Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:32:32 (4109725): wrapper (7.7.26015): starting
03:32:32 (4109725): wrapper: running run_atlas (--nthreads 4)
[2026-02-08 03:32:32] Arguments: --nthreads 4
[2026-02-08 03:32:32] Threads: 4
[2026-02-08 03:32:32] Checking for CVMFS
[2026-02-08 03:32:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 03:32:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 03:32:32] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 03:32:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 03:32:33] 2.13.1.0 2667185 2703 91996 156003 3 188 9453646 10240000 1822 130560 0 3122883 99.994 99239 314 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-08 03:32:33] CVMFS is ok
[2026-02-08 03:32:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 03:32:33] Checking for apptainer binary...
[2026-02-08 03:32:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 03:32:33] Running /usr/bin/apptainer --version
[2026-02-08 03:32:33] apptainer version 1.4.5
[2026-02-08 03:32:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 03:32:33] ellievl
[2026-02-08 03:32:33] apptainer works
[2026-02-08 03:32:33] Set ATHENA_PROC_NUMBER=4
[2026-02-08 03:32:33] Set ATHENA_CORE_NUMBER=4
[2026-02-08 03:32:33] Starting ATLAS job with PandaID=7000877851
[2026-02-08 03:32:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 05:34:15]  *** The last 200 lines of the pilot log: ***
[2026-02-08 05:34:15] 2026-02-08 04:33:19,049 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,049 | INFO     | log transfer has been attempted: DONE
[2026-02-08 05:34:15] 2026-02-08 04:33:19,049 | INFO     | job 7000877851 has finished - writing final server update
[2026-02-08 05:34:15] 2026-02-08 04:33:19,049 | INFO     | total number of processed events: 400 (read)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,051 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000877851/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,052 | INFO     | extracted standard info from prmon json
[2026-02-08 05:34:15] 2026-02-08 04:33:19,052 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 05:34:15] 2026-02-08 04:33:19,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 05:34:15] 2026-02-08 04:33:19,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 05:34:15] 2026-02-08 04:33:19,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 05:34:15] 2026-02-08 04:33:19,053 | INFO     | fitting pss+swap vs Time
[2026-02-08 05:34:15] 2026-02-08 04:33:19,054 | INFO     | sum of square deviations: 509440249.5
[2026-02-08 05:34:15] 2026-02-08 04:33:19,054 | INFO     | sum of deviations: 7546498185.000008
[2026-02-08 05:34:15] 2026-02-08 04:33:19,054 | INFO     | mean x: 1770521578.5
[2026-02-08 05:34:15] 2026-02-08 04:33:19,054 | INFO     | mean y: 2353212.881355932
[2026-02-08 05:34:15] 2026-02-08 04:33:19,054 | INFO     | intersect: -26224938195.22243
[2026-02-08 05:34:15] 2026-02-08 04:33:19,054 | INFO     | chi2: 1.848032098740734
[2026-02-08 05:34:15] 2026-02-08 04:33:19,054 | INFO     | sum of square deviations: 447383272.0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,055 | INFO     | sum of deviations: 7323316325.999997
[2026-02-08 05:34:15] 2026-02-08 04:33:19,055 | INFO     | mean x: 1770521426.0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,055 | INFO     | mean y: 2352664.1858407077
[2026-02-08 05:34:15] 2026-02-08 04:33:19,055 | INFO     | intersect: -28979706514.27758
[2026-02-08 05:34:15] 2026-02-08 04:33:19,055 | INFO     | chi2: 1.851561167542602
[2026-02-08 05:34:15] 2026-02-08 04:33:19,055 | INFO     | current chi2=1.851561167542602 (change=-0.19096360957544167 %)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,055 | INFO     | right removable region: 112
[2026-02-08 05:34:15] 2026-02-08 04:33:19,055 | INFO     | sum of square deviations: 447383272.0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,055 | INFO     | sum of deviations: -12077906365.0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,055 | INFO     | mean x: 1770521731.0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | mean y: 2400629.6991150444
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | intersect: 47800780726.96774
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | chi2: 0.06129201907865531
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | current chi2=0.06129201907865531 (change=96.68338990862658 %)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | sum of square deviations: 390582207.0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | sum of deviations: -10164352804.499996
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | mean x: 1770521883.5
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | mean y: 2395474.9166666665
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | intersect: 46077738256.67795
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | chi2: 0.06062648794473064
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | current chi2=0.06062648794473064 (change=1.085836531295533 %)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,056 | INFO     | left removable region: 20
[2026-02-08 05:34:15] 2026-02-08 04:33:19,057 | INFO     | sum of square deviations: 241429643.0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,057 | INFO     | sum of deviations: -4872611283.5
[2026-02-08 05:34:15] 2026-02-08 04:33:19,057 | INFO     | mean x: 1770522005.5
[2026-02-08 05:34:15] 2026-02-08 04:33:19,057 | INFO     | mean y: 2380771.663043478
[2026-02-08 05:34:15] 2026-02-08 04:33:19,057 | INFO     | intersect: 35735629574.43888
[2026-02-08 05:34:15] 2026-02-08 04:33:19,057 | INFO     | chi2: 0.04522986690567268
[2026-02-08 05:34:15] 2026-02-08 04:33:19,057 | INFO     | current memory leak: -20.18 B/s (using 92 data points, chi2=0.05)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,057 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,058 | INFO     | ..............................
[2026-02-08 05:34:15] 2026-02-08 04:33:19,058 | INFO     | . Timing measurements:
[2026-02-08 05:34:15] 2026-02-08 04:33:19,058 | INFO     | . get job = 0 s
[2026-02-08 05:34:15] 2026-02-08 04:33:19,058 | INFO     | . initial setup = 9 s
[2026-02-08 05:34:15] 2026-02-08 04:33:19,058 | INFO     | . payload setup = 10 s
[2026-02-08 05:34:15] 2026-02-08 04:33:19,058 | INFO     | . stage-in = 0 s
[2026-02-08 05:34:15] 2026-02-08 04:33:19,058 | INFO     | . payload execution = 7191 s
[2026-02-08 05:34:15] 2026-02-08 04:33:19,058 | INFO     | . stage-out = 0 s
[2026-02-08 05:34:15] 2026-02-08 04:33:19,058 | INFO     | . log creation = 0 s
[2026-02-08 05:34:15] 2026-02-08 04:33:19,058 | INFO     | ..............................
[2026-02-08 05:34:15] 2026-02-08 04:33:19,378 | WARNING  | process 4118399 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 05:34:15] 2026-02-08 04:33:19,378 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000877851/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,507 | INFO     | 
[2026-02-08 05:34:15] 2026-02-08 04:33:19,507 | INFO     | job summary report
[2026-02-08 05:34:15] 2026-02-08 04:33:19,507 | INFO     | --------------------------------------------------
[2026-02-08 05:34:15] 2026-02-08 04:33:19,507 | INFO     | PanDA job id: 7000877851
[2026-02-08 05:34:15] 2026-02-08 04:33:19,508 | INFO     | task id: 48431113
[2026-02-08 05:34:15] 2026-02-08 04:33:19,508 | INFO     | errors: (none)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,508 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 05:34:15] 2026-02-08 04:33:19,508 | INFO     | pilot state: finished 
[2026-02-08 05:34:15] 2026-02-08 04:33:19,508 | INFO     | transexitcode: 0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,508 | INFO     | exeerrorcode: 0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,508 | INFO     | exeerrordiag: 
[2026-02-08 05:34:15] 2026-02-08 04:33:19,509 | INFO     | exitcode: 0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,509 | INFO     | exitmsg: OK
[2026-02-08 05:34:15] 2026-02-08 04:33:19,509 | INFO     | cpuconsumptiontime: 27640 s
[2026-02-08 05:34:15] 2026-02-08 04:33:19,509 | INFO     | nevents: 400
[2026-02-08 05:34:15] 2026-02-08 04:33:19,509 | INFO     | neventsw: 0
[2026-02-08 05:34:15] 2026-02-08 04:33:19,509 | INFO     | pid: 4118399
[2026-02-08 05:34:15] 2026-02-08 04:33:19,509 | INFO     | pgrp: 4118399
[2026-02-08 05:34:15] 2026-02-08 04:33:19,510 | INFO     | corecount: 4
[2026-02-08 05:34:15] 2026-02-08 04:33:19,510 | INFO     | event service: False
[2026-02-08 05:34:15] 2026-02-08 04:33:19,510 | INFO     | sizes: {0: 2282700, 1: 2283161, 11: 2283161, 7205: 2319422, 7208: 2319616}
[2026-02-08 05:34:15] 2026-02-08 04:33:19,510 | INFO     | --------------------------------------------------
[2026-02-08 05:34:15] 2026-02-08 04:33:19,510 | INFO     | 
[2026-02-08 05:34:15] 2026-02-08 04:33:19,510 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-02-08 05:34:15] 2026-02-08 04:33:19,543 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,544 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,544 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,544 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,546 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,546 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 05:34:15] 2026-02-08 04:33:19,547 | INFO     | job 7000877851 has completed (purged errors)
[2026-02-08 05:34:15] 2026-02-08 04:33:19,547 | INFO     | overall cleanup function is called
[2026-02-08 05:34:15] 2026-02-08 04:33:19,620 | INFO     | number of running child processes to parent process 4118399: 1
[2026-02-08 05:34:15] 2026-02-08 04:33:19,620 | INFO     | maximum number of monitored processes: 6
[2026-02-08 05:34:15] 2026-02-08 04:33:19,620 | INFO     | aborting job monitoring since job object (job id=7000877851) has expired
[2026-02-08 05:34:15] 2026-02-08 04:33:20,558 | INFO     | --- collectZombieJob: --- 10, [4118399]
[2026-02-08 05:34:15] 2026-02-08 04:33:20,558 | INFO     | zombie collector waiting for pid 4118399
[2026-02-08 05:34:15] 2026-02-08 04:33:20,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 05:34:15] 2026-02-08 04:33:20,558 | INFO     | collected zombie processes
[2026-02-08 05:34:15] 2026-02-08 04:33:20,558 | INFO     | will attempt to kill all subprocesses of pid=4118399
[2026-02-08 05:34:15] 2026-02-08 04:33:20,789 | INFO     | process IDs to be killed: [4118399] (in reverse order)
[2026-02-08 05:34:15] 2026-02-08 04:33:20,881 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 05:34:15] 2026-02-08 04:33:20,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 05:34:15] 2026-02-08 04:33:20,888 | INFO     | did not find any defunct processes belonging to 4118399
[2026-02-08 05:34:15] 2026-02-08 04:33:20,893 | INFO     | did not find any defunct processes belonging to 4118399
[2026-02-08 05:34:15] 2026-02-08 04:33:20,893 | INFO     | ready for new job
[2026-02-08 05:34:15] 2026-02-08 04:33:20,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 05:34:15] 2026-02-08 04:33:20,897 | INFO     | **************************************
[2026-02-08 05:34:15] 2026-02-08 04:33:20,897 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 05:34:15] 2026-02-08 04:33:20,897 | INFO     | **************************************
[2026-02-08 05:34:15] 2026-02-08 04:33:20,897 | INFO     | 
[2026-02-08 05:34:15] 2026-02-08 04:33:20,898 | INFO     | pilot is running in a VM
[2026-02-08 05:34:15] 2026-02-08 04:33:20,898 | INFO     | architecture information:
[2026-02-08 05:34:15] 2026-02-08 04:33:20,898 | INFO     | executing command: cat /etc/os-release
[2026-02-08 05:34:15] 2026-02-08 04:33:20,918 | INFO     | cat /etc/os-release:
[2026-02-08 05:34:15] NAME="CentOS Linux"
[2026-02-08 05:34:15] VERSION="7 (Core)"
[2026-02-08 05:34:15] ID="centos"
[2026-02-08 05:34:15] ID_LIKE="rhel fedora"
[2026-02-08 05:34:15] VERSION_ID="7"
[2026-02-08 05:34:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 05:34:15] ANSI_COLOR="0;31"
[2026-02-08 05:34:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 05:34:15] HOME_URL="https://www.centos.org/"
[2026-02-08 05:34:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 05:34:15] 
[2026-02-08 05:34:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 05:34:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 05:34:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 05:34:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 05:34:15] 
[2026-02-08 05:34:15] 2026-02-08 04:33:20,918 | INFO     | **************************************
[2026-02-08 05:34:15] 2026-02-08 04:33:21,422 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-02-08 05:34:15] 2026-02-08 04:33:21,442 | INFO     | sufficient remaining disk space (51406438400 B)
[2026-02-08 05:34:15] 2026-02-08 04:33:21,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 05:34:15] 2026-02-08 04:33:21,443 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 05:34:15] 2026-02-08 04:33:21,443 | INFO     | update_server=False
[2026-02-08 05:34:15] 2026-02-08 04:33:21,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 05:34:15] 2026-02-08 04:33:21,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 05:34:15] 2026-02-08 04:33:21,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 05:34:15] 2026-02-08 04:33:21,445 | INFO     | aborting loop
[2026-02-08 05:34:15] 2026-02-08 04:33:21,660 | INFO     | all data control threads have been joined
[2026-02-08 05:34:15] 2026-02-08 04:33:21,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 05:34:15] 2026-02-08 04:33:22,002 | INFO     | all payload control threads have been joined
[2026-02-08 05:34:15] 2026-02-08 04:33:22,372 | INFO     | all job control threads have been joined
[2026-02-08 05:34:15] 2026-02-08 04:33:22,449 | INFO     | [job] retrieve thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:22,450 | INFO     | [job] job monitor thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:22,491 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:22,666 | INFO     | [data] control thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:22,930 | INFO     | [payload] validate_post thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:23,008 | INFO     | [payload] control thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:23,249 | INFO     | [payload] failed_post thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:23,377 | INFO     | [job] control thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:23,510 | INFO     | [job] validate thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:23,657 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:23,723 | INFO     | [data] copytool_out thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:23,739 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:23,839 | INFO     | [data] copytool_in thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:24,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 05:34:15] 2026-02-08 04:33:25,113 | INFO     | [job] queue monitor thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:25,452 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:32,362 | INFO     | job.realtimelogging is not enabled
[2026-02-08 05:34:15] 2026-02-08 04:33:33,368 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 05:34:15] 2026-02-08 04:33:51,439 | INFO     | PID=4113840 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 05:34:15] 2026-02-08 04:33:51,440 | INFO     | .. there are 3 such processes running
[2026-02-08 05:34:15] 2026-02-08 04:33:51,440 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 05:34:15] 2026-02-08 04:33:51,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 05:34:15] 2026-02-08 04:33:51,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 05:34:15] 2026-02-08 04:34:09,210 | INFO     | [monitor] cgroup control has ended
[2026-02-08 05:34:15] 2026-02-08 04:34:09,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131925330032448)>', '<ExcThread(monitor, started 131924509042432)>']
[2026-02-08 05:34:15] 2026-02-08 04:34:10,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 05:34:15] 2026-02-08 04:34:10,538 | INFO     | [monitor] control thread has ended
[2026-02-08 05:34:15] 2026-02-08 04:34:14,837 | INFO     | all workflow threads have been joined
[2026-02-08 05:34:15] 2026-02-08 04:34:14,837 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 05:34:15] 2026-02-08 04:34:14,837 | INFO     | traces error code: 0
[2026-02-08 05:34:15] 2026-02-08 04:34:14,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 05:34:15] 2026-02-08 04:34:14,933 [wrapper] ==== pilot stdout END ====
[2026-02-08 05:34:15] 2026-02-08 04:34:14,940 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 05:34:15] 2026-02-08 04:34:14,946 [wrapper] pilotpid: 4113840
[2026-02-08 05:34:15] 2026-02-08 04:34:14,952 [wrapper] Pilot exit status: 0
[2026-02-08 05:34:15] 2026-02-08 04:34:14,977 [wrapper] pandaids: 7000877851
[2026-02-08 05:34:15] 2026-02-08 04:34:15,053 [wrapper] cleanup supervisor_pilot 4168520 4113841
[2026-02-08 05:34:15] 2026-02-08 04:34:15,060 [wrapper] Test setup, not cleaning
[2026-02-08 05:34:15] 2026-02-08 04:34:15,066 [wrapper] apfmon messages muted
[2026-02-08 05:34:15] 2026-02-08 04:34:15,073 [wrapper] ==== wrapper stdout END ====
[2026-02-08 05:34:15] 2026-02-08 04:34:15,079 [wrapper] ==== wrapper stderr END ====
[2026-02-08 05:34:15]  *** Error codes and diagnostics ***
[2026-02-08 05:34:15]     "exeErrorCode": 0,
[2026-02-08 05:34:15]     "exeErrorDiag": "",
[2026-02-08 05:34:15]     "pilotErrorCode": 0,
[2026-02-08 05:34:15]     "pilotErrorDiag": "",
[2026-02-08 05:34:15]  *** Listing of results directory ***
[2026-02-08 05:34:15] insgesamt 889112
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc    602657 Feb  3 12:11 pilot3.tar.gz
[2026-02-08 05:34:15] -rwx------ 1 yeti boinc     36322 Feb  7 21:45 runpilot2-wrapper.sh
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc      5111 Feb  7 21:47 queuedata.json
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc       100 Feb  8 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 05:34:15] -rwxr-xr-x 1 yeti boinc      7986 Feb  8 03:32 run_atlas
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc       105 Feb  8 03:32 job.xml
[2026-02-08 05:34:15] -rw-r--r-- 2 yeti boinc 649960254 Feb  8 03:32 EVNT.48431111._000129.pool.root.1
[2026-02-08 05:34:15] -rw-r--r-- 2 yeti boinc    616307 Feb  8 03:32 input.tar.gz
[2026-02-08 05:34:15] -rw-r--r-- 2 yeti boinc     15845 Feb  8 03:32 start_atlas.sh
[2026-02-08 05:34:15] drwxrwx--x 2 yeti boinc      4096 Feb  8 03:32 shared
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc      6558 Feb  8 03:32 init_data.xml
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc         0 Feb  8 03:32 boinc_setup_complete
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc         0 Feb  8 03:32 boinc_lockfile
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc      2545 Feb  8 03:32 pandaJob.out
[2026-02-08 05:34:15] -rw------- 1 yeti boinc        52 Feb  8 03:32 setup.sh.local
[2026-02-08 05:34:15] -rw------- 1 yeti boinc   1009518 Feb  8 03:32 agis_schedconf.cvmfs.json
[2026-02-08 05:34:15] -rw------- 1 yeti boinc   1513088 Feb  8 03:32 agis_ddmendpoints.agis.ALL.json
[2026-02-08 05:34:15] -rw------- 1 yeti boinc       419 Feb  8 03:32 workernode_map.json
[2026-02-08 05:34:15] drwx------ 7 yeti boinc      4096 Feb  8 03:32 pilot3
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc       530 Feb  8 05:32 boinc_task_state.xml
[2026-02-08 05:34:15] -rw------- 1 yeti boinc 253727072 Feb  8 05:32 HITS.48431113._006523.pool.root.1
[2026-02-08 05:34:15] -rw------- 1 yeti boinc        95 Feb  8 05:32 pilot_heartbeat.json
[2026-02-08 05:34:15] -rw------- 1 yeti boinc      1015 Feb  8 05:33 memory_monitor_summary.json
[2026-02-08 05:34:15] -rw------- 1 yeti boinc    337850 Feb  8 05:33 log.48431113._006523.job.log.tgz.1
[2026-02-08 05:34:15] -rw------- 1 yeti boinc      6270 Feb  8 05:33 heartbeat.json
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc      8192 Feb  8 05:34 boinc_mmap_file
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc        27 Feb  8 05:34 wrapper_checkpoint.txt
[2026-02-08 05:34:15] -rw------- 1 yeti boinc      4967 Feb  8 05:34 pilotlog.txt
[2026-02-08 05:34:15] -rw------- 1 yeti boinc   1050326 Feb  8 05:34 log.48431113._006523.job.log.1
[2026-02-08 05:34:15] -rw------- 1 yeti boinc       357 Feb  8 05:34 output.list
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc       620 Feb  8 05:34 runtime_log
[2026-02-08 05:34:15] -rw------- 1 yeti boinc   1402880 Feb  8 05:34 result.tar.gz
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc      9536 Feb  8 05:34 runtime_log.err
[2026-02-08 05:34:15] -rw------- 1 yeti boinc       637 Feb  8 05:34 9mYLDm9L488nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJ7bKDmBgrTOn.diag
[2026-02-08 05:34:15] -rw-r--r-- 1 yeti boinc     20951 Feb  8 05:34 stderr.txt
[2026-02-08 05:34:15] HITS file was successfully produced:
[2026-02-08 05:34:15] -rw------- 1 yeti boinc 253727072 Feb  8 05:32 shared/HITS.pool.root.1
[2026-02-08 05:34:15]  *** Contents of shared directory: ***
[2026-02-08 05:34:15] insgesamt 884512
[2026-02-08 05:34:15] -rw-r--r-- 2 yeti boinc 649960254 Feb  8 03:32 ATLAS.root_0
[2026-02-08 05:34:15] -rw-r--r-- 2 yeti boinc    616307 Feb  8 03:32 input.tar.gz
[2026-02-08 05:34:15] -rw-r--r-- 2 yeti boinc     15845 Feb  8 03:32 start_atlas.sh
[2026-02-08 05:34:15] -rw------- 1 yeti boinc 253727072 Feb  8 05:32 HITS.pool.root.1
[2026-02-08 05:34:15] -rw------- 1 yeti boinc   1402880 Feb  8 05:34 result.tar.gz
05:34:16 (4109725): run_atlas exited; CPU time 27948.220617
05:34:16 (4109725): called boinc_finish(0)

</stderr_txt>
]]>

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