Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:38:12 (837655): wrapper (7.7.26015): starting
14:38:12 (837655): wrapper: running run_atlas (--nthreads 3)
[2026-02-08 14:38:12] Arguments: --nthreads 3
[2026-02-08 14:38:12] Threads: 3
[2026-02-08 14:38:12] Checking for CVMFS
[2026-02-08 14:38:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 14:38:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 14:38:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 14:38:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 14:38:13] 2.9.2.0 4046500 3337 82516 156021 1 50 27462948 36864001 0 130560 0 1365783 99.983 123649 19825 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-08 14:38:13] CVMFS is ok
[2026-02-08 14:38:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 14:38:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 14:38:13] Further information can be found at the LHC@home message board.
[2026-02-08 14:38:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 14:38:13] Checking for apptainer binary...
[2026-02-08 14:38:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 14:38:13] Running /usr/bin/apptainer --version
[2026-02-08 14:38:13] apptainer version 1.4.1-1.1
[2026-02-08 14:38:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 14:38:13] legendA163
[2026-02-08 14:38:13] apptainer works
[2026-02-08 14:38:13] Set ATHENA_PROC_NUMBER=3
[2026-02-08 14:38:13] Set ATHENA_CORE_NUMBER=3
[2026-02-08 14:38:13] Starting ATLAS job with PandaID=7000877266
[2026-02-08 14:38:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 16:12:35]  *** The last 200 lines of the pilot log: ***
[2026-02-08 16:12:35]  scope=mc23_13p6TeV
[2026-02-08 16:12:35]  status=None
[2026-02-08 16:12:35]  status_code=0
[2026-02-08 16:12:35]  storage_token=
[2026-02-08 16:12:35]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7000877266/log.48318042._012463.job.log.tgz.1
[2026-02-08 16:12:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/1c/log.48318042._012463.job.log.tgz.1
[2026-02-08 16:12:35]  workdir=None
[2026-02-08 16:12:35] ]
[2026-02-08 16:12:35] 2026-02-08 15:11:39,516 | INFO     | transferring file log.48318042._012463.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7000877266/log.48318042._012463.job.log.tgz.1 to /local/data/boinc/
[2026-02-08 16:12:35] 2026-02-08 15:11:39,516 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7000877266/log.48318042._012463.job.log.tgz.1 /local/data/boinc/slots/0/log.48318042._0124
[2026-02-08 16:12:35] 2026-02-08 15:11:39,529 | INFO     | adding to output.list: log.48318042._012463.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/1c/log.48318042._012463.job.log.tg
[2026-02-08 16:12:35] 2026-02-08 15:11:39,529 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 16:12:35] 2026-02-08 15:11:39,529 | INFO     | summary of transferred files:
[2026-02-08 16:12:35] 2026-02-08 15:11:39,529 | INFO     |  -- lfn=log.48318042._012463.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 16:12:35] 2026-02-08 15:11:39,530 | INFO     | stage-out finished correctly
[2026-02-08 16:12:35] 2026-02-08 15:11:39,559 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 16:12:35] 2026-02-08 15:11:41,349 | INFO     | time since job start (5597s) is within the limit (349056.0s)
[2026-02-08 16:12:35] 2026-02-08 15:11:41,856 | INFO     | job 7000877266 has state=finished
[2026-02-08 16:12:35] 2026-02-08 15:11:41,856 | INFO     | preparing for final server update for job 7000877266 in state='finished'
[2026-02-08 16:12:35] 2026-02-08 15:11:41,856 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7000877266/jobReport.json
[2026-02-08 16:12:35] 2026-02-08 15:11:41,858 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-08 16:12:35] 2026-02-08 15:11:41,858 | INFO     | this job has now completed (state=finished)
[2026-02-08 16:12:35] 2026-02-08 15:11:41,858 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 16:12:35] 2026-02-08 15:11:41,858 | INFO     | log transfer has been attempted: DONE
[2026-02-08 16:12:35] 2026-02-08 15:11:41,858 | INFO     | job 7000877266 has finished - writing final server update
[2026-02-08 16:12:35] 2026-02-08 15:11:41,858 | INFO     | total number of processed events: 400 (read)
[2026-02-08 16:12:35] 2026-02-08 15:11:41,859 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7000877266/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 16:12:35] 2026-02-08 15:11:41,860 | INFO     | extracted standard info from prmon json
[2026-02-08 16:12:35] 2026-02-08 15:11:41,860 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 16:12:35] 2026-02-08 15:11:41,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 16:12:35] 2026-02-08 15:11:41,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 16:12:35] 2026-02-08 15:11:41,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 16:12:35] 2026-02-08 15:11:41,861 | INFO     | fitting pss+swap vs Time
[2026-02-08 16:12:35] 2026-02-08 15:11:41,861 | INFO     | sum of square deviations: 190403570.0
[2026-02-08 16:12:35] 2026-02-08 15:11:41,861 | INFO     | sum of deviations: -17763403740.000004
[2026-02-08 16:12:35] 2026-02-08 15:11:41,861 | INFO     | mean x: 1770560788.0
[2026-02-08 16:12:35] 2026-02-08 15:11:41,861 | INFO     | mean y: 2477179.0470588235
[2026-02-08 16:12:35] 2026-02-08 15:11:41,861 | INFO     | intersect: 165184181090.67303
[2026-02-08 16:12:35] 2026-02-08 15:11:41,861 | INFO     | chi2: 0.10694532658457602
[2026-02-08 16:12:35] 2026-02-08 15:11:41,861 | INFO     | current memory leak: -93.29 B/s (using 85 data points, chi2=0.11)
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | could have reported an average CPU frequency of 3788 MHz (7 samples)
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | ..............................
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | . Timing measurements:
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | . get job = 0 s
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | . initial setup = 3 s
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | . payload setup = 3 s
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | . stage-in = 0 s
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | . payload execution = 5577 s
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | . stage-out = 0 s
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | . log creation = 0 s
[2026-02-08 16:12:35] 2026-02-08 15:11:41,862 | INFO     | ..............................
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | 
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | job summary report
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | --------------------------------------------------
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | PanDA job id: 7000877266
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | task id: 48318042
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | errors: (none)
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | pilot state: finished 
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | transexitcode: 0
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | exeerrorcode: 0
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | exeerrordiag: 
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | exitcode: 0
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | exitmsg: OK
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | cpuconsumptiontime: 16057 s
[2026-02-08 16:12:35] 2026-02-08 15:11:41,891 | INFO     | nevents: 400
[2026-02-08 16:12:35] 2026-02-08 15:11:41,892 | INFO     | neventsw: 0
[2026-02-08 16:12:35] 2026-02-08 15:11:41,892 | INFO     | pid: 846155
[2026-02-08 16:12:35] 2026-02-08 15:11:41,892 | INFO     | pgrp: 846155
[2026-02-08 16:12:35] 2026-02-08 15:11:41,892 | INFO     | corecount: 3
[2026-02-08 16:12:35] 2026-02-08 15:11:41,892 | INFO     | event service: False
[2026-02-08 16:12:35] 2026-02-08 15:11:41,892 | INFO     | sizes: {0: 2283109, 10: 2283109, 5584: 2309833, 5585: 2318893, 5587: 2319031}
[2026-02-08 16:12:35] 2026-02-08 15:11:41,892 | INFO     | --------------------------------------------------
[2026-02-08 16:12:35] 2026-02-08 15:11:41,892 | INFO     | 
[2026-02-08 16:12:35] 2026-02-08 15:11:41,892 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-08 16:12:35] 2026-02-08 15:11:41,904 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,904 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,904 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,904 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | job 7000877266 has completed (purged errors)
[2026-02-08 16:12:35] 2026-02-08 15:11:41,905 | INFO     | overall cleanup function is called
[2026-02-08 16:12:35] 2026-02-08 15:11:42,426 | INFO     | PID=841713 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-08 16:12:35] 2026-02-08 15:11:42,912 | INFO     | --- collectZombieJob: --- 10, [846155]
[2026-02-08 16:12:35] 2026-02-08 15:11:42,912 | INFO     | zombie collector waiting for pid 846155
[2026-02-08 16:12:35] 2026-02-08 15:11:42,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 16:12:35] 2026-02-08 15:11:42,912 | INFO     | collected zombie processes
[2026-02-08 16:12:35] 2026-02-08 15:11:42,912 | INFO     | will attempt to kill all subprocesses of pid=846155
[2026-02-08 16:12:35] 2026-02-08 15:11:42,966 | INFO     | process IDs to be killed: [846155] (in reverse order)
[2026-02-08 16:12:35] 2026-02-08 15:11:42,994 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 16:12:35] 2026-02-08 15:11:42,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 16:12:35] 2026-02-08 15:11:42,996 | INFO     | did not find any defunct processes belonging to 846155
[2026-02-08 16:12:35] 2026-02-08 15:11:42,998 | INFO     | did not find any defunct processes belonging to 846155
[2026-02-08 16:12:35] 2026-02-08 15:11:42,998 | INFO     | ready for new job
[2026-02-08 16:12:35] 2026-02-08 15:11:42,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 16:12:35] 2026-02-08 15:11:42,998 | INFO     | **************************************
[2026-02-08 16:12:35] 2026-02-08 15:11:42,999 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 16:12:35] 2026-02-08 15:11:42,999 | INFO     | **************************************
[2026-02-08 16:12:35] 2026-02-08 15:11:42,999 | INFO     | 
[2026-02-08 16:12:35] 2026-02-08 15:11:42,999 | INFO     | architecture information:
[2026-02-08 16:12:35] 2026-02-08 15:11:42,999 | INFO     | executing command: cat /etc/os-release
[2026-02-08 16:12:35] 2026-02-08 15:11:43,008 | INFO     | cat /etc/os-release:
[2026-02-08 16:12:35] NAME="CentOS Linux"
[2026-02-08 16:12:35] VERSION="7 (Core)"
[2026-02-08 16:12:35] ID="centos"
[2026-02-08 16:12:35] ID_LIKE="rhel fedora"
[2026-02-08 16:12:35] VERSION_ID="7"
[2026-02-08 16:12:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 16:12:35] ANSI_COLOR="0;31"
[2026-02-08 16:12:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 16:12:35] HOME_URL="https://www.centos.org/"
[2026-02-08 16:12:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 16:12:35] 
[2026-02-08 16:12:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 16:12:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 16:12:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 16:12:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 16:12:35] 
[2026-02-08 16:12:35] 2026-02-08 15:11:43,008 | INFO     | **************************************
[2026-02-08 16:12:35] 2026-02-08 15:11:43,511 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-08 16:12:35] 2026-02-08 15:11:43,524 | INFO     | sufficient remaining disk space (374085779456 B)
[2026-02-08 16:12:35] 2026-02-08 15:11:43,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 16:12:35] 2026-02-08 15:11:43,525 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 16:12:35] 2026-02-08 15:11:43,525 | INFO     | update_server=False
[2026-02-08 16:12:35] 2026-02-08 15:11:43,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 16:12:35] 2026-02-08 15:11:43,525 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 16:12:35] 2026-02-08 15:11:43,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 16:12:35] 2026-02-08 15:11:43,788 | INFO     | all payload control threads have been joined
[2026-02-08 16:12:35] 2026-02-08 15:11:44,090 | INFO     | all job control threads have been joined
[2026-02-08 16:12:35] 2026-02-08 15:11:44,380 | INFO     | all data control threads have been joined
[2026-02-08 16:12:35] 2026-02-08 15:11:44,531 | INFO     | [job] retrieve thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:44,531 | INFO     | [job] queue monitor thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:44,544 | INFO     | [payload] failed_post thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:44,794 | INFO     | [payload] control thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:45,047 | WARNING  | process 846155 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 16:12:35] 2026-02-08 15:11:45,070 | INFO     | [payload] validate_post thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:45,086 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 16:12:35] 2026-02-08 15:11:45,087 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 16:12:35] 2026-02-08 15:11:45,087 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-08 16:12:35] 2026-02-08 15:11:45,087 | WARNING  | maxPSS not found in memory monitor output
[2026-02-08 16:12:35] 2026-02-08 15:11:45,087 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7000877266/payload.stdout) since it has not been created yet
[2026-02-08 16:12:35] 2026-02-08 15:11:45,087 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-08 16:12:35] 2026-02-08 15:11:45,096 | INFO     | [job] control thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:45,097 | INFO     | sufficient remaining disk space (374085779456 B)
[2026-02-08 16:12:35] 2026-02-08 15:11:45,097 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-08 16:12:35] 2026-02-08 15:11:45,097 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7000877266/HITS.48318042._012463.pool.root.1 since it does not exist
[2026-02-08 16:12:35] 2026-02-08 15:11:45,148 | INFO     | number of running child processes to parent process 846155: 1
[2026-02-08 16:12:35] 2026-02-08 15:11:45,148 | INFO     | maximum number of monitored processes: 6
[2026-02-08 16:12:35] 2026-02-08 15:11:45,148 | INFO     | aborting job monitoring since job object (job id=7000877266) has expired
[2026-02-08 16:12:35] 2026-02-08 15:11:45,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 16:12:35] 2026-02-08 15:11:45,148 | INFO     | will abort loop
[2026-02-08 16:12:35] 2026-02-08 15:11:45,386 | INFO     | [data] control thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:45,531 | INFO     | [data] copytool_out thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:45,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 16:12:35] 2026-02-08 15:11:45,633 | INFO     | [job] validate thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:45,679 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:45,731 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:45,867 | INFO     | [data] copytool_in thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:45,952 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:46,153 | INFO     | [job] job monitor thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:49,601 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:11:53,784 | INFO     | job.realtimelogging is not enabled
[2026-02-08 16:12:35] 2026-02-08 15:11:54,789 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 16:12:35] 2026-02-08 15:12:14,566 | INFO     | PID=841713 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-08 16:12:35] 2026-02-08 15:12:14,566 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 16:12:35] 2026-02-08 15:12:14,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 16:12:35] 2026-02-08 15:12:14,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 16:12:35] 2026-02-08 15:12:29,960 | INFO     | [monitor] cgroup control has ended
[2026-02-08 16:12:35] 2026-02-08 15:12:29,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371541153600)>', '<ExcThread(monitor, started 140371040384768)>']
[2026-02-08 16:12:35] 2026-02-08 15:12:30,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 16:12:35] 2026-02-08 15:12:30,647 | INFO     | [monitor] control thread has ended
[2026-02-08 16:12:35] 2026-02-08 15:12:35,017 | INFO     | all workflow threads have been joined
[2026-02-08 16:12:35] 2026-02-08 15:12:35,017 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 16:12:35] 2026-02-08 15:12:35,018 | INFO     | traces error code: 0
[2026-02-08 16:12:35] 2026-02-08 15:12:35,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 16:12:35] 2026-02-08 15:12:35,070 [wrapper] ==== pilot stdout END ====
[2026-02-08 16:12:35] 2026-02-08 15:12:35,073 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 16:12:35] 2026-02-08 15:12:35,075 [wrapper] pilotpid: 841713
[2026-02-08 16:12:35] 2026-02-08 15:12:35,078 [wrapper] Pilot exit status: 0
[2026-02-08 16:12:35] 2026-02-08 15:12:35,085 [wrapper] pandaids: 7000877266
[2026-02-08 16:12:35] 2026-02-08 15:12:35,106 [wrapper] cleanup supervisor_pilot  856509 841714
[2026-02-08 16:12:35] 2026-02-08 15:12:35,109 [wrapper] Test setup, not cleaning
[2026-02-08 16:12:35] 2026-02-08 15:12:35,111 [wrapper] apfmon messages muted
[2026-02-08 16:12:35] 2026-02-08 15:12:35,114 [wrapper] ==== wrapper stdout END ====
[2026-02-08 16:12:35] 2026-02-08 15:12:35,116 [wrapper] ==== wrapper stderr END ====
[2026-02-08 16:12:35]  *** Error codes and diagnostics ***
[2026-02-08 16:12:35]     "exeErrorCode": 0,
[2026-02-08 16:12:35]     "exeErrorDiag": "",
[2026-02-08 16:12:35]     "pilotErrorCode": 0,
[2026-02-08 16:12:35]     "pilotErrorDiag": "",
[2026-02-08 16:12:35]  *** Listing of results directory ***
[2026-02-08 16:12:35] total 682028
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc    584627 Feb  7 21:44 pilot3.tar.gz
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc      5111 Feb  7 21:44 queuedata.json
[2026-02-08 16:12:35] -rwx------ 1 boinc boinc     36322 Feb  7 21:44 runpilot2-wrapper.sh
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc       100 Feb  8 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 16:12:35] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 14:38 run_atlas
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc       105 Feb  8 14:38 job.xml
[2026-02-08 16:12:35] -rw-r--r-- 2 boinc boinc 505215554 Feb  8 14:38 EVNT.48318040._000239.pool.root.1
[2026-02-08 16:12:35] -rw-r--r-- 2 boinc boinc    597952 Feb  8 14:38 input.tar.gz
[2026-02-08 16:12:35] -rw-r--r-- 2 boinc boinc     15845 Feb  8 14:38 start_atlas.sh
[2026-02-08 16:12:35] drwxrwx--x 2 boinc boinc      4096 Feb  8 14:38 shared
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc         0 Feb  8 14:38 boinc_setup_complete
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc      6449 Feb  8 14:38 init_data.xml
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc         0 Feb  8 14:38 boinc_lockfile
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc      2538 Feb  8 14:38 pandaJob.out
[2026-02-08 16:12:35] -rw------- 1 boinc boinc   1009526 Feb  8 14:38 agis_schedconf.cvmfs.json
[2026-02-08 16:12:35] -rw------- 1 boinc boinc   1513088 Feb  8 14:38 agis_ddmendpoints.agis.ALL.json
[2026-02-08 16:12:35] -rw------- 1 boinc boinc       427 Feb  8 14:38 workernode_map.json
[2026-02-08 16:12:35] drwx------ 5 boinc boinc      4096 Feb  8 14:38 pilot3
[2026-02-08 16:12:35] -rw------- 1 boinc boinc 187021285 Feb  8 16:11 HITS.48318042._012463.pool.root.1
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc       530 Feb  8 16:11 boinc_task_state.xml
[2026-02-08 16:12:35] -rw------- 1 boinc boinc      1016 Feb  8 16:11 memory_monitor_summary.json
[2026-02-08 16:12:35] -rw------- 1 boinc boinc    296959 Feb  8 16:11 log.48318042._012463.job.log.tgz.1
[2026-02-08 16:12:35] -rw------- 1 boinc boinc      6312 Feb  8 16:11 heartbeat.json
[2026-02-08 16:12:35] -rw------- 1 boinc boinc        95 Feb  8 16:12 pilot_heartbeat.json
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc      8192 Feb  8 16:12 boinc_mmap_file
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc        27 Feb  8 16:12 wrapper_checkpoint.txt
[2026-02-08 16:12:35] -rw------- 1 boinc boinc      6318 Feb  8 16:12 pilotlog.txt
[2026-02-08 16:12:35] -rw------- 1 boinc boinc    813731 Feb  8 16:12 log.48318042._012463.job.log.1
[2026-02-08 16:12:35] -rw------- 1 boinc boinc       357 Feb  8 16:12 output.list
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc       620 Feb  8 16:12 runtime_log
[2026-02-08 16:12:35] -rw------- 1 boinc boinc   1126400 Feb  8 16:12 result.tar.gz
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc      8916 Feb  8 16:12 runtime_log.err
[2026-02-08 16:12:35] -rw------- 1 boinc boinc       661 Feb  8 16:12 iqCLDmhL488nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmD4bKDmtMsR2n.diag
[2026-02-08 16:12:35] -rw-r--r-- 1 boinc boinc     22199 Feb  8 16:12 stderr.txt
[2026-02-08 16:12:35] HITS file was successfully produced:
[2026-02-08 16:12:35] -rw------- 1 boinc boinc 187021285 Feb  8 16:11 shared/HITS.pool.root.1
[2026-02-08 16:12:35]  *** Contents of shared directory: ***
[2026-02-08 16:12:35] total 677724
[2026-02-08 16:12:35] -rw-r--r-- 2 boinc boinc 505215554 Feb  8 14:38 ATLAS.root_0
[2026-02-08 16:12:35] -rw-r--r-- 2 boinc boinc    597952 Feb  8 14:38 input.tar.gz
[2026-02-08 16:12:35] -rw-r--r-- 2 boinc boinc     15845 Feb  8 14:38 start_atlas.sh
[2026-02-08 16:12:35] -rw------- 1 boinc boinc 187021285 Feb  8 16:11 HITS.pool.root.1
[2026-02-08 16:12:35] -rw------- 1 boinc boinc   1126400 Feb  8 16:12 result.tar.gz
16:12:36 (837655): run_atlas exited; CPU time 16091.807053
16:12:36 (837655): called boinc_finish(0)

</stderr_txt>
]]>

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