Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:28:30 (18909): wrapper (7.7.26015): starting
02:28:30 (18909): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 02:28:30] Arguments: --nthreads 8
[2026-02-08 02:28:30] Threads: 8
[2026-02-08 02:28:30] Checking for CVMFS
[2026-02-08 02:28:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 02:28:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 02:28:30] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 02:28:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 02:28:30] 2.11.0.0 7941 171576 91588 156002 3 1 2677754 4096001 0 130560 3 9389190 99.384 11247750 483 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-08 02:28:30] CVMFS is ok
[2026-02-08 02:28:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 02:28:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 02:28:30] Further information can be found at the LHC@home message board.
[2026-02-08 02:28:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 02:28:30] Checking for apptainer binary...
[2026-02-08 02:28:30] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-08 02:28:30] apptainer is not installed, using version from CVMFS
[2026-02-08 02:28:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 02:29:35] WARNING: Environment variable TMPDIR already has value [/tmp/job_11082541/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node090
[2026-02-08 02:29:35] apptainer works
[2026-02-08 02:29:35] Set ATHENA_PROC_NUMBER=8
[2026-02-08 02:29:35] Set ATHENA_CORE_NUMBER=8
[2026-02-08 02:29:35] Starting ATLAS job with PandaID=7004059726
[2026-02-08 02:29:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11082541/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 03:55:52]  *** The last 200 lines of the pilot log: ***
[2026-02-08 03:55:52]  filesize=337847
[2026-02-08 03:55:52]  filetype=log
[2026-02-08 03:55:52]  guid=df87d5ff-64ff-4227-acfd-c0aaca94bb58
[2026-02-08 03:55:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 03:55:52]  is_altstaged=None
[2026-02-08 03:55:52]  is_tar=False
[2026-02-08 03:55:52]  lfn=log.48317952._014261.job.log.tgz.1
[2026-02-08 03:55:52]  mtime=0
[2026-02-08 03:55:52]  protocol_id=None
[2026-02-08 03:55:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 03:55:52]  replicas=None
[2026-02-08 03:55:52]  scope=mc23_13p6TeV
[2026-02-08 03:55:52]  status=None
[2026-02-08 03:55:52]  status_code=0
[2026-02-08 03:55:52]  storage_token=
[2026-02-08 03:55:52]  surl=/tmp/job_11082541/atlas/pilot/slots/0/PanDA_Pilot-7004059726/log.48317952._014261.job.log.tgz.1
[2026-02-08 03:55:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/d5/log.48317952._014261.job.log.tgz.1
[2026-02-08 03:55:52]  workdir=None
[2026-02-08 03:55:52] ]
[2026-02-08 03:55:52] 2026-02-08 02:55:14,767 | INFO     | transferring file log.48317952._014261.job.log.tgz.1 from /tmp/job_11082541/atlas/pilot/slots/0/PanDA_Pilot-7004059726/log.48317952._014261.job.log.tgz.1 to /tmp/j
[2026-02-08 03:55:52] 2026-02-08 02:55:14,768 | INFO     | executing command: /usr/bin/env mv /tmp/job_11082541/atlas/pilot/slots/0/PanDA_Pilot-7004059726/log.48317952._014261.job.log.tgz.1 /tmp/job_11082541/atlas/pilot/sl
[2026-02-08 03:55:52] 2026-02-08 02:55:14,775 | INFO     | adding to output.list: log.48317952._014261.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/d5/log.48317952._014261.job.log.tg
[2026-02-08 03:55:52] 2026-02-08 02:55:14,775 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 03:55:52] 2026-02-08 02:55:14,776 | INFO     | summary of transferred files:
[2026-02-08 03:55:52] 2026-02-08 02:55:14,776 | INFO     |  -- lfn=log.48317952._014261.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 03:55:52] 2026-02-08 02:55:14,776 | INFO     | stage-out finished correctly
[2026-02-08 03:55:52] 2026-02-08 02:55:15,054 | INFO     | monitor loop #434: job 0:7004059726 is in state 'finished'
[2026-02-08 03:55:52] 2026-02-08 02:55:15,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 03:55:52] 2026-02-08 02:55:15,527 | INFO     | time since job start (5016s) is within the limit (349056.0s)
[2026-02-08 03:55:52] 2026-02-08 02:55:16,365 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 03:55:52] 2026-02-08 02:55:16,412 | INFO     | job 7004059726 has state=finished
[2026-02-08 03:55:52] 2026-02-08 02:55:16,412 | INFO     | preparing for final server update for job 7004059726 in state='finished'
[2026-02-08 03:55:52] 2026-02-08 02:55:16,412 | INFO     | reading metadata from: /tmp/job_11082541/atlas/pilot/slots/0/PanDA_Pilot-7004059726/jobReport.json
[2026-02-08 03:55:52] 2026-02-08 02:55:16,414 | INFO     | added worker_node to metadata from /tmp/job_11082541/atlas/pilot/slots/0/workernode_map.json
[2026-02-08 03:55:52] 2026-02-08 02:55:16,414 | INFO     | this job has now completed (state=finished)
[2026-02-08 03:55:52] 2026-02-08 02:55:16,414 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 03:55:52] 2026-02-08 02:55:16,414 | INFO     | log transfer has been attempted: DONE
[2026-02-08 03:55:52] 2026-02-08 02:55:16,414 | INFO     | job 7004059726 has finished - writing final server update
[2026-02-08 03:55:52] 2026-02-08 02:55:16,414 | INFO     | total number of processed events: 400 (read)
[2026-02-08 03:55:52] 2026-02-08 02:55:16,431 | INFO     | using path: /tmp/job_11082541/atlas/pilot/slots/0/PanDA_Pilot-7004059726/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 03:55:52] 2026-02-08 02:55:16,431 | INFO     | extracted standard info from prmon json
[2026-02-08 03:55:52] 2026-02-08 02:55:16,431 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 03:55:52] 2026-02-08 02:55:16,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 03:55:52] 2026-02-08 02:55:16,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 03:55:52] 2026-02-08 02:55:16,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 03:55:52] 2026-02-08 02:55:16,432 | INFO     | fitting pss+swap vs Time
[2026-02-08 03:55:52] 2026-02-08 02:55:16,432 | INFO     | sum of square deviations: 115715658.0
[2026-02-08 03:55:52] 2026-02-08 02:55:16,432 | INFO     | sum of deviations: 68593604032.0
[2026-02-08 03:55:52] 2026-02-08 02:55:16,432 | INFO     | mean x: 1770516963.5
[2026-02-08 03:55:52] 2026-02-08 02:55:16,432 | INFO     | mean y: 1914334.9722222222
[2026-02-08 03:55:52] 2026-02-08 02:55:16,432 | INFO     | intersect: -1049520178226.2435
[2026-02-08 03:55:52] 2026-02-08 02:55:16,432 | INFO     | chi2: 9.898403573119676
[2026-02-08 03:55:52] 2026-02-08 02:55:16,432 | INFO     | current memory leak: 592.78 B/s (using 72 data points, chi2=9.90)
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | could have reported an average CPU frequency of 2379 MHz (6 samples)
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | ..............................
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | . Timing measurements:
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | . get job = 0 s
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | . initial setup = 12 s
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | . payload setup = 176 s
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | . stage-in = 0 s
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | . payload execution = 4823 s
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | . stage-out = 0 s
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | . log creation = 0 s
[2026-02-08 03:55:52] 2026-02-08 02:55:16,433 | INFO     | ..............................
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | 
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | job summary report
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | --------------------------------------------------
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | PanDA job id: 7004059726
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | task id: 48317952
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | errors: (none)
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | pilot state: finished 
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | transexitcode: 0
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | exeerrorcode: 0
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | exeerrordiag: 
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | exitcode: 0
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | exitmsg: OK
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | cpuconsumptiontime: 22215 s
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | nevents: 400
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | neventsw: 0
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | pid: 4861
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | pgrp: 4861
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | corecount: 8
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | event service: False
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | sizes: {0: 2282672, 1: 2283244, 12: 2283244, 5003: 2318542, 5005: 2318736}
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | --------------------------------------------------
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | 
[2026-02-08 03:55:52] 2026-02-08 02:55:16,906 | INFO     | executing command: ls -lF /tmp/job_11082541/atlas/pilot/slots/0
[2026-02-08 03:55:52] 2026-02-08 02:55:16,915 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 03:55:52] 2026-02-08 02:55:16,916 | INFO     | job 7004059726 has completed (purged errors)
[2026-02-08 03:55:52] 2026-02-08 02:55:16,917 | INFO     | overall cleanup function is called
[2026-02-08 03:55:52] 2026-02-08 02:55:17,922 | INFO     | --- collectZombieJob: --- 10, [4861]
[2026-02-08 03:55:52] 2026-02-08 02:55:17,923 | INFO     | zombie collector waiting for pid 4861
[2026-02-08 03:55:52] 2026-02-08 02:55:17,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 03:55:52] 2026-02-08 02:55:17,923 | INFO     | collected zombie processes
[2026-02-08 03:55:52] 2026-02-08 02:55:17,923 | INFO     | will attempt to kill all subprocesses of pid=4861
[2026-02-08 03:55:52] 2026-02-08 02:55:18,017 | INFO     | process IDs to be killed: [4861] (in reverse order)
[2026-02-08 03:55:52] 2026-02-08 02:55:18,050 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 03:55:52] 2026-02-08 02:55:18,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 03:55:52] 2026-02-08 02:55:18,053 | INFO     | did not find any defunct processes belonging to 4861
[2026-02-08 03:55:52] 2026-02-08 02:55:18,056 | INFO     | did not find any defunct processes belonging to 4861
[2026-02-08 03:55:52] 2026-02-08 02:55:18,056 | INFO     | ready for new job
[2026-02-08 03:55:52] 2026-02-08 02:55:18,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 03:55:52] 2026-02-08 02:55:18,057 | INFO     | **************************************
[2026-02-08 03:55:52] 2026-02-08 02:55:18,057 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 03:55:52] 2026-02-08 02:55:18,057 | INFO     | **************************************
[2026-02-08 03:55:52] 2026-02-08 02:55:18,057 | INFO     | 
[2026-02-08 03:55:52] 2026-02-08 02:55:18,070 | INFO     | architecture information:
[2026-02-08 03:55:52] 2026-02-08 02:55:18,070 | INFO     | executing command: cat /etc/os-release
[2026-02-08 03:55:52] 2026-02-08 02:55:18,076 | INFO     | cat /etc/os-release:
[2026-02-08 03:55:52] NAME="CentOS Linux"
[2026-02-08 03:55:52] VERSION="7 (Core)"
[2026-02-08 03:55:52] ID="centos"
[2026-02-08 03:55:52] ID_LIKE="rhel fedora"
[2026-02-08 03:55:52] VERSION_ID="7"
[2026-02-08 03:55:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 03:55:52] ANSI_COLOR="0;31"
[2026-02-08 03:55:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 03:55:52] HOME_URL="https://www.centos.org/"
[2026-02-08 03:55:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 03:55:52] 
[2026-02-08 03:55:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 03:55:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 03:55:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 03:55:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 03:55:52] 
[2026-02-08 03:55:52] 2026-02-08 02:55:18,076 | INFO     | **************************************
[2026-02-08 03:55:52] 2026-02-08 02:55:18,579 | INFO     | executing command: df -mP /tmp/job_11082541/atlas/pilot/slots/0
[2026-02-08 03:55:52] 2026-02-08 02:55:18,585 | INFO     | sufficient remaining disk space (226753511424 B)
[2026-02-08 03:55:52] 2026-02-08 02:55:18,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 03:55:52] 2026-02-08 02:55:18,585 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 03:55:52] 2026-02-08 02:55:18,585 | INFO     | update_server=False
[2026-02-08 03:55:52] 2026-02-08 02:55:18,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 03:55:52] 2026-02-08 02:55:18,585 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 03:55:52] 2026-02-08 02:55:18,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 03:55:52] 2026-02-08 02:55:18,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 03:55:52] 2026-02-08 02:55:18,585 | INFO     | aborting loop
[2026-02-08 03:55:52] 2026-02-08 02:55:18,743 | INFO     | all data control threads have been joined
[2026-02-08 03:55:52] 2026-02-08 02:55:18,943 | INFO     | all job control threads have been joined
[2026-02-08 03:55:52] 2026-02-08 02:55:19,461 | INFO     | all payload control threads have been joined
[2026-02-08 03:55:52] 2026-02-08 02:55:19,590 | INFO     | [job] retrieve thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:19,591 | INFO     | [job] job monitor thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:19,748 | INFO     | [data] control thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:19,775 | INFO     | [data] copytool_in thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:19,862 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:19,948 | INFO     | [job] control thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:20,212 | INFO     | [payload] validate_post thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:20,299 | INFO     | [job] validate thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:20,366 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:20,389 | INFO     | [payload] failed_post thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:20,466 | INFO     | [payload] control thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:20,590 | INFO     | [data] copytool_out thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:20,706 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:20,730 | INFO     | job.realtimelogging is not enabled
[2026-02-08 03:55:52] 2026-02-08 02:55:21,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 03:55:52] 2026-02-08 02:55:21,735 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:22,495 | INFO     | [job] queue monitor thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:22,591 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 03:55:52] 2026-02-08 02:55:46,430 | INFO     | [monitor] cgroup control has ended
[2026-02-08 03:55:52] 2026-02-08 02:55:47,752 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-02-08 03:55:52] 2026-02-08 02:55:48,712 | INFO     | PID=23178 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-08 03:55:52] 2026-02-08 02:55:48,712 | INFO     | .. there are 2 such processes running
[2026-02-08 03:55:52] 2026-02-08 02:55:48,713 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 03:55:52] 2026-02-08 02:55:48,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 03:55:52] 2026-02-08 02:55:48,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 03:55:52] 2026-02-08 02:55:48,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 03:55:52] 2026-02-08 02:55:48,713 | INFO     | [monitor] control thread has ended
[2026-02-08 03:55:52] 2026-02-08 02:55:52,777 | INFO     | all workflow threads have been joined
[2026-02-08 03:55:52] 2026-02-08 02:55:52,777 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 03:55:52] 2026-02-08 02:55:52,778 | INFO     | traces error code: 0
[2026-02-08 03:55:52] 2026-02-08 02:55:52,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 03:55:52] 2026-02-08 02:55:52,830 [wrapper] ==== pilot stdout END ====
[2026-02-08 03:55:52] 2026-02-08 02:55:52,832 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 03:55:52] 2026-02-08 02:55:52,833 [wrapper] pilotpid: 23178
[2026-02-08 03:55:52] 2026-02-08 02:55:52,834 [wrapper] Pilot exit status: 0
[2026-02-08 03:55:52] 2026-02-08 02:55:52,838 [wrapper] pandaids: 7004059726
[2026-02-08 03:55:52] 2026-02-08 02:55:52,860 [wrapper] cleanup supervisor_pilot 13279 23179
[2026-02-08 03:55:52] 2026-02-08 02:55:52,861 [wrapper] Test setup, not cleaning
[2026-02-08 03:55:52] 2026-02-08 02:55:52,862 [wrapper] apfmon messages muted
[2026-02-08 03:55:52] 2026-02-08 02:55:52,864 [wrapper] ==== wrapper stdout END ====
[2026-02-08 03:55:52] 2026-02-08 02:55:52,865 [wrapper] ==== wrapper stderr END ====
[2026-02-08 03:55:52]  *** Error codes and diagnostics ***
[2026-02-08 03:55:52]     "exeErrorCode": 0,
[2026-02-08 03:55:52]     "exeErrorDiag": "",
[2026-02-08 03:55:52]     "pilotErrorCode": 0,
[2026-02-08 03:55:52]     "pilotErrorDiag": "",
[2026-02-08 03:55:52]  *** Listing of results directory ***
[2026-02-08 03:55:52] total 673900
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user    584627 Feb  6 17:59 pilot3.tar.gz
[2026-02-08 03:55:52] -rwx------ 1 mf493845 unix-user     36322 Feb  6 17:59 runpilot2-wrapper.sh
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user      5111 Feb  6 18:00 queuedata.json
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user       100 Feb  8 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 03:55:52] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb  8 00:22 run_atlas
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user       105 Feb  8 00:22 job.xml
[2026-02-08 03:55:52] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  8 02:28 start_atlas.sh
[2026-02-08 03:55:52] drwxrwx--x 2 mf493845 unix-user       100 Feb  8 02:28 shared
[2026-02-08 03:55:52] -rw-r--r-- 2 mf493845 unix-user    597944 Feb  8 02:28 input.tar.gz
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user      6390 Feb  8 02:28 init_data.xml
[2026-02-08 03:55:52] -rw-r--r-- 2 mf493845 unix-user 495752841 Feb  8 02:28 EVNT.48317949._000268.pool.root.1
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user         0 Feb  8 02:28 boinc_setup_complete
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user      8192 Feb  8 02:28 boinc_mmap_file
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user         0 Feb  8 02:28 boinc_lockfile
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user      2523 Feb  8 02:29 pandaJob.out
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user   1009510 Feb  8 02:31 agis_schedconf.cvmfs.json
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user   1513088 Feb  8 02:31 agis_ddmendpoints.agis.ALL.json
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user       416 Feb  8 02:31 workernode_map.json
[2026-02-08 03:55:52] drwx------ 5 mf493845 unix-user       440 Feb  8 02:31 pilot3
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user 188229697 Feb  8 03:54 HITS.48317952._014261.pool.root.1
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user      1021 Feb  8 03:55 memory_monitor_summary.json
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user    337847 Feb  8 03:55 log.48317952._014261.job.log.tgz.1
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user      6331 Feb  8 03:55 heartbeat.json
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user        95 Feb  8 03:55 pilot_heartbeat.json
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user      4903 Feb  8 03:55 pilotlog.txt
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user    753271 Feb  8 03:55 log.48317952._014261.job.log.1
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user       357 Feb  8 03:55 output.list
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user       620 Feb  8 03:55 runtime_log
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user   1105920 Feb  8 03:55 result.tar.gz
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user      9219 Feb  8 03:55 runtime_log.err
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user       643 Feb  8 03:55 DTpNDmPMe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNLZKDmwwb21n.diag
[2026-02-08 03:55:52] -rw------- 1 mf493845 unix-user     21663 Feb  8 03:55 stderr.txt
[2026-02-08 03:55:53] HITS file was successfully produced:
[2026-02-08 03:55:53] -rw------- 1 mf493845 unix-user 188229697 Feb  8 03:54 shared/HITS.pool.root.1
[2026-02-08 03:55:53]  *** Contents of shared directory: ***
[2026-02-08 03:55:53] total 669636
[2026-02-08 03:55:53] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  8 02:28 start_atlas.sh
[2026-02-08 03:55:53] -rw-r--r-- 2 mf493845 unix-user    597944 Feb  8 02:28 input.tar.gz
[2026-02-08 03:55:53] -rw-r--r-- 2 mf493845 unix-user 495752841 Feb  8 02:28 ATLAS.root_0
[2026-02-08 03:55:53] -rw------- 1 mf493845 unix-user 188229697 Feb  8 03:54 HITS.pool.root.1
[2026-02-08 03:55:53] -rw------- 1 mf493845 unix-user   1105920 Feb  8 03:55 result.tar.gz
03:55:54 (18909): run_atlas exited; CPU time 22286.479058
03:55:54 (18909): called boinc_finish(0)

</stderr_txt>
]]>

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