Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:34:28 (4458): wrapper (7.7.26015): starting
02:34:28 (4458): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 02:34:28] Arguments: --nthreads 8
[2026-02-08 02:34:28] Threads: 8
[2026-02-08 02:34:28] Checking for CVMFS
[2026-02-08 02:34:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 02:34:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 02:34:47] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 02:34:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 02:34:47] 2.11.0.0 7941 171582 90340 156002 1 79 2958380 4096001 208 130560 3 9430204 99.378 11362265 481 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-08 02:34:47] CVMFS is ok
[2026-02-08 02:34:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 02:34:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 02:34:47] Further information can be found at the LHC@home message board.
[2026-02-08 02:34:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 02:34:47] Checking for apptainer binary...
[2026-02-08 02:34:47] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-08 02:34:47] apptainer is not installed, using version from CVMFS
[2026-02-08 02:34:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 02:34:47] WARNING: Environment variable TMPDIR already has value [/tmp/job_11082546/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node090
[2026-02-08 02:34:47] apptainer works
[2026-02-08 02:34:47] Set ATHENA_PROC_NUMBER=8
[2026-02-08 02:34:47] Set ATHENA_CORE_NUMBER=8
[2026-02-08 02:34:47] Starting ATLAS job with PandaID=7000510551
[2026-02-08 02:34:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11082546/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 03:56:07]  *** The last 200 lines of the pilot log: ***
[2026-02-08 03:56:07]  guid=c7e2f694-737f-4ef4-9613-b5e1ed9ae50c
[2026-02-08 03:56:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 03:56:07]  is_altstaged=None
[2026-02-08 03:56:07]  is_tar=False
[2026-02-08 03:56:07]  lfn=log.48317952._010943.job.log.tgz.1
[2026-02-08 03:56:07]  mtime=0
[2026-02-08 03:56:07]  protocol_id=None
[2026-02-08 03:56:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 03:56:07]  replicas=None
[2026-02-08 03:56:07]  scope=mc23_13p6TeV
[2026-02-08 03:56:07]  status=None
[2026-02-08 03:56:07]  status_code=0
[2026-02-08 03:56:07]  storage_token=
[2026-02-08 03:56:07]  surl=/tmp/job_11082546/atlas/pilot/slots/0/PanDA_Pilot-7000510551/log.48317952._010943.job.log.tgz.1
[2026-02-08 03:56:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/81/log.48317952._010943.job.log.tgz.1
[2026-02-08 03:56:07]  workdir=None
[2026-02-08 03:56:07] ]
[2026-02-08 03:56:07] 2026-02-08 02:55:29,552 | INFO     | transferring file log.48317952._010943.job.log.tgz.1 from /tmp/job_11082546/atlas/pilot/slots/0/PanDA_Pilot-7000510551/log.48317952._010943.job.log.tgz.1 to /tmp/j
[2026-02-08 03:56:07] 2026-02-08 02:55:29,552 | INFO     | executing command: /usr/bin/env mv /tmp/job_11082546/atlas/pilot/slots/0/PanDA_Pilot-7000510551/log.48317952._010943.job.log.tgz.1 /tmp/job_11082546/atlas/pilot/sl
[2026-02-08 03:56:07] 2026-02-08 02:55:29,560 | INFO     | adding to output.list: log.48317952._010943.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/81/log.48317952._010943.job.log.tg
[2026-02-08 03:56:07] 2026-02-08 02:55:29,560 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 03:56:07] 2026-02-08 02:55:29,560 | INFO     | summary of transferred files:
[2026-02-08 03:56:07] 2026-02-08 02:55:29,560 | INFO     |  -- lfn=log.48317952._010943.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 03:56:07] 2026-02-08 02:55:29,560 | INFO     | stage-out finished correctly
[2026-02-08 03:56:07] 2026-02-08 02:55:30,383 | INFO     | time since job start (4836s) is within the limit (349056.0s)
[2026-02-08 03:56:07] 2026-02-08 02:55:30,568 | INFO     | monitor loop #374: job 0:7000510551 is in state 'finished'
[2026-02-08 03:56:07] 2026-02-08 02:55:30,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 03:56:07] 2026-02-08 02:55:31,437 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 03:56:07] 2026-02-08 02:55:32,388 | INFO     | time since job start (4838s) is within the limit (349056.0s)
[2026-02-08 03:56:07] 2026-02-08 02:55:33,071 | INFO     | monitor loop #375: job 0:7000510551 is in state 'finished'
[2026-02-08 03:56:07] 2026-02-08 02:55:33,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,309 | INFO     | job 7000510551 has state=finished
[2026-02-08 03:56:07] 2026-02-08 02:55:34,309 | INFO     | preparing for final server update for job 7000510551 in state='finished'
[2026-02-08 03:56:07] 2026-02-08 02:55:34,309 | INFO     | reading metadata from: /tmp/job_11082546/atlas/pilot/slots/0/PanDA_Pilot-7000510551/jobReport.json
[2026-02-08 03:56:07] 2026-02-08 02:55:34,310 | INFO     | added worker_node to metadata from /tmp/job_11082546/atlas/pilot/slots/0/workernode_map.json
[2026-02-08 03:56:07] 2026-02-08 02:55:34,311 | INFO     | this job has now completed (state=finished)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,311 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,311 | INFO     | log transfer has been attempted: DONE
[2026-02-08 03:56:07] 2026-02-08 02:55:34,311 | INFO     | job 7000510551 has finished - writing final server update
[2026-02-08 03:56:07] 2026-02-08 02:55:34,311 | INFO     | total number of processed events: 400 (read)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,328 | INFO     | using path: /tmp/job_11082546/atlas/pilot/slots/0/PanDA_Pilot-7000510551/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,328 | INFO     | extracted standard info from prmon json
[2026-02-08 03:56:07] 2026-02-08 02:55:34,328 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 03:56:07] 2026-02-08 02:55:34,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 03:56:07] 2026-02-08 02:55:34,328 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 03:56:07] 2026-02-08 02:55:34,328 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 03:56:07] 2026-02-08 02:55:34,329 | INFO     | fitting pss+swap vs Time
[2026-02-08 03:56:07] 2026-02-08 02:55:34,329 | INFO     | sum of square deviations: 115715658.0
[2026-02-08 03:56:07] 2026-02-08 02:55:34,329 | INFO     | sum of deviations: 66699328332.0
[2026-02-08 03:56:07] 2026-02-08 02:55:34,329 | INFO     | mean x: 1770517004.5
[2026-02-08 03:56:07] 2026-02-08 02:55:34,329 | INFO     | mean y: 1935600.5555555555
[2026-02-08 03:56:07] 2026-02-08 02:55:34,329 | INFO     | intersect: -1020536659103.1501
[2026-02-08 03:56:07] 2026-02-08 02:55:34,329 | INFO     | chi2: 9.686805809046579
[2026-02-08 03:56:07] 2026-02-08 02:55:34,329 | INFO     | current memory leak: 576.41 B/s (using 72 data points, chi2=9.69)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | could have reported an average CPU frequency of 2365 MHz (6 samples)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | ..............................
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | . Timing measurements:
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | . get job = 0 s
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | . initial setup = 2 s
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | . payload setup = 26 s
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | . stage-in = 0 s
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | . payload execution = 4792 s
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | . stage-out = 0 s
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | . log creation = 0 s
[2026-02-08 03:56:07] 2026-02-08 02:55:34,330 | INFO     | ..............................
[2026-02-08 03:56:07] 2026-02-08 02:55:34,394 | INFO     | time since job start (4840s) is within the limit (349056.0s)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | 
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | job summary report
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | --------------------------------------------------
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | PanDA job id: 7000510551
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | task id: 48317952
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | errors: (none)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | pilot state: finished 
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | transexitcode: 0
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | exeerrorcode: 0
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | exeerrordiag: 
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | exitcode: 0
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | exitmsg: OK
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | cpuconsumptiontime: 22431 s
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | nevents: 400
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | neventsw: 0
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | pid: 22414
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | pgrp: 22414
[2026-02-08 03:56:07] 2026-02-08 02:55:34,867 | INFO     | corecount: 8
[2026-02-08 03:56:07] 2026-02-08 02:55:34,868 | INFO     | event service: False
[2026-02-08 03:56:07] 2026-02-08 02:55:34,868 | INFO     | sizes: {0: 2283218, 11: 2283218, 4822: 2309490, 4824: 2318518, 4826: 2318574, 4829: 2318768}
[2026-02-08 03:56:07] 2026-02-08 02:55:34,868 | INFO     | --------------------------------------------------
[2026-02-08 03:56:07] 2026-02-08 02:55:34,868 | INFO     | 
[2026-02-08 03:56:07] 2026-02-08 02:55:34,868 | INFO     | executing command: ls -lF /tmp/job_11082546/atlas/pilot/slots/0
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,878 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,878 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 03:56:07] 2026-02-08 02:55:34,878 | INFO     | job 7000510551 has completed (purged errors)
[2026-02-08 03:56:07] 2026-02-08 02:55:34,878 | INFO     | overall cleanup function is called
[2026-02-08 03:56:07] 2026-02-08 02:55:35,884 | INFO     | --- collectZombieJob: --- 10, [22414]
[2026-02-08 03:56:07] 2026-02-08 02:55:35,884 | INFO     | zombie collector waiting for pid 22414
[2026-02-08 03:56:07] 2026-02-08 02:55:35,884 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 03:56:07] 2026-02-08 02:55:35,884 | INFO     | collected zombie processes
[2026-02-08 03:56:07] 2026-02-08 02:55:35,884 | INFO     | will attempt to kill all subprocesses of pid=22414
[2026-02-08 03:56:07] 2026-02-08 02:55:35,975 | INFO     | process IDs to be killed: [22414] (in reverse order)
[2026-02-08 03:56:07] 2026-02-08 02:55:36,008 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 03:56:07] 2026-02-08 02:55:36,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 03:56:07] 2026-02-08 02:55:36,011 | INFO     | did not find any defunct processes belonging to 22414
[2026-02-08 03:56:07] 2026-02-08 02:55:36,014 | INFO     | did not find any defunct processes belonging to 22414
[2026-02-08 03:56:07] 2026-02-08 02:55:36,014 | INFO     | ready for new job
[2026-02-08 03:56:07] 2026-02-08 02:55:36,014 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 03:56:07] 2026-02-08 02:55:36,015 | INFO     | **************************************
[2026-02-08 03:56:07] 2026-02-08 02:55:36,015 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-08 03:56:07] 2026-02-08 02:55:36,015 | INFO     | **************************************
[2026-02-08 03:56:07] 2026-02-08 02:55:36,015 | INFO     | 
[2026-02-08 03:56:07] 2026-02-08 02:55:36,028 | INFO     | architecture information:
[2026-02-08 03:56:07] 2026-02-08 02:55:36,028 | INFO     | executing command: cat /etc/os-release
[2026-02-08 03:56:07] 2026-02-08 02:55:36,034 | INFO     | cat /etc/os-release:
[2026-02-08 03:56:07] NAME="CentOS Linux"
[2026-02-08 03:56:07] VERSION="7 (Core)"
[2026-02-08 03:56:07] ID="centos"
[2026-02-08 03:56:07] ID_LIKE="rhel fedora"
[2026-02-08 03:56:07] VERSION_ID="7"
[2026-02-08 03:56:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 03:56:07] ANSI_COLOR="0;31"
[2026-02-08 03:56:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 03:56:07] HOME_URL="https://www.centos.org/"
[2026-02-08 03:56:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 03:56:07] 
[2026-02-08 03:56:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 03:56:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 03:56:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 03:56:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 03:56:07] 
[2026-02-08 03:56:07] 2026-02-08 02:55:36,034 | INFO     | **************************************
[2026-02-08 03:56:07] 2026-02-08 02:55:36,537 | INFO     | executing command: df -mP /tmp/job_11082546/atlas/pilot/slots/0
[2026-02-08 03:56:07] 2026-02-08 02:55:36,544 | INFO     | sufficient remaining disk space (226758754304 B)
[2026-02-08 03:56:07] 2026-02-08 02:55:36,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 03:56:07] 2026-02-08 02:55:36,544 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 03:56:07] 2026-02-08 02:55:36,544 | INFO     | update_server=False
[2026-02-08 03:56:07] 2026-02-08 02:55:36,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 03:56:07] 2026-02-08 02:55:36,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 03:56:07] 2026-02-08 02:55:36,579 | INFO     | aborting loop
[2026-02-08 03:56:07] 2026-02-08 02:55:36,807 | INFO     | all payload control threads have been joined
[2026-02-08 03:56:07] 2026-02-08 02:55:37,303 | INFO     | all data control threads have been joined
[2026-02-08 03:56:07] 2026-02-08 02:55:37,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 03:56:07] 2026-02-08 02:55:37,549 | INFO     | [job] retrieve thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:37,584 | INFO     | [job] job monitor thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:37,605 | INFO     | [payload] failed_post thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:37,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 03:56:07] 2026-02-08 02:55:37,626 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:37,692 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:37,733 | INFO     | [data] copytool_in thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:37,813 | INFO     | [payload] control thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:38,064 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:38,123 | INFO     | all job control threads have been joined
[2026-02-08 03:56:07] 2026-02-08 02:55:38,204 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:38,308 | INFO     | [data] control thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:38,712 | INFO     | [payload] validate_post thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:38,894 | INFO     | [job] validate thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:39,128 | INFO     | [job] control thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:39,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 03:56:07] 2026-02-08 02:55:39,627 | INFO     | [data] copytool_out thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:40,390 | INFO     | [job] queue monitor thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:55:41,494 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 03:56:07] 2026-02-08 02:56:00,672 | INFO     | [monitor] cgroup control has ended
[2026-02-08 03:56:07] 2026-02-08 02:56:01,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-02-08 03:56:07] 2026-02-08 02:56:06,101 | INFO     | all workflow threads have been joined
[2026-02-08 03:56:07] 2026-02-08 02:56:06,101 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 03:56:07] 2026-02-08 02:56:06,101 | INFO     | traces error code: 0
[2026-02-08 03:56:07] 2026-02-08 02:56:06,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 03:56:07] 2026-02-08 02:56:07,579 | INFO     | PID=17720 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-08 03:56:07] 2026-02-08 02:56:07,580 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 03:56:07] 2026-02-08 02:56:07,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 03:56:07] 2026-02-08 02:56:07,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 03:56:07] 2026-02-08 02:56:07,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 03:56:07] 2026-02-08 02:56:07,580 | INFO     | [monitor] control thread has ended
[2026-02-08 03:56:07] 2026-02-08 02:56:07,631 [wrapper] ==== pilot stdout END ====
[2026-02-08 03:56:07] 2026-02-08 02:56:07,632 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 03:56:07] 2026-02-08 02:56:07,634 [wrapper] pilotpid: 17720
[2026-02-08 03:56:07] 2026-02-08 02:56:07,635 [wrapper] Pilot exit status: 0
[2026-02-08 03:56:07] 2026-02-08 02:56:07,639 [wrapper] pandaids: 7000510551
[2026-02-08 03:56:07] 2026-02-08 02:56:07,662 [wrapper] cleanup supervisor_pilot 14137 17721
[2026-02-08 03:56:07] 2026-02-08 02:56:07,664 [wrapper] Test setup, not cleaning
[2026-02-08 03:56:07] 2026-02-08 02:56:07,665 [wrapper] apfmon messages muted
[2026-02-08 03:56:07] 2026-02-08 02:56:07,666 [wrapper] ==== wrapper stdout END ====
[2026-02-08 03:56:07] 2026-02-08 02:56:07,667 [wrapper] ==== wrapper stderr END ====
[2026-02-08 03:56:07]  *** Error codes and diagnostics ***
[2026-02-08 03:56:07]     "exeErrorCode": 0,
[2026-02-08 03:56:07]     "exeErrorDiag": "",
[2026-02-08 03:56:07]     "pilotErrorCode": 0,
[2026-02-08 03:56:07]     "pilotErrorDiag": "",
[2026-02-08 03:56:07]  *** Listing of results directory ***
[2026-02-08 03:56:07] total 673088
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user    584422 Feb  4 00:41 pilot3.tar.gz
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user      5111 Feb  4 00:42 queuedata.json
[2026-02-08 03:56:07] -rwx------ 1 mf493845 unix-user     36322 Feb  4 00:42 runpilot2-wrapper.sh
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user       100 Feb  8 00:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 03:56:07] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb  8 00:28 run_atlas
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user       105 Feb  8 00:28 job.xml
[2026-02-08 03:56:07] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  8 02:34 start_atlas.sh
[2026-02-08 03:56:07] drwxrwx--x 2 mf493845 unix-user       100 Feb  8 02:34 shared
[2026-02-08 03:56:07] -rw-r--r-- 2 mf493845 unix-user    597754 Feb  8 02:34 input.tar.gz
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user      6390 Feb  8 02:34 init_data.xml
[2026-02-08 03:56:07] -rw-r--r-- 2 mf493845 unix-user 494577356 Feb  8 02:34 EVNT.48317949._000205.pool.root.1
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user         0 Feb  8 02:34 boinc_setup_complete
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user      8192 Feb  8 02:34 boinc_mmap_file
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user         0 Feb  8 02:34 boinc_lockfile
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user      2524 Feb  8 02:34 pandaJob.out
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user   1009510 Feb  8 02:34 agis_schedconf.cvmfs.json
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user   1513088 Feb  8 02:34 agis_ddmendpoints.agis.ALL.json
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user       415 Feb  8 02:34 workernode_map.json
[2026-02-08 03:56:07] drwx------ 5 mf493845 unix-user       440 Feb  8 02:34 pilot3
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user 188582787 Feb  8 03:55 HITS.48317952._010943.pool.root.1
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user      1021 Feb  8 03:55 memory_monitor_summary.json
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user    355150 Feb  8 03:55 log.48317952._010943.job.log.tgz.1
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user      6331 Feb  8 03:55 heartbeat.json
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user       745 Feb  8 03:56 pilotlog.txt
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user        95 Feb  8 03:56 pilot_heartbeat.json
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user    733038 Feb  8 03:56 log.48317952._010943.job.log.1
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user       357 Feb  8 03:56 output.list
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user       620 Feb  8 03:56 runtime_log
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user   1105920 Feb  8 03:56 result.tar.gz
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user      9219 Feb  8 03:56 runtime_log.err
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user       643 Feb  8 03:56 kmLNDmjDf78n9Rq4apOajLDm4fhM0noT9bVooX4SDmSjVKDmk62I1n.diag
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user     21919 Feb  8 03:56 stderr.txt
[2026-02-08 03:56:07] HITS file was successfully produced:
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user 188582787 Feb  8 03:55 shared/HITS.pool.root.1
[2026-02-08 03:56:07]  *** Contents of shared directory: ***
[2026-02-08 03:56:07] total 668832
[2026-02-08 03:56:07] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  8 02:34 start_atlas.sh
[2026-02-08 03:56:07] -rw-r--r-- 2 mf493845 unix-user    597754 Feb  8 02:34 input.tar.gz
[2026-02-08 03:56:07] -rw-r--r-- 2 mf493845 unix-user 494577356 Feb  8 02:34 ATLAS.root_0
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user 188582787 Feb  8 03:55 HITS.pool.root.1
[2026-02-08 03:56:07] -rw------- 1 mf493845 unix-user   1105920 Feb  8 03:56 result.tar.gz
03:56:09 (4458): run_atlas exited; CPU time 22504.693567
03:56:09 (4458): called boinc_finish(0)

</stderr_txt>
]]>

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