb  7 16:22 input.tar.gz
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas         0 Feb  7 16:22 boinc_lockfile
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas      2524 Feb  7 16:22 pandaJob.out
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas        57 Feb  7 16:22 setup.sh.local
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas   1009510 Feb  7 16:22 agis_schedconf.cvmfs.json
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas   1513088 Feb  7 16:22 agis_ddmendpoints.agis.ALL.json
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas       433 Feb  7 16:22 workernode_map.json
[2026-02-07 18:35:52] drwx------ 5 boincer umatlas      4096 Feb  7 16:22 pilot3
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas      5909 Feb  7 18:31 init_data.xml
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas 184444869 Feb  7 18:34 HITS.48317952._014271.pool.root.1
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas       530 Feb  7 18:34 boinc_task_state.xml
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas      1048 Feb  7 18:34 memory_monitor_summary.json
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas    398744 Feb  7 18:35 log.48317952._014271.job.log.tgz.1
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas      6404 Feb  7 18:35 heartbeat.json
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas        95 Feb  7 18:35 pilot_heartbeat.json
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas      8192 Feb  7 18:35 boinc_mmap_file
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas        27 Feb  7 18:35 wrapper_checkpoint.txt
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas      5147 Feb  7 18:35 pilotlog.txt
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas   1120609 Feb  7 18:35 log.48317952._014271.job.log.1
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas       357 Feb  7 18:35 output.list
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas       620 Feb  7 18:35 runtime_log
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas   1536000 Feb  7 18:35 result.tar.gz
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas      9341 Feb  7 18:35 runtime_log.err
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas       659 Feb  7 18:35 pM1NDmPMe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSLZKDmXlWfFn.diag
[2026-02-07 18:35:52] -rw-r--r-- 1 boincer umatlas     21263 Feb  7 18:35 stderr.txt
[2026-02-07 18:35:52] HITS file was successfully produced:
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas 184444869 Feb  7 18:34 shared/HITS.pool.root.1
[2026-02-07 18:35:52]  *** Contents of shared directory: ***
[2026-02-07 18:35:52] total 666364
[2026-02-07 18:35:52] -rw-r--r-- 2 boincer umatlas 495752841 Feb  7 16:22 ATLAS.root_0
[2026-02-07 18:35:52] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 16:22 start_atlas.sh
[2026-02-07 18:35:52] -rw-r--r-- 2 boincer umatlas    597947 Feb  7 16:22 input.tar.gz
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas 184444869 Feb  7 18:34 HITS.pool.root.1
[2026-02-07 18:35:52] -rw------- 1 boincer umatlas   1536000 Feb  7 18:35 result.tar.gz
18:35:54 (15040): run_atlas exited; CPU time 59635.991092
18:35:54 (15040): called boinc_finish(0)

</stderr_txt>
]]>

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